RNA–Protein interactions for RNA: ENST00000619138.4

CNTNAP3B-215, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 3,840 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-215ENST00000619138 RNF185Q96GF1 192 aa10.62□□□□□ -0.71
CNTNAP3B-215ENST00000619138 PVRIGQ6DKI7 326 aa10.62□□□□□ -0.71
CNTNAP3B-215ENST00000619138 SVEP1Q4LDE5 3571 aa10.62□□□□□ -0.71
CNTNAP3B-215ENST00000619138 MRGPRG-AS1Q2M3A8 158 aa10.61□□□□□ -0.71
CNTNAP3B-215ENST00000619138 PHLDA3Q9Y5J5 127 aa10.61□□□□□ -0.71
CNTNAP3B-215ENST00000619138 XGP55808 180 aa10.61□□□□□ -0.71
CNTNAP3B-215ENST00000619138 LY6EQ16553 131 aa10.61□□□□□ -0.71
CNTNAP3B-215ENST00000619138 PHLDA1Q8WV24 401 aaPredicted RBP10.61□□□□□ -0.71
CNTNAP3B-215ENST00000619138 TEX36Q5VZQ5 186 aa10.6□□□□□ -0.71
CNTNAP3B-215ENST00000619138 PLEKHB2Q96CS7 222 aa10.6□□□□□ -0.71
CNTNAP3B-215ENST00000619138 RPL39LQ96EH5 51 aaKnown RBP10.6□□□□□ -0.71
CNTNAP3B-215ENST00000619138 MYMXA0A1B0GTQ4 84 aa10.6□□□□□ -0.71
CNTNAP3B-215ENST00000619138 ASH1LQ9NR48 2969 aaKnown RBP10.6□□□□□ -0.71
CNTNAP3B-215ENST00000619138 TSPAN13O95857 204 aa10.6□□□□□ -0.71
CNTNAP3B-215ENST00000619138 SRD5A1P18405 259 aa10.6□□□□□ -0.71
CNTNAP3B-215ENST00000619138 TMEM30BQ3MIR4 351 aa10.6□□□□□ -0.71
CNTNAP3B-215ENST00000619138 FBXL19-AS1Q494R0 122 aa10.6□□□□□ -0.71
CNTNAP3B-215ENST00000619138 LYRM7Q5U5X0 104 aa10.6□□□□□ -0.71
CNTNAP3B-215ENST00000619138 CFAP46Q8IYW2 2715 aa10.6□□□□□ -0.71
CNTNAP3B-215ENST00000619138 NBR2O15453 112 aa10.59□□□□□ -0.71
CNTNAP3B-215ENST00000619138 HERV-K104P63124 156 aa10.59□□□□□ -0.71
CNTNAP3B-215ENST00000619138 SRSF1Q07955 248 aaKnown RBP eCLIP10.59□□□□□ -0.71
CNTNAP3B-215ENST00000619138 Q8N8P6 123 aa10.59□□□□□ -0.71
CNTNAP3B-215ENST00000619138 BBC3Q96PG8 261 aaPredicted RBP10.59□□□□□ -0.71
CNTNAP3B-215ENST00000619138 TM2D2Q9BX73 214 aa10.59□□□□□ -0.71
CNTNAP3B-215ENST00000619138 CLEC19AQ6UXS0 136 aa10.59□□□□□ -0.71
CNTNAP3B-215ENST00000619138 NFE4Q86UQ8 179 aa10.59□□□□□ -0.71
CNTNAP3B-215ENST00000619138 HIGD1BQ9P298 99 aa10.59□□□□□ -0.71
CNTNAP3B-215ENST00000619138 OVOL3O00110 214 aa10.58□□□□□ -0.72
CNTNAP3B-215ENST00000619138 A0A087WX48 190 aa10.58□□□□□ -0.72
CNTNAP3B-215ENST00000619138 ADARB2-AS1A8MUL3 147 aa10.58□□□□□ -0.72
CNTNAP3B-215ENST00000619138 LGALS3P17931 250 aaKnown RBP10.58□□□□□ -0.72
CNTNAP3B-215ENST00000619138 H7C1H1 209 aa10.58□□□□□ -0.72
CNTNAP3B-215ENST00000619138 LYPD1Q8N2G4 141 aa10.58□□□□□ -0.72
CNTNAP3B-215ENST00000619138 C16orf92Q96LL3 132 aa10.58□□□□□ -0.72
CNTNAP3B-215ENST00000619138 U3KQK5 164 aa10.58□□□□□ -0.72
CNTNAP3B-215ENST00000619138 INS-IGF2F8WCM5 200 aa10.57□□□□□ -0.72
CNTNAP3B-215ENST00000619138 C1QTNF4Q9BXJ3 329 aa10.57□□□□□ -0.72
CNTNAP3B-215ENST00000619138 SCGB1A1P11684 91 aa10.57□□□□□ -0.72
CNTNAP3B-215ENST00000619138 SPATA25Q9BR10 227 aa10.57□□□□□ -0.72
CNTNAP3B-215ENST00000619138 Q6ZUT4 128 aa10.57□□□□□ -0.72
CNTNAP3B-215ENST00000619138 FLNCQ14315 2725 aa10.57□□□□□ -0.72
CNTNAP3B-215ENST00000619138 F8VRH5 84 aa10.56□□□□□ -0.72
CNTNAP3B-215ENST00000619138 C11orf21Q9P2W6 132 aa10.56□□□□□ -0.72
CNTNAP3B-215ENST00000619138 SMPXQ9UHP9 88 aa10.56□□□□□ -0.72
CNTNAP3B-215ENST00000619138 IGF1P05019 195 aa10.56□□□□□ -0.72
CNTNAP3B-215ENST00000619138 LGALS1P09382 135 aaKnown RBP10.56□□□□□ -0.72
CNTNAP3B-215ENST00000619138 AGPAT4-IT1Q9H0P7 198 aa10.56□□□□□ -0.72
CNTNAP3B-215ENST00000619138 PLNP26678 52 aa10.55□□□□□ -0.72
CNTNAP3B-215ENST00000619138 C2orf66Q6UXQ4 117 aa10.55□□□□□ -0.72
CNTNAP3B-215ENST00000619138 LINC00574Q9H8X3 128 aa10.55□□□□□ -0.72
CNTNAP3B-215ENST00000619138 A0A1W2PPR1 153 aa10.55□□□□□ -0.72
CNTNAP3B-215ENST00000619138 IGLC6P0CF74 106 aa10.55□□□□□ -0.72
CNTNAP3B-215ENST00000619138 C15orf32Q32M92 178 aa10.55□□□□□ -0.72
CNTNAP3B-215ENST00000619138 MRPL23Q16540 153 aaKnown RBP10.54□□□□□ -0.72
CNTNAP3B-215ENST00000619138 MORN3Q6PF18 240 aaPredicted RBP10.54□□□□□ -0.72
CNTNAP3B-215ENST00000619138 MAPK1IP1LQ8NDC0 245 aa10.54□□□□□ -0.72
CNTNAP3B-215ENST00000619138 DPM3Q9P2X0 92 aa10.54□□□□□ -0.72
CNTNAP3B-215ENST00000619138 TRPT1Q86TN4 253 aaKnown RBP10.54□□□□□ -0.72
CNTNAP3B-215ENST00000619138 DUX5Q96PT3 197 aa10.54□□□□□ -0.72
CNTNAP3B-215ENST00000619138 PRRC2AP48634 2157 aaKnown RBP10.54□□□□□ -0.72
CNTNAP3B-215ENST00000619138 ZNF56Q15929 161 aa10.54□□□□□ -0.72
CNTNAP3B-215ENST00000619138 LINC00311Q8N616 119 aa10.54□□□□□ -0.72
CNTNAP3B-215ENST00000619138 NTN5Q8WTR8 489 aaPredicted RBP10.54□□□□□ -0.72
CNTNAP3B-215ENST00000619138 LINC00477Q96M19 166 aa10.54□□□□□ -0.72
CNTNAP3B-215ENST00000619138 TCL1BO95988 128 aa10.53□□□□□ -0.72
CNTNAP3B-215ENST00000619138 ANKRD29Q8N6D5 301 aa10.53□□□□□ -0.72
CNTNAP3B-215ENST00000619138 HOXB4P17483 251 aaPredicted RBP10.53□□□□□ -0.72
CNTNAP3B-215ENST00000619138 SMCPP49901 116 aaPredicted RBP10.53□□□□□ -0.72
CNTNAP3B-215ENST00000619138 SMAD5-AS1Q9Y6J3 95 aa10.53□□□□□ -0.72
CNTNAP3B-215ENST00000619138 FHL3Q13643 280 aa10.53□□□□□ -0.72
CNTNAP3B-215ENST00000619138 PDE6HQ13956 83 aa10.53□□□□□ -0.72
CNTNAP3B-215ENST00000619138 A0A087WWL8 130 aa10.52□□□□□ -0.72
CNTNAP3B-215ENST00000619138 G3V318 75 aa10.52□□□□□ -0.72
CNTNAP3B-215ENST00000619138 DUSP14O95147 198 aaKnown RBP10.52□□□□□ -0.72
CNTNAP3B-215ENST00000619138 RNASE4P34096 147 aaKnown RBP10.52□□□□□ -0.72
CNTNAP3B-215ENST00000619138 C10orf126Q8N4M7 172 aa10.52□□□□□ -0.72
CNTNAP3B-215ENST00000619138 FANCD2OSQ96PS1 177 aa10.52□□□□□ -0.72
CNTNAP3B-215ENST00000619138 SMIM2Q9BVW6 85 aa10.52□□□□□ -0.72
CNTNAP3B-215ENST00000619138 CDIP1Q9H305 208 aa10.52□□□□□ -0.72
CNTNAP3B-215ENST00000619138 GAGE5Q13069 117 aa10.52□□□□□ -0.73
CNTNAP3B-215ENST00000619138 GAGE6Q13070 117 aa10.52□□□□□ -0.73
CNTNAP3B-215ENST00000619138 C5orf64Q2M2E5 130 aa10.52□□□□□ -0.73
CNTNAP3B-215ENST00000619138 PPDPFLQ8WWR9 84 aa10.52□□□□□ -0.73
CNTNAP3B-215ENST00000619138 F6UB75 175 aa10.52□□□□□ -0.73
CNTNAP3B-215ENST00000619138 IGLV1-47P01700 117 aa10.52□□□□□ -0.73
CNTNAP3B-215ENST00000619138 PAX8Q06710 450 aa10.52□□□□□ -0.73
CNTNAP3B-215ENST00000619138 SUMO2P61956 95 aaKnown RBP10.51□□□□□ -0.73
CNTNAP3B-215ENST00000619138 RPL39P62891 51 aaKnown RBP10.51□□□□□ -0.73
CNTNAP3B-215ENST00000619138 NRGNQ92686 78 aa10.51□□□□□ -0.73
CNTNAP3B-215ENST00000619138 TRBV7-3A0A075B6L6 115 aa10.51□□□□□ -0.73
CNTNAP3B-215ENST00000619138 MRPS12O15235 138 aaKnown RBP10.51□□□□□ -0.73
CNTNAP3B-215ENST00000619138 HECTD1Q9ULT8 2610 aa10.51□□□□□ -0.73
CNTNAP3B-215ENST00000619138 IGHV3-11P01762 117 aa10.51□□□□□ -0.73
CNTNAP3B-215ENST00000619138 ZNF625Q96I27 306 aaPredicted RBP10.51□□□□□ -0.73
CNTNAP3B-215ENST00000619138 TRAV8-4A0A0B4J246 113 aa10.5□□□□□ -0.73
CNTNAP3B-215ENST00000619138 CRYGBP07316 175 aa10.5□□□□□ -0.73
CNTNAP3B-215ENST00000619138 RNASE1P07998 156 aaKnown RBP10.5□□□□□ -0.73
CNTNAP3B-215ENST00000619138 CTSGP08311 255 aa10.5□□□□□ -0.73
CNTNAP3B-215ENST00000619138 CFAP126Q5VTH2 177 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms