RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 ODF3Q96PU9 254 aa2.58□□□□□ -2
LPP-220ENST00000617246 FABP2P12104 132 aa2.58□□□□□ -2
LPP-220ENST00000617246 POM121L12Q8N7R1 296 aa2.58□□□□□ -2
LPP-220ENST00000617246 KLK12Q9UKR0 248 aa2.58□□□□□ -2
LPP-220ENST00000617246 LSM4Q9Y4Z0 139 aaKnown RBP2.58□□□□□ -2
LPP-220ENST00000617246 FABP4P15090 132 aa2.58□□□□□ -2
LPP-220ENST00000617246 Q8N9W7 124 aa2.58□□□□□ -2
LPP-220ENST00000617246 CCDC140Q96MF4 163 aa2.58□□□□□ -2
LPP-220ENST00000617246 SMR3AQ99954 134 aa2.58□□□□□ -2
LPP-220ENST00000617246 KPRPQ5T749 579 aaPredicted RBP2.58□□□□□ -2
LPP-220ENST00000617246 FLVCR1-AS1Q8TAF5 88 aa2.58□□□□□ -2
LPP-220ENST00000617246 SFTA3P0C7M3 94 aa2.58□□□□□ -2
LPP-220ENST00000617246 IGHV4-28A0A0C4DH34 117 aa2.58□□□□□ -2
LPP-220ENST00000617246 XGP55808 180 aa2.58□□□□□ -2
LPP-220ENST00000617246 GAGE2EQ4V326 116 aa2.58□□□□□ -2
LPP-220ENST00000617246 ATP5L2Q7Z4Y8 100 aa2.58□□□□□ -2
LPP-220ENST00000617246 TMEM61Q8N0U2 210 aa2.58□□□□□ -2
LPP-220ENST00000617246 GAGE2DQ9UEU5 116 aa2.58□□□□□ -2
LPP-220ENST00000617246 NMSQ5H8A3 153 aa2.58□□□□□ -2
LPP-220ENST00000617246 ESDP10768 282 aa2.58□□□□□ -2
LPP-220ENST00000617246 DIRC1Q969H9 104 aa2.58□□□□□ -2
LPP-220ENST00000617246 TRBV10-1A0A0K0K1A3 114 aa2.58□□□□□ -2
LPP-220ENST00000617246 H0Y9J4 135 aa2.58□□□□□ -2
LPP-220ENST00000617246 SPTA1P02549 2419 aa2.58□□□□□ -2
LPP-220ENST00000617246 H3BRN7 92 aa2.57□□□□□ -2
LPP-220ENST00000617246 CGAP01215 116 aa2.57□□□□□ -2
LPP-220ENST00000617246 LINC01620Q4KN68 170 aa2.57□□□□□ -2
LPP-220ENST00000617246 SCRT1Q9BWW7 348 aa2.57□□□□□ -2
LPP-220ENST00000617246 TRAV12-2A0A075B6T6 113 aa2.57□□□□□ -2
LPP-220ENST00000617246 TRAV13-1A0A0B4J241 112 aa2.57□□□□□ -2
LPP-220ENST00000617246 ZNF506Q5JVG8 444 aa2.57□□□□□ -2
LPP-220ENST00000617246 SPTBN1Q01082 2364 aaKnown RBP2.57□□□□□ -2
LPP-220ENST00000617246 ETV2O00321 342 aaPredicted RBP2.57□□□□□ -2
LPP-220ENST00000617246 KRTAP24-1Q3LI83 254 aa2.57□□□□□ -2
LPP-220ENST00000617246 RETNQ9HD89 108 aa2.57□□□□□ -2
LPP-220ENST00000617246 PMS2P5A8MQ11 134 aa2.57□□□□□ -2
LPP-220ENST00000617246 RPL23P62829 140 aaKnown RBP2.57□□□□□ -2
LPP-220ENST00000617246 C4orf51C9J302 202 aa2.57□□□□□ -2
LPP-220ENST00000617246 MIC13Q5XKP0 118 aa2.57□□□□□ -2
LPP-220ENST00000617246 MED14OSP0DP75 135 aa2.57□□□□□ -2
LPP-220ENST00000617246 CRYBB3P26998 211 aa2.57□□□□□ -2
LPP-220ENST00000617246 WFDC6Q9BQY6 131 aa2.57□□□□□ -2
LPP-220ENST00000617246 CTSZQ9UBR2 303 aa2.57□□□□□ -2
LPP-220ENST00000617246 CR1P17927 2039 aa2.57□□□□□ -2
LPP-220ENST00000617246 PFN2P35080 140 aa2.57□□□□□ -2
LPP-220ENST00000617246 C1orf100Q5SVJ3 147 aa2.57□□□□□ -2
LPP-220ENST00000617246 LELP1Q5T871 98 aa2.57□□□□□ -2
LPP-220ENST00000617246 GVQW1Q8N7I0 195 aa2.57□□□□□ -2
LPP-220ENST00000617246 TRACP01848 142 aa2.57□□□□□ -2
LPP-220ENST00000617246 GCHFRP30047 84 aa2.57□□□□□ -2
LPP-220ENST00000617246 TMEM258P61165 79 aa2.57□□□□□ -2
LPP-220ENST00000617246 ZNF664Q8N3J9 261 aa2.57□□□□□ -2
LPP-220ENST00000617246 C14orf144Q96I85 54 aa2.57□□□□□ -2
LPP-220ENST00000617246 SPANXA1Q9NS26 97 aa2.57□□□□□ -2
LPP-220ENST00000617246 PCNX1Q96RV3 2341 aa2.57□□□□□ -2
LPP-220ENST00000617246 SOCS3O14543 225 aa2.57□□□□□ -2
LPP-220ENST00000617246 SLC17A3O00476 420 aa2.57□□□□□ -2
LPP-220ENST00000617246 NDUFA3O95167 84 aa2.57□□□□□ -2
LPP-220ENST00000617246 IGHV3-16A0A0C4DH30 117 aa2.57□□□□□ -2
LPP-220ENST00000617246 PUSL1Q8N0Z8 303 aaKnown RBP2.57□□□□□ -2
LPP-220ENST00000617246 BAALCQ8WXS3 180 aa2.57□□□□□ -2
LPP-220ENST00000617246 IGKV1-27A0A075B6S5 117 aa2.56□□□□□ -2
LPP-220ENST00000617246 NCR3O14931 201 aa2.56□□□□□ -2
LPP-220ENST00000617246 CBLN2Q8IUK8 224 aa2.56□□□□□ -2
LPP-220ENST00000617246 BCL6BQ8N143 479 aaPredicted RBP2.56□□□□□ -2
LPP-220ENST00000617246 BBC3Q96PG8 261 aaPredicted RBP2.56□□□□□ -2
LPP-220ENST00000617246 PARD6GQ9BYG4 376 aaPredicted RBP2.56□□□□□ -2
LPP-220ENST00000617246 CRIP2P52943 208 aaPredicted RBP2.56□□□□□ -2
LPP-220ENST00000617246 C19orf71A6NCJ1 209 aa2.56□□□□□ -2
LPP-220ENST00000617246 A8MWP6 167 aa2.56□□□□□ -2
LPP-220ENST00000617246 VPREB1P12018 145 aa2.56□□□□□ -2
LPP-220ENST00000617246 JMJD7-PLA2G4BH0Y9G9 81 aa2.56□□□□□ -2
LPP-220ENST00000617246 MPC2O95563 127 aa2.56□□□□□ -2
LPP-220ENST00000617246 HIGD2BQ4VC39 106 aa2.56□□□□□ -2
LPP-220ENST00000617246 ANKRD29Q8N6D5 301 aa2.56□□□□□ -2
LPP-220ENST00000617246 MAPKAPK5-AS1Q8N8E1 139 aa2.56□□□□□ -2
LPP-220ENST00000617246 DAND5Q8N907 189 aa2.56□□□□□ -2
LPP-220ENST00000617246 TRBV7-3A0A075B6L6 115 aa2.56□□□□□ -2
LPP-220ENST00000617246 IGLV2-11P01706 119 aa2.56□□□□□ -2
LPP-220ENST00000617246 GNB1LQ9BYB4 327 aa2.56□□□□□ -2
LPP-220ENST00000617246 ZNF581Q9P0T4 197 aa2.56□□□□□ -2
LPP-220ENST00000617246 NCOR1O75376 2440 aa2.56□□□□□ -2
LPP-220ENST00000617246 IL15RAQ13261 267 aa2.56□□□□□ -2
LPP-220ENST00000617246 MED13LQ71F56 2210 aa2.56□□□□□ -2
LPP-220ENST00000617246 KRTAP21-3Q3LHN1 58 aa2.56□□□□□ -2
LPP-220ENST00000617246 C10orf25Q5T742 122 aa2.56□□□□□ -2
LPP-220ENST00000617246 STPG4Q8N801 248 aa2.56□□□□□ -2
LPP-220ENST00000617246 PRB4P10163 310 aaPredicted RBP2.56□□□□□ -2
LPP-220ENST00000617246 ZNF345Q14585 488 aa2.56□□□□□ -2
LPP-220ENST00000617246 TRAV13-2A0A0B4J235 113 aa2.56□□□□□ -2
LPP-220ENST00000617246 H3BTX0 84 aa2.56□□□□□ -2
LPP-220ENST00000617246 LINC00114Q6XXX2 140 aa2.56□□□□□ -2
LPP-220ENST00000617246 TRBV6-4A0A1B0GX49 114 aa2.56□□□□□ -2
LPP-220ENST00000617246 REG3AQ06141 175 aa2.56□□□□□ -2
LPP-220ENST00000617246 IMUPQ9GZP8 106 aa2.56□□□□□ -2
LPP-220ENST00000617246 C17orf58Q2M2W7 97 aa2.56□□□□□ -2
LPP-220ENST00000617246 HIGD2AQ9BW72 106 aa2.56□□□□□ -2
LPP-220ENST00000617246 IGLV2-8P01709 118 aa2.56□□□□□ -2
LPP-220ENST00000617246 NANOS2P60321 138 aaKnown RBP2.56□□□□□ -2
LPP-220ENST00000617246 PRB3Q04118 309 aaPredicted RBP2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms