RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 DNAJC9-AS1A6NH13 148 aa11.72□□□□□ -0.53
NR1H3-235ENST00000616973 FOXI2Q6ZQN5 318 aa11.72□□□□□ -0.53
NR1H3-235ENST00000616973 MUC4Q99102 2169 aa11.72□□□□□ -0.53
NR1H3-235ENST00000616973 H0Y8G0 127 aa11.72□□□□□ -0.53
NR1H3-235ENST00000616973 TSPOP30536 169 aa11.72□□□□□ -0.53
NR1H3-235ENST00000616973 KRTAP1-1Q07627 177 aa11.72□□□□□ -0.53
NR1H3-235ENST00000616973 POM121L12Q8N7R1 296 aa11.72□□□□□ -0.53
NR1H3-235ENST00000616973 OR1N2Q8NGR9 330 aa11.72□□□□□ -0.53
NR1H3-235ENST00000616973 DPF1Q92782 380 aa11.72□□□□□ -0.53
NR1H3-235ENST00000616973 MCRIP2Q9BUT9 160 aaKnown RBP11.72□□□□□ -0.53
NR1H3-235ENST00000616973 TRAV26-2A0A0B4J265 109 aa11.71□□□□□ -0.53
NR1H3-235ENST00000616973 CD5LO43866 347 aa11.71□□□□□ -0.53
NR1H3-235ENST00000616973 FXYD7P58549 80 aa11.71□□□□□ -0.53
NR1H3-235ENST00000616973 DEFB136Q30KP8 78 aa11.71□□□□□ -0.53
NR1H3-235ENST00000616973 OR11H1Q8NG94 326 aa11.71□□□□□ -0.53
NR1H3-235ENST00000616973 AP1S3Q96PC3 154 aa11.71□□□□□ -0.53
NR1H3-235ENST00000616973 TEX15Q9BXT5 2789 aa11.7□□□□□ -0.54
NR1H3-235ENST00000616973 TRAV12-3A0A0B4J271 114 aa11.7□□□□□ -0.54
NR1H3-235ENST00000616973 OR9G4Q8NGQ1 327 aa11.7□□□□□ -0.54
NR1H3-235ENST00000616973 CDKN1BP46527 198 aa11.7□□□□□ -0.54
NR1H3-235ENST00000616973 C20orf78Q9BR46 151 aa11.7□□□□□ -0.54
NR1H3-235ENST00000616973 GOLT1BQ9Y3E0 138 aa11.7□□□□□ -0.54
NR1H3-235ENST00000616973 C14orf178Q8N769 122 aaPredicted RBP11.69□□□□□ -0.54
NR1H3-235ENST00000616973 PMCHL2Q9BQD1 86 aa11.69□□□□□ -0.54
NR1H3-235ENST00000616973 A8MTW9 85 aa11.68□□□□□ -0.54
NR1H3-235ENST00000616973 LAGE3Q14657 143 aa11.68□□□□□ -0.54
NR1H3-235ENST00000616973 AMTNQ6UX39 209 aa11.68□□□□□ -0.54
NR1H3-235ENST00000616973 KLHL30-AS1Q8NEE0 82 aa11.68□□□□□ -0.54
NR1H3-235ENST00000616973 TMEM158Q8WZ71 300 aa11.68□□□□□ -0.54
NR1H3-235ENST00000616973 SMIM2Q9BVW6 85 aa11.68□□□□□ -0.54
NR1H3-235ENST00000616973 KIF25-AS1Q9Y6Z4 181 aa11.68□□□□□ -0.54
NR1H3-235ENST00000616973 K7EMI3 77 aa11.68□□□□□ -0.54
NR1H3-235ENST00000616973 SPRY2O43597 315 aa11.68□□□□□ -0.54
NR1H3-235ENST00000616973 PPP1R17O96001 155 aa11.68□□□□□ -0.54
NR1H3-235ENST00000616973 CD7P09564 240 aa11.68□□□□□ -0.54
NR1H3-235ENST00000616973 RASL10AQ92737 203 aa11.68□□□□□ -0.54
NR1H3-235ENST00000616973 C9orf85Q96MD7 179 aa11.68□□□□□ -0.54
NR1H3-235ENST00000616973 AGRNO00468 2067 aa11.68□□□□□ -0.54
NR1H3-235ENST00000616973 KHDC1LQ5JSQ8 128 aa11.67□□□□□ -0.54
NR1H3-235ENST00000616973 DLX4Q92988 240 aaPredicted RBP11.67□□□□□ -0.54
NR1H3-235ENST00000616973 ESM1Q9NQ30 184 aa11.67□□□□□ -0.54
NR1H3-235ENST00000616973 MXRA5Q9NR99 2828 aa11.67□□□□□ -0.54
NR1H3-235ENST00000616973 IGHV3-16A0A0C4DH30 117 aa11.66□□□□□ -0.54
NR1H3-235ENST00000616973 SUMO2P61956 95 aaKnown RBP11.66□□□□□ -0.54
NR1H3-235ENST00000616973 SLC25A34Q6PIV7 304 aa11.66□□□□□ -0.54
NR1H3-235ENST00000616973 ITPR3Q14573 2671 aa11.66□□□□□ -0.54
NR1H3-235ENST00000616973 IGHV1OR15-1A0A075B7D0 117 aa11.66□□□□□ -0.54
NR1H3-235ENST00000616973 ATP5LO75964 103 aa11.66□□□□□ -0.54
NR1H3-235ENST00000616973 IGKV3-20P01619 116 aa11.66□□□□□ -0.54
NR1H3-235ENST00000616973 LINC00315P59091 139 aa11.66□□□□□ -0.54
NR1H3-235ENST00000616973 SPINK13Q1W4C9 94 aa11.66□□□□□ -0.54
NR1H3-235ENST00000616973 YAE1D1Q9NRH1 226 aa11.66□□□□□ -0.54
NR1H3-235ENST00000616973 TRAV12-2A0A075B6T6 113 aa11.65□□□□□ -0.54
NR1H3-235ENST00000616973 MGPP08493 103 aa11.65□□□□□ -0.54
NR1H3-235ENST00000616973 SMIM17P0DL12 118 aa11.65□□□□□ -0.54
NR1H3-235ENST00000616973 CBY1Q9Y3M2 126 aa11.65□□□□□ -0.54
NR1H3-235ENST00000616973 HLA-DRB4P13762 266 aa11.64□□□□□ -0.55
NR1H3-235ENST00000616973 COL5A1-AS1Q5SY13 56 aa11.64□□□□□ -0.55
NR1H3-235ENST00000616973 TMEM61Q8N0U2 210 aa11.64□□□□□ -0.55
NR1H3-235ENST00000616973 C18orf15Q96N68 181 aa11.64□□□□□ -0.55
NR1H3-235ENST00000616973 DUX3Q96PT4 197 aa11.64□□□□□ -0.55
NR1H3-235ENST00000616973 HLA-DRB4X5D2U9 266 aa11.64□□□□□ -0.55
NR1H3-235ENST00000616973 COX8AP10176 69 aa11.64□□□□□ -0.55
NR1H3-235ENST00000616973 DEFB131AP59861 70 aa11.64□□□□□ -0.55
NR1H3-235ENST00000616973 RPL32P62910 135 aaKnown RBP11.64□□□□□ -0.55
NR1H3-235ENST00000616973 SCGB2A2Q13296 93 aa11.64□□□□□ -0.55
NR1H3-235ENST00000616973 DEFB114Q30KQ6 69 aa11.64□□□□□ -0.55
NR1H3-235ENST00000616973 ORMDL2Q53FV1 153 aa11.64□□□□□ -0.55
NR1H3-235ENST00000616973 C16orf95Q9H693 158 aa11.64□□□□□ -0.55
NR1H3-235ENST00000616973 ZMAT4Q9H898 229 aa11.64□□□□□ -0.55
NR1H3-235ENST00000616973 RNASE1P07998 156 aaKnown RBP11.63□□□□□ -0.55
NR1H3-235ENST00000616973 BATFQ16520 125 aa11.63□□□□□ -0.55
NR1H3-235ENST00000616973 Q8N1Y9 231 aa11.63□□□□□ -0.55
NR1H3-235ENST00000616973 SYT8Q8NBV8 401 aa11.63□□□□□ -0.55
NR1H3-235ENST00000616973 DYNLRB2Q8TF09 96 aa11.63□□□□□ -0.55
NR1H3-235ENST00000616973 RPL39LQ96EH5 51 aaKnown RBP11.63□□□□□ -0.55
NR1H3-235ENST00000616973 GCN1Q92616 2671 aaKnown RBP11.63□□□□□ -0.55
NR1H3-235ENST00000616973 H3BMM0 161 aa11.62□□□□□ -0.55
NR1H3-235ENST00000616973 FHL3Q13643 280 aa11.62□□□□□ -0.55
NR1H3-235ENST00000616973 ODF1Q14990 250 aa11.62□□□□□ -0.55
NR1H3-235ENST00000616973 TRGV11A0A075B6L2 103 aa11.62□□□□□ -0.55
NR1H3-235ENST00000616973 KNCNA6PVL3 124 aa11.62□□□□□ -0.55
NR1H3-235ENST00000616973 GAGE1Q13065 139 aa11.62□□□□□ -0.55
NR1H3-235ENST00000616973 RAX2Q96IS3 184 aa11.62□□□□□ -0.55
NR1H3-235ENST00000616973 TMEM160Q9NX00 188 aa11.62□□□□□ -0.55
NR1H3-235ENST00000616973 MDFICQ9P1T7 246 aa11.62□□□□□ -0.55
NR1H3-235ENST00000616973 TRAV25A0A0B4J276 109 aa11.61□□□□□ -0.55
NR1H3-235ENST00000616973 PRSS1P07477 247 aa11.61□□□□□ -0.55
NR1H3-235ENST00000616973 ANKRD39Q53RE8 183 aa11.61□□□□□ -0.55
NR1H3-235ENST00000616973 SPAG8Q99932 426 aaPredicted RBP11.61□□□□□ -0.55
NR1H3-235ENST00000616973 DKK2Q9UBU2 259 aa11.61□□□□□ -0.55
NR1H3-235ENST00000616973 PDZD2O15018 2839 aa11.61□□□□□ -0.55
NR1H3-235ENST00000616973 NUDT3O95989 172 aa11.6□□□□□ -0.55
NR1H3-235ENST00000616973 STPG4Q8N801 248 aa11.6□□□□□ -0.55
NR1H3-235ENST00000616973 MAP6D1Q9H9H5 199 aa11.6□□□□□ -0.55
NR1H3-235ENST00000616973 TOMM6Q96B49 74 aa11.6□□□□□ -0.55
NR1H3-235ENST00000616973 JPT2Q9H910 190 aa11.6□□□□□ -0.55
NR1H3-235ENST00000616973 ZNF469Q96JG9 3925 aaPredicted RBP11.6□□□□□ -0.55
NR1H3-235ENST00000616973 FASNP49327 2511 aaKnown RBP11.59□□□□□ -0.55
NR1H3-235ENST00000616973 CD28P10747 220 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms