RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 DLX4Q92988 240 aaPredicted RBP7.27□□□□□ -1.25
CLTCL1-208ENST00000615606 MRPL36Q9P0J6 103 aaKnown RBP7.27□□□□□ -1.25
CLTCL1-208ENST00000615606 EGR2P11161 476 aaPredicted RBP7.27□□□□□ -1.25
CLTCL1-208ENST00000615606 Q0VG73 95 aa7.27□□□□□ -1.25
CLTCL1-208ENST00000615606 SHISA2Q6UWI4 295 aa7.27□□□□□ -1.25
CLTCL1-208ENST00000615606 Q6ZSV7 163 aa7.27□□□□□ -1.25
CLTCL1-208ENST00000615606 A0A087X0K7 114 aa7.27□□□□□ -1.25
CLTCL1-208ENST00000615606 LINC01548A6NM66 108 aa7.27□□□□□ -1.25
CLTCL1-208ENST00000615606 TRBV12-3P01733 135 aa7.27□□□□□ -1.25
CLTCL1-208ENST00000615606 MORN5Q5VZ52 161 aa7.27□□□□□ -1.25
CLTCL1-208ENST00000615606 UNQ9165/PRO28630Q6UXU0 137 aa7.27□□□□□ -1.25
CLTCL1-208ENST00000615606 TMEM61Q8N0U2 210 aa7.27□□□□□ -1.25
CLTCL1-208ENST00000615606 LYPD6BQ8NI32 183 aa7.27□□□□□ -1.25
CLTCL1-208ENST00000615606 FAM167A-AS1Q96KT0 104 aa7.27□□□□□ -1.25
CLTCL1-208ENST00000615606 NAA38Q9BRA0 125 aaKnown RBP7.27□□□□□ -1.25
CLTCL1-208ENST00000615606 CCDC140Q96MF4 163 aa7.26□□□□□ -1.25
CLTCL1-208ENST00000615606 C20orf78Q9BR46 151 aa7.26□□□□□ -1.25
CLTCL1-208ENST00000615606 ANAPC13Q9BS18 74 aa7.26□□□□□ -1.25
CLTCL1-208ENST00000615606 IGKV1OR2-108A0A075B7D4 117 aa7.26□□□□□ -1.25
CLTCL1-208ENST00000615606 MYMXA0A1B0GTQ4 84 aa7.26□□□□□ -1.25
CLTCL1-208ENST00000615606 MPV17L2Q567V2 206 aa7.26□□□□□ -1.25
CLTCL1-208ENST00000615606 TIMM21Q9BVV7 248 aa7.26□□□□□ -1.25
CLTCL1-208ENST00000615606 ERG28Q9UKR5 140 aa7.26□□□□□ -1.25
CLTCL1-208ENST00000615606 ATP5G1P05496 136 aa7.26□□□□□ -1.25
CLTCL1-208ENST00000615606 CRYGBP07316 175 aa7.26□□□□□ -1.25
CLTCL1-208ENST00000615606 BRWD1-AS2P59051 145 aa7.26□□□□□ -1.25
CLTCL1-208ENST00000615606 S100A7L2Q5SY68 101 aa7.26□□□□□ -1.25
CLTCL1-208ENST00000615606 SMIM2Q9BVW6 85 aa7.26□□□□□ -1.25
CLTCL1-208ENST00000615606 PGPEP1Q9NXJ5 209 aa7.26□□□□□ -1.25
CLTCL1-208ENST00000615606 NAV3Q8IVL0 2385 aa7.26□□□□□ -1.25
CLTCL1-208ENST00000615606 LGALS9O00182 355 aa7.26□□□□□ -1.25
CLTCL1-208ENST00000615606 GAGE6Q13070 117 aa7.26□□□□□ -1.25
CLTCL1-208ENST00000615606 C9orf47Q6ZRZ4 202 aa7.26□□□□□ -1.25
CLTCL1-208ENST00000615606 MRPL52Q86TS9 123 aaKnown RBP7.26□□□□□ -1.25
CLTCL1-208ENST00000615606 KMT2EQ8IZD2 1858 aa7.25□□□□□ -1.25
CLTCL1-208ENST00000615606 IGHV1-24A0A0C4DH33 117 aa7.25□□□□□ -1.25
CLTCL1-208ENST00000615606 IGHV3-38A0A0C4DH36 116 aa7.25□□□□□ -1.25
CLTCL1-208ENST00000615606 EREGO14944 169 aa7.25□□□□□ -1.25
CLTCL1-208ENST00000615606 EIF4EBP1Q13541 118 aaPredicted RBP7.25□□□□□ -1.25
CLTCL1-208ENST00000615606 C18orf32Q8TCD1 76 aa7.25□□□□□ -1.25
CLTCL1-208ENST00000615606 TRAV26-2A0A0B4J265 109 aa7.25□□□□□ -1.25
CLTCL1-208ENST00000615606 UBE2V1Q13404 147 aa7.25□□□□□ -1.25
CLTCL1-208ENST00000615606 KLF5Q13887 457 aaPredicted RBP7.25□□□□□ -1.25
CLTCL1-208ENST00000615606 ZC2HC1BQ5TFG8 222 aa7.25□□□□□ -1.25
CLTCL1-208ENST00000615606 ZNF561-AS1K7EIQ3 104 aa7.25□□□□□ -1.25
CLTCL1-208ENST00000615606 C1orf229Q6ZS94 237 aaPredicted RBP7.25□□□□□ -1.25
CLTCL1-208ENST00000615606 C20orf144Q9BQM9 153 aa7.25□□□□□ -1.25
CLTCL1-208ENST00000615606 SONP18583 2426 aaKnown RBP7.25□□□□□ -1.25
CLTCL1-208ENST00000615606 SH2D6Q7Z4S9 175 aa7.25□□□□□ -1.25
CLTCL1-208ENST00000615606 CEP295Q9C0D2 2601 aa7.24□□□□□ -1.25
CLTCL1-208ENST00000615606 HLA-DRB4P13762 266 aa7.24□□□□□ -1.25
CLTCL1-208ENST00000615606 PMVKQ15126 192 aa7.24□□□□□ -1.25
CLTCL1-208ENST00000615606 PRIMA1Q86XR5 153 aa7.24□□□□□ -1.25
CLTCL1-208ENST00000615606 HLA-DRB4X5D2U9 266 aa7.24□□□□□ -1.25
CLTCL1-208ENST00000615606 A0A0J9YY99 117 aa7.24□□□□□ -1.25
CLTCL1-208ENST00000615606 K7EN84 100 aa7.24□□□□□ -1.25
CLTCL1-208ENST00000615606 HILS1P60008 231 aa7.24□□□□□ -1.25
CLTCL1-208ENST00000615606 C10orf91Q5T1B1 145 aa7.24□□□□□ -1.25
CLTCL1-208ENST00000615606 JPT2Q9H910 190 aa7.24□□□□□ -1.25
CLTCL1-208ENST00000615606 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.23□□□□□ -1.25
CLTCL1-208ENST00000615606 PSMG3-AS1Q96PY0 264 aa7.23□□□□□ -1.25
CLTCL1-208ENST00000615606 C11orf1Q9H5F2 150 aa7.23□□□□□ -1.25
CLTCL1-208ENST00000615606 IGLC2P0DOY2 106 aa7.23□□□□□ -1.25
CLTCL1-208ENST00000615606 KRTAP10-9P60411 292 aa7.23□□□□□ -1.25
CLTCL1-208ENST00000615606 POLR3KQ9Y2Y1 108 aaPredicted RBP7.23□□□□□ -1.25
CLTCL1-208ENST00000615606 IGKV1D-37A0A075B6S9 117 aa7.23□□□□□ -1.25
CLTCL1-208ENST00000615606 A0A096LPF7 62 aa7.23□□□□□ -1.25
CLTCL1-208ENST00000615606 MRPL23Q16540 153 aaKnown RBP7.23□□□□□ -1.25
CLTCL1-208ENST00000615606 HIVEP3Q5T1R4 2406 aa7.23□□□□□ -1.25
CLTCL1-208ENST00000615606 PRAC2D3DTV9 90 aa7.23□□□□□ -1.25
CLTCL1-208ENST00000615606 NPC2P61916 151 aa7.23□□□□□ -1.25
CLTCL1-208ENST00000615606 ATXN8Q156A1 80 aa7.23□□□□□ -1.25
CLTCL1-208ENST00000615606 DNAJC30Q96LL9 226 aa7.23□□□□□ -1.25
CLTCL1-208ENST00000615606 CHAC1Q9BUX1 264 aa7.23□□□□□ -1.25
CLTCL1-208ENST00000615606 ICOSQ9Y6W8 199 aa7.23□□□□□ -1.25
CLTCL1-208ENST00000615606 A0A0J9YX75 114 aa7.22□□□□□ -1.25
CLTCL1-208ENST00000615606 NPYP01303 97 aa7.22□□□□□ -1.25
CLTCL1-208ENST00000615606 ANGP03950 147 aaKnown RBP7.22□□□□□ -1.25
CLTCL1-208ENST00000615606 GAGE2BQ13066 116 aa7.22□□□□□ -1.25
CLTCL1-208ENST00000615606 GAGE2EQ4V326 116 aa7.22□□□□□ -1.25
CLTCL1-208ENST00000615606 GAGE2DQ9UEU5 116 aa7.22□□□□□ -1.25
CLTCL1-208ENST00000615606 EML5Q05BV3 1969 aa7.22□□□□□ -1.25
CLTCL1-208ENST00000615606 TRAV8-4A0A0B4J246 113 aa7.22□□□□□ -1.25
CLTCL1-208ENST00000615606 ADAMTSL5Q6ZMM2 481 aa7.22□□□□□ -1.25
CLTCL1-208ENST00000615606 Q8N6K4 173 aa7.22□□□□□ -1.25
CLTCL1-208ENST00000615606 MAP6D1Q9H9H5 199 aa7.22□□□□□ -1.25
CLTCL1-208ENST00000615606 CRLF1O75462 422 aa7.22□□□□□ -1.25
CLTCL1-208ENST00000615606 DEFB135Q30KP9 77 aa7.22□□□□□ -1.25
CLTCL1-208ENST00000615606 GOLGB1Q14789 3259 aaKnown RBP7.22□□□□□ -1.25
CLTCL1-208ENST00000615606 ZNF702PQ9H963 129 aa7.22□□□□□ -1.25
CLTCL1-208ENST00000615606 ANKRD11Q6UB99 2663 aaPredicted RBP7.21□□□□□ -1.25
CLTCL1-208ENST00000615606 NEGR1Q7Z3B1 354 aa7.21□□□□□ -1.25
CLTCL1-208ENST00000615606 CST9LQ9H4G1 147 aa7.21□□□□□ -1.25
CLTCL1-208ENST00000615606 SIGLEC8Q9NYZ4 499 aa7.21□□□□□ -1.25
CLTCL1-208ENST00000615606 K7EMI3 77 aa7.21□□□□□ -1.25
CLTCL1-208ENST00000615606 BBC3Q96PG8 261 aaPredicted RBP7.21□□□□□ -1.25
CLTCL1-208ENST00000615606 TRBV6-1A0A0K0K1D8 114 aa7.21□□□□□ -1.26
CLTCL1-208ENST00000615606 CCL18P55774 89 aa7.21□□□□□ -1.26
CLTCL1-208ENST00000615606 KIR3DS1Q14943 382 aa7.21□□□□□ -1.26
CLTCL1-208ENST00000615606 KLF12Q9Y4X4 402 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms