RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 SMIM15Q7Z3B0 74 aa14.34□□□□□ -0.11
MMP28-204ENST00000615136 DEFB125Q8N687 156 aa14.34□□□□□ -0.11
MMP28-204ENST00000615136 FAM19A4Q96LR4 140 aa14.34□□□□□ -0.11
MMP28-204ENST00000615136 MTORP42345 2549 aa14.34□□□□□ -0.11
MMP28-204ENST00000615136 PRSS47A8MTI9 375 aa14.33□□□□□ -0.12
MMP28-204ENST00000615136 LGALS9O00182 355 aa14.33□□□□□ -0.12
MMP28-204ENST00000615136 GATA1P15976 413 aaPredicted RBP14.33□□□□□ -0.12
MMP28-204ENST00000615136 MPV17L2Q567V2 206 aa14.33□□□□□ -0.12
MMP28-204ENST00000615136 ORAOV1Q8WV07 137 aa14.33□□□□□ -0.12
MMP28-204ENST00000615136 IGLV2-18A0A075B6J9 118 aa14.32□□□□□ -0.12
MMP28-204ENST00000615136 FCER1GP30273 86 aa14.32□□□□□ -0.12
MMP28-204ENST00000615136 ZNF124Q15973 351 aa14.32□□□□□ -0.12
MMP28-204ENST00000615136 TEX29Q8N6K0 151 aa14.32□□□□□ -0.12
MMP28-204ENST00000615136 Q8N8P6 123 aa14.32□□□□□ -0.12
MMP28-204ENST00000615136 TRAV21A0A0B4J279 112 aa14.32□□□□□ -0.12
MMP28-204ENST00000615136 H3BVH4 76 aa14.32□□□□□ -0.12
MMP28-204ENST00000615136 SPANXN1Q5VSR9 72 aa14.32□□□□□ -0.12
MMP28-204ENST00000615136 APRG1Q8IVJ8 170 aa14.32□□□□□ -0.12
MMP28-204ENST00000615136 OR1N2Q8NGR9 330 aa14.32□□□□□ -0.12
MMP28-204ENST00000615136 OR2K2Q8NGT1 345 aa14.32□□□□□ -0.12
MMP28-204ENST00000615136 WFDC12Q8WWY7 111 aa14.32□□□□□ -0.12
MMP28-204ENST00000615136 SMR3AQ99954 134 aa14.32□□□□□ -0.12
MMP28-204ENST00000615136 TRBV7-9A0A0J9YWB2 115 aa14.31□□□□□ -0.12
MMP28-204ENST00000615136 ZNF688P0C7X2 276 aa14.31□□□□□ -0.12
MMP28-204ENST00000615136 ANKRD39Q53RE8 183 aa14.31□□□□□ -0.12
MMP28-204ENST00000615136 NRACQ8N912 160 aa14.31□□□□□ -0.12
MMP28-204ENST00000615136 COX11Q9Y6N1 276 aa14.31□□□□□ -0.12
MMP28-204ENST00000615136 LEPP41159 167 aa14.31□□□□□ -0.12
MMP28-204ENST00000615136 KHDC1LQ5JSQ8 128 aa14.31□□□□□ -0.12
MMP28-204ENST00000615136 BVES-AS1Q5T3Y7 98 aa14.31□□□□□ -0.12
MMP28-204ENST00000615136 C12orf54Q6X4T0 127 aa14.31□□□□□ -0.12
MMP28-204ENST00000615136 NUDT3O95989 172 aa14.3□□□□□ -0.12
MMP28-204ENST00000615136 FGF6P10767 208 aa14.3□□□□□ -0.12
MMP28-204ENST00000615136 C2orf91Q6ZV80 131 aa14.3□□□□□ -0.12
MMP28-204ENST00000615136 OR11H1Q8NG94 326 aa14.3□□□□□ -0.12
MMP28-204ENST00000615136 SPRY2O43597 315 aa14.29□□□□□ -0.12
MMP28-204ENST00000615136 RNASE4P34096 147 aaKnown RBP14.29□□□□□ -0.12
MMP28-204ENST00000615136 PSMG4Q5JS54 123 aa14.29□□□□□ -0.12
MMP28-204ENST00000615136 C11orf44Q8N8P7 122 aa14.29□□□□□ -0.12
MMP28-204ENST00000615136 SORL1Q92673 2214 aa14.28□□□□□ -0.12
MMP28-204ENST00000615136 K7EQG2 157 aa14.28□□□□□ -0.12
MMP28-204ENST00000615136 MED14OSP0DP75 135 aa14.28□□□□□ -0.12
MMP28-204ENST00000615136 ID1P41134 155 aa14.28□□□□□ -0.12
MMP28-204ENST00000615136 MRAP2Q96G30 205 aa14.28□□□□□ -0.12
MMP28-204ENST00000615136 C4orf3Q8WVX3 66 aa14.27□□□□□ -0.12
MMP28-204ENST00000615136 AGRNO00468 2067 aa14.27□□□□□ -0.12
MMP28-204ENST00000615136 TRAV26-2A0A0B4J265 109 aa14.27□□□□□ -0.13
MMP28-204ENST00000615136 LINC01619G3V211 115 aa14.27□□□□□ -0.13
MMP28-204ENST00000615136 KLHL30-AS1Q8NEE0 82 aa14.27□□□□□ -0.13
MMP28-204ENST00000615136 TMEM158Q8WZ71 300 aa14.27□□□□□ -0.13
MMP28-204ENST00000615136 C18orf15Q96N68 181 aa14.27□□□□□ -0.13
MMP28-204ENST00000615136 ASIPP42127 132 aa14.26□□□□□ -0.13
MMP28-204ENST00000615136 SAMD13Q5VXD3 122 aa14.26□□□□□ -0.13
MMP28-204ENST00000615136 Q6ZVH6 145 aa14.26□□□□□ -0.13
MMP28-204ENST00000615136 NOTCH2Q04721 2471 aa14.26□□□□□ -0.13
MMP28-204ENST00000615136 ANXA2RQ3ZCQ2 193 aa14.25□□□□□ -0.13
MMP28-204ENST00000615136 BOD1L2Q8IYS8 172 aa14.25□□□□□ -0.13
MMP28-204ENST00000615136 DLX4Q92988 240 aaPredicted RBP14.25□□□□□ -0.13
MMP28-204ENST00000615136 ZMAT4Q9H898 229 aa14.25□□□□□ -0.13
MMP28-204ENST00000615136 DKK2Q9UBU2 259 aa14.25□□□□□ -0.13
MMP28-204ENST00000615136 SETD2Q9BYW2 2564 aaPredicted RBP14.25□□□□□ -0.13
MMP28-204ENST00000615136 ODF1Q14990 250 aa14.25□□□□□ -0.13
MMP28-204ENST00000615136 OTOGQ6ZRI0 2925 aa14.25□□□□□ -0.13
MMP28-204ENST00000615136 IGKV3-20P01619 116 aa14.24□□□□□ -0.13
MMP28-204ENST00000615136 LAGE3Q14657 143 aa14.24□□□□□ -0.13
MMP28-204ENST00000615136 KLLNB2CW77 178 aa14.23□□□□□ -0.13
MMP28-204ENST00000615136 TAX1BP3O14907 124 aa14.23□□□□□ -0.13
MMP28-204ENST00000615136 GNRH2O43555 120 aa14.23□□□□□ -0.13
MMP28-204ENST00000615136 S100A4P26447 101 aaKnown RBP14.23□□□□□ -0.13
MMP28-204ENST00000615136 A0A0J9YX75 114 aa14.22□□□□□ -0.13
MMP28-204ENST00000615136 A0A1W2PRX2 142 aa14.22□□□□□ -0.13
MMP28-204ENST00000615136 M0R381 172 aa14.22□□□□□ -0.13
MMP28-204ENST00000615136 CD28P10747 220 aa14.22□□□□□ -0.13
MMP28-204ENST00000615136 OR9G4Q8NGQ1 327 aa14.22□□□□□ -0.13
MMP28-204ENST00000615136 DPH3P1Q9H4G8 78 aa14.22□□□□□ -0.13
MMP28-204ENST00000615136 ATP5LO75964 103 aa14.22□□□□□ -0.13
MMP28-204ENST00000615136 SMIM17P0DL12 118 aa14.22□□□□□ -0.13
MMP28-204ENST00000615136 SNRPD3P62318 126 aaKnown RBP14.22□□□□□ -0.13
MMP28-204ENST00000615136 SMIM2Q9BVW6 85 aa14.22□□□□□ -0.13
MMP28-204ENST00000615136 PHLDA3Q9Y5J5 127 aa14.22□□□□□ -0.13
MMP28-204ENST00000615136 NXPH4O95158 308 aa14.21□□□□□ -0.13
MMP28-204ENST00000615136 RNASE3P12724 160 aaKnown RBP14.21□□□□□ -0.13
MMP28-204ENST00000615136 SIVA1O15304 175 aa14.2□□□□□ -0.14
MMP28-204ENST00000615136 RNASE1P07998 156 aaKnown RBP14.2□□□□□ -0.14
MMP28-204ENST00000615136 LINC01006Q8NI28 216 aa14.2□□□□□ -0.14
MMP28-204ENST00000615136 RAX2Q96IS3 184 aa14.2□□□□□ -0.14
MMP28-204ENST00000615136 TRAV12-2A0A075B6T6 113 aa14.2□□□□□ -0.14
MMP28-204ENST00000615136 PRSS1P07477 247 aa14.2□□□□□ -0.14
MMP28-204ENST00000615136 UBE2V1Q13404 147 aa14.2□□□□□ -0.14
MMP28-204ENST00000615136 HHLA3Q9XRX5 114 aa14.2□□□□□ -0.14
MMP28-204ENST00000615136 TRAV12-3A0A0B4J271 114 aa14.19□□□□□ -0.14
MMP28-204ENST00000615136 TMEM61Q8N0U2 210 aa14.19□□□□□ -0.14
MMP28-204ENST00000615136 RASL10AQ92737 203 aa14.19□□□□□ -0.14
MMP28-204ENST00000615136 CCL25O15444 150 aa14.19□□□□□ -0.14
MMP28-204ENST00000615136 TMEM97Q5BJF2 176 aa14.19□□□□□ -0.14
MMP28-204ENST00000615136 AP1S3Q96PC3 154 aa14.19□□□□□ -0.14
MMP28-204ENST00000615136 C20orf78Q9BR46 151 aa14.19□□□□□ -0.14
MMP28-204ENST00000615136 IGKCP01834 107 aa14.18□□□□□ -0.14
MMP28-204ENST00000615136 SUMO2P61956 95 aaKnown RBP14.18□□□□□ -0.14
MMP28-204ENST00000615136 SEC11AP67812 179 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms