RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 CTRLP40313 264 aa11.43□□□□□ -0.58
SNPH-203ENST00000614659 IGKV1OR2-108A0A075B7D4 117 aa11.43□□□□□ -0.58
SNPH-203ENST00000614659 Q8N9W7 124 aa11.43□□□□□ -0.58
SNPH-203ENST00000614659 C4orf3Q8WVX3 66 aa11.43□□□□□ -0.58
SNPH-203ENST00000614659 UBL5Q9BZL1 73 aa11.43□□□□□ -0.58
SNPH-203ENST00000614659 DKK2Q9UBU2 259 aa11.43□□□□□ -0.58
SNPH-203ENST00000614659 BUB3O43684 328 aa11.43□□□□□ -0.58
SNPH-203ENST00000614659 C9orf47Q6ZRZ4 202 aa11.43□□□□□ -0.58
SNPH-203ENST00000614659 ZNF295-AS1Q8N0V1 137 aa11.42□□□□□ -0.58
SNPH-203ENST00000614659 SIRPDQ9H106 197 aa11.42□□□□□ -0.58
SNPH-203ENST00000614659 NDUFA12Q9UI09 145 aa11.42□□□□□ -0.58
SNPH-203ENST00000614659 IGHG4P01861 327 aa11.42□□□□□ -0.58
SNPH-203ENST00000614659 HERVK_113P63121 156 aa11.42□□□□□ -0.58
SNPH-203ENST00000614659 AMTNQ6UX39 209 aa11.42□□□□□ -0.58
SNPH-203ENST00000614659 SCRT2Q9NQ03 307 aa11.42□□□□□ -0.58
SNPH-203ENST00000614659 C19orf71A6NCJ1 209 aa11.42□□□□□ -0.58
SNPH-203ENST00000614659 C5orf56Q8N8D9 126 aa11.42□□□□□ -0.58
SNPH-203ENST00000614659 K7EMT4 169 aa11.41□□□□□ -0.58
SNPH-203ENST00000614659 PLA2G2AP14555 144 aa11.41□□□□□ -0.58
SNPH-203ENST00000614659 MSMPQ1L6U9 139 aa11.41□□□□□ -0.58
SNPH-203ENST00000614659 TMEM243Q9BU79 118 aa11.41□□□□□ -0.58
SNPH-203ENST00000614659 GAGE5Q13069 117 aa11.41□□□□□ -0.58
SNPH-203ENST00000614659 GAGE6Q13070 117 aa11.41□□□□□ -0.58
SNPH-203ENST00000614659 Q6ZVH6 145 aa11.41□□□□□ -0.58
SNPH-203ENST00000614659 ANKRD29Q8N6D5 301 aa11.41□□□□□ -0.58
SNPH-203ENST00000614659 NUPR1O60356 82 aa11.41□□□□□ -0.58
SNPH-203ENST00000614659 C15orf53Q8NAA6 179 aa11.41□□□□□ -0.58
SNPH-203ENST00000614659 GTSF1Q8WW33 167 aa11.41□□□□□ -0.58
SNPH-203ENST00000614659 NCKAP5O14513 1909 aa11.41□□□□□ -0.58
SNPH-203ENST00000614659 ADAMTS9Q9P2N4 1935 aa11.41□□□□□ -0.58
SNPH-203ENST00000614659 TRAV12-1A0A0B4J245 112 aa11.41□□□□□ -0.58
SNPH-203ENST00000614659 J3QQQ9 107 aa11.41□□□□□ -0.58
SNPH-203ENST00000614659 NDUFA11Q86Y39 141 aa11.41□□□□□ -0.58
SNPH-203ENST00000614659 KLK5Q9Y337 293 aaPredicted RBP11.4□□□□□ -0.58
SNPH-203ENST00000614659 BRWD1-AS2P59051 145 aa11.4□□□□□ -0.58
SNPH-203ENST00000614659 SHISA2Q6UWI4 295 aa11.4□□□□□ -0.58
SNPH-203ENST00000614659 KNCNA6PVL3 124 aa11.4□□□□□ -0.59
SNPH-203ENST00000614659 CDK2AP2O75956 126 aa11.4□□□□□ -0.59
SNPH-203ENST00000614659 Q8N7P7 452 aa11.4□□□□□ -0.59
SNPH-203ENST00000614659 NTN5Q8WTR8 489 aaPredicted RBP11.4□□□□□ -0.59
SNPH-203ENST00000614659 TMEM126AQ9H061 195 aa11.4□□□□□ -0.59
SNPH-203ENST00000614659 HIGD1BQ9P298 99 aa11.4□□□□□ -0.59
SNPH-203ENST00000614659 IGKV1D-37A0A075B6S9 117 aa11.39□□□□□ -0.59
SNPH-203ENST00000614659 PRSS29PA6NIE9 313 aa11.39□□□□□ -0.59
SNPH-203ENST00000614659 IGHV4-31P0DP07 118 aa11.39□□□□□ -0.59
SNPH-203ENST00000614659 RBMY1FQ15415 496 aaKnown RBP11.39□□□□□ -0.59
SNPH-203ENST00000614659 IGHG2P01859 326 aa11.38□□□□□ -0.59
SNPH-203ENST00000614659 ASPHD1Q5U4P2 390 aa11.38□□□□□ -0.59
SNPH-203ENST00000614659 CITED2Q99967 270 aaPredicted RBP11.38□□□□□ -0.59
SNPH-203ENST00000614659 SS18L2Q9UHA2 77 aa11.38□□□□□ -0.59
SNPH-203ENST00000614659 DNAJC9-AS1A6NH13 148 aa11.38□□□□□ -0.59
SNPH-203ENST00000614659 ZNF561-AS1K7EIQ3 104 aa11.38□□□□□ -0.59
SNPH-203ENST00000614659 ZNF503Q96F45 646 aa11.38□□□□□ -0.59
SNPH-203ENST00000614659 TRAV12-2A0A075B6T6 113 aa11.38□□□□□ -0.59
SNPH-203ENST00000614659 TRAV13-2A0A0B4J235 113 aa11.38□□□□□ -0.59
SNPH-203ENST00000614659 C19orf84I3L1E1 186 aa11.38□□□□□ -0.59
SNPH-203ENST00000614659 SPART-AS1P0CW21 52 aa11.38□□□□□ -0.59
SNPH-203ENST00000614659 MRAPQ8TCY5 172 aa11.38□□□□□ -0.59
SNPH-203ENST00000614659 USF3Q68DE3 2245 aa11.38□□□□□ -0.59
SNPH-203ENST00000614659 PRSS47A8MTI9 375 aa11.37□□□□□ -0.59
SNPH-203ENST00000614659 A0A1B0GXF2 115 aa11.37□□□□□ -0.59
SNPH-203ENST00000614659 ZFP36P26651 326 aaKnown RBP11.37□□□□□ -0.59
SNPH-203ENST00000614659 C16orf74Q96GX8 76 aa11.37□□□□□ -0.59
SNPH-203ENST00000614659 SMAD5-AS1Q9Y6J3 95 aa11.37□□□□□ -0.59
SNPH-203ENST00000614659 A6NDX4 124 aa11.37□□□□□ -0.59
SNPH-203ENST00000614659 ODF3BA8MYP8 253 aa11.37□□□□□ -0.59
SNPH-203ENST00000614659 CFC1BP0CG36 223 aa11.37□□□□□ -0.59
SNPH-203ENST00000614659 CFC1P0CG37 223 aa11.37□□□□□ -0.59
SNPH-203ENST00000614659 B5MCH6 92 aa11.37□□□□□ -0.59
SNPH-203ENST00000614659 PCP2Q8IVA1 136 aa11.37□□□□□ -0.59
SNPH-203ENST00000614659 YPEL4Q96NS1 127 aa11.36□□□□□ -0.59
SNPH-203ENST00000614659 TTC28Q96AY4 2481 aa11.36□□□□□ -0.59
SNPH-203ENST00000614659 IGLL5B9A064 214 aa11.36□□□□□ -0.59
SNPH-203ENST00000614659 PROP1O75360 226 aa11.36□□□□□ -0.59
SNPH-203ENST00000614659 ZNRF2Q8NHG8 242 aa11.36□□□□□ -0.59
SNPH-203ENST00000614659 GNRH2O43555 120 aa11.36□□□□□ -0.59
SNPH-203ENST00000614659 GPHB5Q86YW7 130 aa11.36□□□□□ -0.59
SNPH-203ENST00000614659 E7EUB6 86 aa11.35□□□□□ -0.59
SNPH-203ENST00000614659 MRPL36Q9P0J6 103 aaKnown RBP11.35□□□□□ -0.59
SNPH-203ENST00000614659 AKAP6Q13023 2319 aa11.35□□□□□ -0.59
SNPH-203ENST00000614659 ACYP1P07311 99 aa11.35□□□□□ -0.59
SNPH-203ENST00000614659 SLURP1P55000 103 aa11.35□□□□□ -0.59
SNPH-203ENST00000614659 PIFOQ8TCI5 191 aa11.35□□□□□ -0.59
SNPH-203ENST00000614659 PTPRSQ13332 1948 aa11.35□□□□□ -0.59
SNPH-203ENST00000614659 LMO4P61968 165 aa11.35□□□□□ -0.59
SNPH-203ENST00000614659 HAMPP81172 84 aa11.35□□□□□ -0.59
SNPH-203ENST00000614659 RNASE8Q8TDE3 154 aaKnown RBP11.35□□□□□ -0.59
SNPH-203ENST00000614659 BLCAPP62952 87 aa11.35□□□□□ -0.59
SNPH-203ENST00000614659 IGLV2-8P01709 118 aa11.34□□□□□ -0.59
SNPH-203ENST00000614659 PFN2P35080 140 aa11.34□□□□□ -0.59
SNPH-203ENST00000614659 SPATA12Q7Z6I5 190 aa11.34□□□□□ -0.59
SNPH-203ENST00000614659 RPL32P62910 135 aaKnown RBP11.34□□□□□ -0.59
SNPH-203ENST00000614659 SPTBN1Q01082 2364 aaKnown RBP11.34□□□□□ -0.59
SNPH-203ENST00000614659 CCL18P55774 89 aa11.34□□□□□ -0.59
SNPH-203ENST00000614659 SUMO4Q6EEV6 95 aa11.34□□□□□ -0.59
SNPH-203ENST00000614659 Q6YL49 198 aa11.34□□□□□ -0.59
SNPH-203ENST00000614659 AJUBAQ96IF1 538 aa11.34□□□□□ -0.59
SNPH-203ENST00000614659 CRLF1O75462 422 aa11.33□□□□□ -0.6
SNPH-203ENST00000614659 CRYBA4P53673 196 aa11.33□□□□□ -0.6
SNPH-203ENST00000614659 TOMM6Q96B49 74 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms