RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 UBE2E1P51965 193 aa11.44□□□□□ -0.58
PCDHGB1-202ENST00000611598 EMP1P54849 157 aa11.44□□□□□ -0.58
PCDHGB1-202ENST00000611598 CENPVL3A0A0U1RRI6 287 aa11.44□□□□□ -0.58
PCDHGB1-202ENST00000611598 F6UB75 175 aa11.44□□□□□ -0.58
PCDHGB1-202ENST00000611598 NDUFS8O00217 210 aa11.44□□□□□ -0.58
PCDHGB1-202ENST00000611598 GNRH2O43555 120 aa11.44□□□□□ -0.58
PCDHGB1-202ENST00000611598 DUSP14O95147 198 aaKnown RBP11.44□□□□□ -0.58
PCDHGB1-202ENST00000611598 ADORA2A-AS1P86434 159 aa11.44□□□□□ -0.58
PCDHGB1-202ENST00000611598 SCGB1D4Q6XE38 83 aa11.44□□□□□ -0.58
PCDHGB1-202ENST00000611598 C9orf139Q6ZV77 190 aa11.44□□□□□ -0.58
PCDHGB1-202ENST00000611598 ATRXP46100 2492 aa11.44□□□□□ -0.58
PCDHGB1-202ENST00000611598 COX6B1P14854 86 aa11.43□□□□□ -0.58
PCDHGB1-202ENST00000611598 ASIPP42127 132 aa11.43□□□□□ -0.58
PCDHGB1-202ENST00000611598 TRAV21A0A0B4J279 112 aa11.43□□□□□ -0.58
PCDHGB1-202ENST00000611598 APOMO95445 188 aa11.43□□□□□ -0.58
PCDHGB1-202ENST00000611598 CRYGDP07320 174 aa11.43□□□□□ -0.58
PCDHGB1-202ENST00000611598 C5orf56Q8N8D9 126 aa11.43□□□□□ -0.58
PCDHGB1-202ENST00000611598 VPS13CQ709C8 3753 aa11.42□□□□□ -0.58
PCDHGB1-202ENST00000611598 RNASE4P34096 147 aaKnown RBP11.42□□□□□ -0.58
PCDHGB1-202ENST00000611598 ZFP2Q6ZN57 461 aa11.42□□□□□ -0.58
PCDHGB1-202ENST00000611598 IGKV3-7A0A075B6H7 116 aa11.42□□□□□ -0.58
PCDHGB1-202ENST00000611598 K7ENP7 123 aa11.42□□□□□ -0.58
PCDHGB1-202ENST00000611598 SRSF9Q13242 221 aaKnown RBP eCLIP11.42□□□□□ -0.58
PCDHGB1-202ENST00000611598 CFAP126Q5VTH2 177 aa11.42□□□□□ -0.58
PCDHGB1-202ENST00000611598 LENEPQ9Y5L5 61 aa11.42□□□□□ -0.58
PCDHGB1-202ENST00000611598 TSPAN13O95857 204 aa11.41□□□□□ -0.58
PCDHGB1-202ENST00000611598 TSHBP01222 138 aa11.41□□□□□ -0.58
PCDHGB1-202ENST00000611598 RNASE3P12724 160 aaKnown RBP11.41□□□□□ -0.58
PCDHGB1-202ENST00000611598 UBE2D1P51668 147 aa11.41□□□□□ -0.58
PCDHGB1-202ENST00000611598 OR10J6PQ8NGY7 276 aa11.41□□□□□ -0.58
PCDHGB1-202ENST00000611598 LINC00477Q96M19 166 aa11.41□□□□□ -0.58
PCDHGB1-202ENST00000611598 LOC107984156A0A0G2JMH3 177 aa11.41□□□□□ -0.58
PCDHGB1-202ENST00000611598 C11orf86A6NJI1 115 aa11.41□□□□□ -0.58
PCDHGB1-202ENST00000611598 NFE4Q86UQ8 179 aa11.41□□□□□ -0.58
PCDHGB1-202ENST00000611598 ARL17AQ8IVW1 177 aa11.41□□□□□ -0.58
PCDHGB1-202ENST00000611598 MUC4Q99102 2169 aa11.41□□□□□ -0.58
PCDHGB1-202ENST00000611598 IGHV3OR16-10A0A075B7F0 116 aa11.4□□□□□ -0.58
PCDHGB1-202ENST00000611598 SOCS3O14543 225 aa11.4□□□□□ -0.58
PCDHGB1-202ENST00000611598 ARL3P36405 182 aa11.4□□□□□ -0.58
PCDHGB1-202ENST00000611598 IGLV4-69A0A075B6H9 119 aa11.4□□□□□ -0.58
PCDHGB1-202ENST00000611598 PSMB2P49721 201 aa11.4□□□□□ -0.58
PCDHGB1-202ENST00000611598 FOXI1Q12951 378 aa11.4□□□□□ -0.58
PCDHGB1-202ENST00000611598 DLX4Q92988 240 aaPredicted RBP11.4□□□□□ -0.58
PCDHGB1-202ENST00000611598 PTH2Q96A98 100 aa11.4□□□□□ -0.58
PCDHGB1-202ENST00000611598 ATP6V0BQ99437 205 aa11.4□□□□□ -0.58
PCDHGB1-202ENST00000611598 C1QTNF4Q9BXJ3 329 aa11.4□□□□□ -0.58
PCDHGB1-202ENST00000611598 TRAV41A0A0B4J266 112 aa11.39□□□□□ -0.59
PCDHGB1-202ENST00000611598 FOXC1Q12948 553 aa11.39□□□□□ -0.59
PCDHGB1-202ENST00000611598 JPT2Q9H910 190 aa11.39□□□□□ -0.59
PCDHGB1-202ENST00000611598 NPFFO15130 113 aa11.39□□□□□ -0.59
PCDHGB1-202ENST00000611598 CD7P09564 240 aa11.39□□□□□ -0.59
PCDHGB1-202ENST00000611598 RPL39P62891 51 aaKnown RBP11.39□□□□□ -0.59
PCDHGB1-202ENST00000611598 RPL11P62913 178 aaKnown RBP11.39□□□□□ -0.59
PCDHGB1-202ENST00000611598 FHL3Q13643 280 aa11.39□□□□□ -0.59
PCDHGB1-202ENST00000611598 ZNF418Q8TF45 676 aaPredicted RBP11.39□□□□□ -0.59
PCDHGB1-202ENST00000611598 TP53TG1Q9Y2A0 90 aa11.39□□□□□ -0.59
PCDHGB1-202ENST00000611598 TMEM238LA0A1B0GVL6 79 aa11.38□□□□□ -0.59
PCDHGB1-202ENST00000611598 A6NJY4 79 aa11.38□□□□□ -0.59
PCDHGB1-202ENST00000611598 SYT8Q8NBV8 401 aa11.38□□□□□ -0.59
PCDHGB1-202ENST00000611598 COL12A1Q99715 3063 aa11.38□□□□□ -0.59
PCDHGB1-202ENST00000611598 COL6A6A6NMZ7 2263 aa11.38□□□□□ -0.59
PCDHGB1-202ENST00000611598 TSPEAR-AS2P59090 65 aa11.38□□□□□ -0.59
PCDHGB1-202ENST00000611598 Q6ZS46 218 aa11.38□□□□□ -0.59
PCDHGB1-202ENST00000611598 OVOL1O14753 267 aa11.37□□□□□ -0.59
PCDHGB1-202ENST00000611598 LINC00315P59091 139 aa11.37□□□□□ -0.59
PCDHGB1-202ENST00000611598 C19orf54Q5BKX5 351 aa11.37□□□□□ -0.59
PCDHGB1-202ENST00000611598 CDIP1Q9H305 208 aa11.37□□□□□ -0.59
PCDHGB1-202ENST00000611598 A0A0J9YY99 117 aa11.37□□□□□ -0.59
PCDHGB1-202ENST00000611598 A0A1B0GV72 72 aa11.37□□□□□ -0.59
PCDHGB1-202ENST00000611598 IGHV3-11P01762 117 aa11.37□□□□□ -0.59
PCDHGB1-202ENST00000611598 FAM19A4Q96LR4 140 aa11.37□□□□□ -0.59
PCDHGB1-202ENST00000611598 UBE2D3P61077 147 aa11.36□□□□□ -0.59
PCDHGB1-202ENST00000611598 UBE2D2P62837 147 aa11.36□□□□□ -0.59
PCDHGB1-202ENST00000611598 WFDC12Q8WWY7 111 aa11.36□□□□□ -0.59
PCDHGB1-202ENST00000611598 BPESC1Q9GZL8 116 aa11.36□□□□□ -0.59
PCDHGB1-202ENST00000611598 KIF25-AS1Q9Y6Z4 181 aa11.36□□□□□ -0.59
PCDHGB1-202ENST00000611598 IGIPA6NJ69 53 aa11.36□□□□□ -0.59
PCDHGB1-202ENST00000611598 FAM223BA6NKX1 122 aa11.36□□□□□ -0.59
PCDHGB1-202ENST00000611598 TGFAP01135 160 aa11.36□□□□□ -0.59
PCDHGB1-202ENST00000611598 LMO4P61968 165 aa11.36□□□□□ -0.59
PCDHGB1-202ENST00000611598 FAM223AQ8IWN6 122 aa11.36□□□□□ -0.59
PCDHGB1-202ENST00000611598 IGF2RP11717 2491 aa11.36□□□□□ -0.59
PCDHGB1-202ENST00000611598 A0A087WWL8 130 aa11.35□□□□□ -0.59
PCDHGB1-202ENST00000611598 SRD5A1P18405 259 aa11.35□□□□□ -0.59
PCDHGB1-202ENST00000611598 NDUFA11Q86Y39 141 aa11.35□□□□□ -0.59
PCDHGB1-202ENST00000611598 SPTAN1Q13813 2472 aaKnown RBP11.35□□□□□ -0.59
PCDHGB1-202ENST00000611598 MED14OSP0DP75 135 aa11.34□□□□□ -0.59
PCDHGB1-202ENST00000611598 CKS1BP61024 79 aa11.34□□□□□ -0.59
PCDHGB1-202ENST00000611598 MOB4Q9Y3A3 225 aa11.34□□□□□ -0.59
PCDHGB1-202ENST00000611598 TCL1BO95988 128 aa11.34□□□□□ -0.59
PCDHGB1-202ENST00000611598 SUMO4Q6EEV6 95 aa11.34□□□□□ -0.59
PCDHGB1-202ENST00000611598 UBTD1Q9HAC8 227 aa11.34□□□□□ -0.59
PCDHGB1-202ENST00000611598 NDUFA4O00483 81 aa11.33□□□□□ -0.6
PCDHGB1-202ENST00000611598 CFC1BP0CG36 223 aa11.33□□□□□ -0.6
PCDHGB1-202ENST00000611598 CFC1P0CG37 223 aa11.33□□□□□ -0.6
PCDHGB1-202ENST00000611598 EDN2P20800 178 aa11.33□□□□□ -0.6
PCDHGB1-202ENST00000611598 PMVKQ15126 192 aa11.33□□□□□ -0.6
PCDHGB1-202ENST00000611598 TMEM170BQ5T4T1 132 aa11.33□□□□□ -0.6
PCDHGB1-202ENST00000611598 BRD3OSQ6XYD6 125 aa11.33□□□□□ -0.6
PCDHGB1-202ENST00000611598 APRG1Q8IVJ8 170 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms