RNA–Protein interactions for RNA: ENST00000607482.5

CTSA-217, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 403 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-217ENST00000607482 AKR1C3P42330 323 aa13.15□□□□□ -0.3
CTSA-217ENST00000607482 RHOHQ15669 191 aa13.15□□□□□ -0.3
CTSA-217ENST00000607482 ZNF506Q5JVG8 444 aa13.15□□□□□ -0.3
CTSA-217ENST00000607482 FAM162BQ5T6X4 162 aa13.15□□□□□ -0.3
CTSA-217ENST00000607482 NFE4Q86UQ8 179 aa13.15□□□□□ -0.3
CTSA-217ENST00000607482 C9orf85Q96MD7 179 aa13.15□□□□□ -0.3
CTSA-217ENST00000607482 LOC100131303A0A0U1RQF7 123 aa13.14□□□□□ -0.31
CTSA-217ENST00000607482 PGPEP1LA6NFU8 196 aa13.14□□□□□ -0.31
CTSA-217ENST00000607482 M0R036 132 aa13.14□□□□□ -0.31
CTSA-217ENST00000607482 RS1O15537 224 aa13.14□□□□□ -0.31
CTSA-217ENST00000607482 PAGE4O60829 102 aa13.14□□□□□ -0.31
CTSA-217ENST00000607482 SPATA12Q7Z6I5 190 aa13.14□□□□□ -0.31
CTSA-217ENST00000607482 SLC25A29Q8N8R3 303 aa13.14□□□□□ -0.31
CTSA-217ENST00000607482 SYT8Q8NBV8 401 aa13.14□□□□□ -0.31
CTSA-217ENST00000607482 PKD1P98161 4303 aa13.13□□□□□ -0.31
CTSA-217ENST00000607482 TRAV8-6A0A0B4J262 113 aa13.13□□□□□ -0.31
CTSA-217ENST00000607482 A8MWV9 139 aa13.13□□□□□ -0.31
CTSA-217ENST00000607482 MGST1P10620 155 aaKnown RBP13.13□□□□□ -0.31
CTSA-217ENST00000607482 DPPA3Q6W0C5 159 aa13.13□□□□□ -0.31
CTSA-217ENST00000607482 IGKV3D-20A0A0C4DH25 116 aa13.12□□□□□ -0.31
CTSA-217ENST00000607482 TRBV6-4A0A1B0GX49 114 aa13.12□□□□□ -0.31
CTSA-217ENST00000607482 K7EP13 123 aa13.12□□□□□ -0.31
CTSA-217ENST00000607482 H2AFB1P0C5Y9 115 aa13.12□□□□□ -0.31
CTSA-217ENST00000607482 RNASE3P12724 160 aaKnown RBP13.12□□□□□ -0.31
CTSA-217ENST00000607482 TPT1P13693 172 aaKnown RBP13.12□□□□□ -0.31
CTSA-217ENST00000607482 OR10J3Q5JRS4 329 aa13.12□□□□□ -0.31
CTSA-217ENST00000607482 WFDC10BQ8IUB3 73 aa13.12□□□□□ -0.31
CTSA-217ENST00000607482 OR11H4Q8NGC9 324 aa13.12□□□□□ -0.31
CTSA-217ENST00000607482 PTH2Q96A98 100 aa13.12□□□□□ -0.31
CTSA-217ENST00000607482 ZC2HC1AQ96GY0 325 aa13.12□□□□□ -0.31
CTSA-217ENST00000607482 H3BVH4 76 aa13.11□□□□□ -0.31
CTSA-217ENST00000607482 SH2D1AO60880 128 aa13.11□□□□□ -0.31
CTSA-217ENST00000607482 TMUB2Q71RG4 321 aa13.11□□□□□ -0.31
CTSA-217ENST00000607482 C10orf126Q8N4M7 172 aa13.11□□□□□ -0.31
CTSA-217ENST00000607482 PHLDA3Q9Y5J5 127 aa13.11□□□□□ -0.31
CTSA-217ENST00000607482 TMSB15BA0A087X1C1 80 aa13.1□□□□□ -0.31
CTSA-217ENST00000607482 GRIFINA4D1Z8 144 aa13.1□□□□□ -0.31
CTSA-217ENST00000607482 S100A9P06702 114 aaKnown RBP13.1□□□□□ -0.31
CTSA-217ENST00000607482 CRYGDP07320 174 aa13.1□□□□□ -0.31
CTSA-217ENST00000607482 ERVFC1-1P60608 527 aa13.1□□□□□ -0.31
CTSA-217ENST00000607482 EIF5AL1Q6IS14 154 aaKnown RBP13.1□□□□□ -0.31
CTSA-217ENST00000607482 MBD3L1Q8WWY6 194 aa13.1□□□□□ -0.31
CTSA-217ENST00000607482 IL36BQ9NZH7 164 aa13.1□□□□□ -0.31
CTSA-217ENST00000607482 MSRB1Q9NZV6 116 aa13.1□□□□□ -0.31
CTSA-217ENST00000607482 BOLA1Q9Y3E2 137 aa13.1□□□□□ -0.31
CTSA-217ENST00000607482 KRBOX1C9JBD0 128 aa13.09□□□□□ -0.31
CTSA-217ENST00000607482 TEX46H3BTG2 121 aa13.09□□□□□ -0.31
CTSA-217ENST00000607482 IGHV3-38A0A0C4DH36 116 aa13.08□□□□□ -0.32
CTSA-217ENST00000607482 LTAP01374 205 aa13.08□□□□□ -0.32
CTSA-217ENST00000607482 ARMS2P0C7Q2 107 aa13.08□□□□□ -0.32
CTSA-217ENST00000607482 DNAH10OSP0CZ25 163 aa13.08□□□□□ -0.32
CTSA-217ENST00000607482 ZFP2Q6ZN57 461 aa13.08□□□□□ -0.32
CTSA-217ENST00000607482 ATP6V0E2Q8NHE4 81 aa13.08□□□□□ -0.32
CTSA-217ENST00000607482 KIAA1109Q2LD37 5005 aa13.08□□□□□ -0.32
CTSA-217ENST00000607482 TRBV6-1A0A0K0K1D8 114 aa13.07□□□□□ -0.32
CTSA-217ENST00000607482 CRIP1P50238 77 aa13.07□□□□□ -0.32
CTSA-217ENST00000607482 TIRAPP58753 221 aa13.07□□□□□ -0.32
CTSA-217ENST00000607482 PIK3CD-AS1Q5SR53 167 aa13.07□□□□□ -0.32
CTSA-217ENST00000607482 FAM74A4Q5TZK3 123 aa13.07□□□□□ -0.32
CTSA-217ENST00000607482 PARLQ9H300 379 aa13.07□□□□□ -0.32
CTSA-217ENST00000607482 TNFRSF18Q9Y5U5 241 aa13.07□□□□□ -0.32
CTSA-217ENST00000607482 HERC2O95714 4834 aa13.07□□□□□ -0.32
CTSA-217ENST00000607482 M0R381 172 aa13.06□□□□□ -0.32
CTSA-217ENST00000607482 RHODO00212 210 aa13.06□□□□□ -0.32
CTSA-217ENST00000607482 PSCAO43653 123 aa13.06□□□□□ -0.32
CTSA-217ENST00000607482 BAGE2Q86Y30 109 aa13.06□□□□□ -0.32
CTSA-217ENST00000607482 SCO2A0A1W2PP80 73 aa13.05□□□□□ -0.32
CTSA-217ENST00000607482 GAGE12JA6NER3 117 aa13.05□□□□□ -0.32
CTSA-217ENST00000607482 GAGE1Q13065 139 aa13.05□□□□□ -0.32
CTSA-217ENST00000607482 GAGE4Q13068 117 aa13.05□□□□□ -0.32
CTSA-217ENST00000607482 GAGE5Q13069 117 aa13.05□□□□□ -0.32
CTSA-217ENST00000607482 ZNF674Q2M3X9 581 aa13.05□□□□□ -0.32
CTSA-217ENST00000607482 GAGE13Q4V321 117 aa13.05□□□□□ -0.32
CTSA-217ENST00000607482 DMRTA1Q5VZB9 504 aa13.05□□□□□ -0.32
CTSA-217ENST00000607482 COX8CQ7Z4L0 72 aa13.05□□□□□ -0.32
CTSA-217ENST00000607482 GTSF1LQ9H1H1 148 aa13.05□□□□□ -0.32
CTSA-217ENST00000607482 GNG13Q9P2W3 67 aa13.05□□□□□ -0.32
CTSA-217ENST00000607482 DNAH11Q96DT5 4516 aa13.04□□□□□ -0.32
CTSA-217ENST00000607482 RAB5CP51148 216 aa13.04□□□□□ -0.32
CTSA-217ENST00000607482 ZFP82Q8N141 532 aa13.04□□□□□ -0.32
CTSA-217ENST00000607482 MANBALQ9NQG1 85 aa13.04□□□□□ -0.32
CTSA-217ENST00000607482 LINC01559Q495D7 138 aa13.03□□□□□ -0.32
CTSA-217ENST00000607482 LELP1Q5T871 98 aa13.03□□□□□ -0.32
CTSA-217ENST00000607482 PRR27Q6MZM9 219 aa13.03□□□□□ -0.32
CTSA-217ENST00000607482 JPT2Q9H910 190 aa13.03□□□□□ -0.32
CTSA-217ENST00000607482 PGPEP1Q9NXJ5 209 aa13.03□□□□□ -0.32
CTSA-217ENST00000607482 A0A087WWL8 130 aa13.02□□□□□ -0.33
CTSA-217ENST00000607482 IGHV3-30P01768 117 aa13.02□□□□□ -0.33
CTSA-217ENST00000607482 IGHV3-33P01772 117 aa13.02□□□□□ -0.33
CTSA-217ENST00000607482 IGHV3-30-3P0DP02 117 aa13.02□□□□□ -0.33
CTSA-217ENST00000607482 IGHV3-30-5P0DP03 117 aa13.02□□□□□ -0.33
CTSA-217ENST00000607482 KRTAP10-2P60368 255 aa13.02□□□□□ -0.33
CTSA-217ENST00000607482 DNLZQ5SXM8 178 aa13.02□□□□□ -0.33
CTSA-217ENST00000607482 Q6ZRN7 208 aaPredicted RBP13.02□□□□□ -0.33
CTSA-217ENST00000607482 Q6ZSN1 163 aa13.02□□□□□ -0.33
CTSA-217ENST00000607482 SAMD10Q9BYL1 202 aa13.02□□□□□ -0.33
CTSA-217ENST00000607482 DYNC1H1Q14204 4646 aaKnown RBP13.01□□□□□ -0.33
CTSA-217ENST00000607482 CDK2AP2O75956 126 aa13.01□□□□□ -0.33
CTSA-217ENST00000607482 LINC01556Q5JQF7 62 aa13.01□□□□□ -0.33
CTSA-217ENST00000607482 Q9HAA7 133 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms