RNA–Protein interactions for RNA: ENST00000607049.5

PKNOX1-210, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-210ENST00000607049 FAM162BQ5T6X4 162 aa9.9□□□□□ -0.82
PKNOX1-210ENST00000607049 NFE4Q86UQ8 179 aa9.9□□□□□ -0.82
PKNOX1-210ENST00000607049 SYT8Q8NBV8 401 aa9.9□□□□□ -0.82
PKNOX1-210ENST00000607049 C9orf85Q96MD7 179 aa9.9□□□□□ -0.82
PKNOX1-210ENST00000607049 C11orf21Q9P2W6 132 aa9.9□□□□□ -0.82
PKNOX1-210ENST00000607049 LY96Q9Y6Y9 160 aa9.9□□□□□ -0.82
PKNOX1-210ENST00000607049 TRBV6-4A0A1B0GX49 114 aa9.89□□□□□ -0.83
PKNOX1-210ENST00000607049 A8MWV9 139 aa9.89□□□□□ -0.83
PKNOX1-210ENST00000607049 TEX46H3BTG2 121 aa9.89□□□□□ -0.83
PKNOX1-210ENST00000607049 RS1O15537 224 aa9.89□□□□□ -0.83
PKNOX1-210ENST00000607049 H2AFB1P0C5Y9 115 aa9.89□□□□□ -0.83
PKNOX1-210ENST00000607049 MGST1P10620 155 aaKnown RBP9.89□□□□□ -0.83
PKNOX1-210ENST00000607049 GATA1P15976 413 aaPredicted RBP9.89□□□□□ -0.83
PKNOX1-210ENST00000607049 LGALSLQ3ZCW2 172 aaPredicted RBP9.89□□□□□ -0.83
PKNOX1-210ENST00000607049 PIK3CD-AS1Q5SR53 167 aa9.89□□□□□ -0.83
PKNOX1-210ENST00000607049 CFAP126Q5VTH2 177 aa9.89□□□□□ -0.83
PKNOX1-210ENST00000607049 MBD3L1Q8WWY6 194 aa9.89□□□□□ -0.83
PKNOX1-210ENST00000607049 TRBV6-1A0A0K0K1D8 114 aa9.88□□□□□ -0.83
PKNOX1-210ENST00000607049 EREGO14944 169 aa9.88□□□□□ -0.83
PKNOX1-210ENST00000607049 PAGE4O60829 102 aa9.88□□□□□ -0.83
PKNOX1-210ENST00000607049 ZNF506Q5JVG8 444 aa9.88□□□□□ -0.83
PKNOX1-210ENST00000607049 TMUB2Q71RG4 321 aa9.88□□□□□ -0.83
PKNOX1-210ENST00000607049 OR11H4Q8NGC9 324 aa9.88□□□□□ -0.83
PKNOX1-210ENST00000607049 IL36BQ9NZH7 164 aa9.88□□□□□ -0.83
PKNOX1-210ENST00000607049 TRAV8-6A0A0B4J262 113 aa9.87□□□□□ -0.83
PKNOX1-210ENST00000607049 IGKV3D-20A0A0C4DH25 116 aa9.87□□□□□ -0.83
PKNOX1-210ENST00000607049 A0A1B0GV50 99 aa9.87□□□□□ -0.83
PKNOX1-210ENST00000607049 C16orf90A8MZG2 172 aa9.87□□□□□ -0.83
PKNOX1-210ENST00000607049 RNASE3P12724 160 aaKnown RBP9.87□□□□□ -0.83
PKNOX1-210ENST00000607049 RAB5CP51148 216 aa9.87□□□□□ -0.83
PKNOX1-210ENST00000607049 LINC00315P59091 139 aa9.87□□□□□ -0.83
PKNOX1-210ENST00000607049 C10orf126Q8N4M7 172 aa9.87□□□□□ -0.83
PKNOX1-210ENST00000607049 SLC25A29Q8N8R3 303 aa9.87□□□□□ -0.83
PKNOX1-210ENST00000607049 KRTAP1-5Q9BYS1 174 aa9.87□□□□□ -0.83
PKNOX1-210ENST00000607049 IGHV3-73A0A0B4J1V6 119 aa9.86□□□□□ -0.83
PKNOX1-210ENST00000607049 PGPEP1LA6NFU8 196 aa9.86□□□□□ -0.83
PKNOX1-210ENST00000607049 M0R036 132 aa9.86□□□□□ -0.83
PKNOX1-210ENST00000607049 SH2D1AO60880 128 aa9.86□□□□□ -0.83
PKNOX1-210ENST00000607049 LTAP01374 205 aa9.86□□□□□ -0.83
PKNOX1-210ENST00000607049 TIRAPP58753 221 aa9.86□□□□□ -0.83
PKNOX1-210ENST00000607049 ZFP2Q6ZN57 461 aa9.86□□□□□ -0.83
PKNOX1-210ENST00000607049 COX8CQ7Z4L0 72 aa9.86□□□□□ -0.83
PKNOX1-210ENST00000607049 ZC2HC1AQ96GY0 325 aa9.86□□□□□ -0.83
PKNOX1-210ENST00000607049 PHLDA3Q9Y5J5 127 aa9.86□□□□□ -0.83
PKNOX1-210ENST00000607049 RHODO00212 210 aa9.85□□□□□ -0.83
PKNOX1-210ENST00000607049 KRBOX1C9JBD0 128 aa9.84□□□□□ -0.83
PKNOX1-210ENST00000607049 H3BVH4 76 aa9.84□□□□□ -0.83
PKNOX1-210ENST00000607049 OR10J3Q5JRS4 329 aa9.84□□□□□ -0.83
PKNOX1-210ENST00000607049 ZNF575Q86XF7 245 aa9.84□□□□□ -0.83
PKNOX1-210ENST00000607049 MANBALQ9NQG1 85 aa9.84□□□□□ -0.83
PKNOX1-210ENST00000607049 DNAH11Q96DT5 4516 aa9.83□□□□□ -0.84
PKNOX1-210ENST00000607049 IGHV3-38A0A0C4DH36 116 aa9.83□□□□□ -0.84
PKNOX1-210ENST00000607049 LOC100131303A0A0U1RQF7 123 aa9.83□□□□□ -0.84
PKNOX1-210ENST00000607049 CRYGDP07320 174 aa9.83□□□□□ -0.84
PKNOX1-210ENST00000607049 ARMS2P0C7Q2 107 aa9.83□□□□□ -0.84
PKNOX1-210ENST00000607049 DNAH10OSP0CZ25 163 aa9.83□□□□□ -0.84
PKNOX1-210ENST00000607049 ERVFC1-1P60608 527 aa9.83□□□□□ -0.84
PKNOX1-210ENST00000607049 ZNF674Q2M3X9 581 aa9.83□□□□□ -0.84
PKNOX1-210ENST00000607049 LINC01559Q495D7 138 aa9.83□□□□□ -0.84
PKNOX1-210ENST00000607049 DNLZQ5SXM8 178 aa9.83□□□□□ -0.84
PKNOX1-210ENST00000607049 SPATA12Q7Z6I5 190 aa9.83□□□□□ -0.84
PKNOX1-210ENST00000607049 BAGE2Q86Y30 109 aa9.83□□□□□ -0.84
PKNOX1-210ENST00000607049 WFDC10BQ8IUB3 73 aa9.83□□□□□ -0.84
PKNOX1-210ENST00000607049 ATP6V0E2Q8NHE4 81 aa9.83□□□□□ -0.84
PKNOX1-210ENST00000607049 PARLQ9H300 379 aa9.83□□□□□ -0.84
PKNOX1-210ENST00000607049 MSRB1Q9NZV6 116 aa9.83□□□□□ -0.84
PKNOX1-210ENST00000607049 HERC2O95714 4834 aa9.82□□□□□ -0.84
PKNOX1-210ENST00000607049 TMSB15BA0A087X1C1 80 aa9.82□□□□□ -0.84
PKNOX1-210ENST00000607049 GRIFINA4D1Z8 144 aa9.82□□□□□ -0.84
PKNOX1-210ENST00000607049 CRIP1P50238 77 aa9.82□□□□□ -0.84
PKNOX1-210ENST00000607049 TCTE3Q8IZS6 198 aa9.82□□□□□ -0.84
PKNOX1-210ENST00000607049 ZFP82Q8N141 532 aa9.82□□□□□ -0.84
PKNOX1-210ENST00000607049 GNG13Q9P2W3 67 aa9.82□□□□□ -0.84
PKNOX1-210ENST00000607049 KIAA1109Q2LD37 5005 aa9.82□□□□□ -0.84
PKNOX1-210ENST00000607049 PKHD1P08F94 4074 aa9.81□□□□□ -0.84
PKNOX1-210ENST00000607049 SCO2A0A1W2PP80 73 aa9.81□□□□□ -0.84
PKNOX1-210ENST00000607049 M0R381 172 aa9.81□□□□□ -0.84
PKNOX1-210ENST00000607049 IFNA1P01562 189 aa9.81□□□□□ -0.84
PKNOX1-210ENST00000607049 LELP1Q5T871 98 aa9.81□□□□□ -0.84
PKNOX1-210ENST00000607049 GTSF1LQ9H1H1 148 aa9.81□□□□□ -0.84
PKNOX1-210ENST00000607049 TRAV1-1A0A0B4J248 108 aa9.8□□□□□ -0.84
PKNOX1-210ENST00000607049 FAM74A4Q5TZK3 123 aa9.8□□□□□ -0.84
PKNOX1-210ENST00000607049 SLC51BQ86UW2 128 aa9.8□□□□□ -0.84
PKNOX1-210ENST00000607049 PKD1P98161 4303 aa9.8□□□□□ -0.84
PKNOX1-210ENST00000607049 A0A087WWC5 75 aa9.79□□□□□ -0.84
PKNOX1-210ENST00000607049 PSCAO43653 123 aa9.79□□□□□ -0.84
PKNOX1-210ENST00000607049 LINC01556Q5JQF7 62 aa9.79□□□□□ -0.84
PKNOX1-210ENST00000607049 PGPEP1Q9NXJ5 209 aa9.79□□□□□ -0.84
PKNOX1-210ENST00000607049 DYNC1H1Q14204 4646 aaKnown RBP9.79□□□□□ -0.84
PKNOX1-210ENST00000607049 GAGE12JA6NER3 117 aa9.78□□□□□ -0.84
PKNOX1-210ENST00000607049 C1QBP02746 253 aa9.78□□□□□ -0.84
PKNOX1-210ENST00000607049 CXCL1P09341 107 aa9.78□□□□□ -0.84
PKNOX1-210ENST00000607049 RPL35P42766 123 aaKnown RBP9.78□□□□□ -0.84
PKNOX1-210ENST00000607049 GAGE1Q13065 139 aa9.78□□□□□ -0.84
PKNOX1-210ENST00000607049 GAGE4Q13068 117 aa9.78□□□□□ -0.84
PKNOX1-210ENST00000607049 GAGE5Q13069 117 aa9.78□□□□□ -0.84
PKNOX1-210ENST00000607049 GAGE13Q4V321 117 aa9.78□□□□□ -0.84
PKNOX1-210ENST00000607049 PRR27Q6MZM9 219 aa9.78□□□□□ -0.84
PKNOX1-210ENST00000607049 AKAP14Q86UN6 197 aa9.78□□□□□ -0.84
PKNOX1-210ENST00000607049 DAZAP1Q96EP5 407 aaKnown RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms