RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 C9orf85Q96MD7 179 aa9.84□□□□□ -0.83
NEDD8-MDP1-204ENST00000605847 SAMD10Q9BYL1 202 aa9.84□□□□□ -0.83
NEDD8-MDP1-204ENST00000605847 PARLQ9H300 379 aa9.84□□□□□ -0.83
NEDD8-MDP1-204ENST00000605847 V9GYH0 126 aa9.84□□□□□ -0.83
NEDD8-MDP1-204ENST00000605847 A8MWV9 139 aa9.83□□□□□ -0.84
NEDD8-MDP1-204ENST00000605847 PANO1I0J062 215 aa9.83□□□□□ -0.84
NEDD8-MDP1-204ENST00000605847 PRSS1P07477 247 aa9.83□□□□□ -0.84
NEDD8-MDP1-204ENST00000605847 RPL19P84098 196 aaKnown RBP9.83□□□□□ -0.84
NEDD8-MDP1-204ENST00000605847 ODF1Q14990 250 aa9.83□□□□□ -0.84
NEDD8-MDP1-204ENST00000605847 GOLT1AQ6ZVE7 132 aa9.83□□□□□ -0.84
NEDD8-MDP1-204ENST00000605847 LINC01600Q96MT4 127 aa9.83□□□□□ -0.84
NEDD8-MDP1-204ENST00000605847 BCL7BQ9BQE9 202 aa9.83□□□□□ -0.84
NEDD8-MDP1-204ENST00000605847 NDFIP1Q9BT67 221 aa9.83□□□□□ -0.84
NEDD8-MDP1-204ENST00000605847 C11orf1Q9H5F2 150 aa9.83□□□□□ -0.84
NEDD8-MDP1-204ENST00000605847 KCNIP2Q9NS61 270 aa9.83□□□□□ -0.84
NEDD8-MDP1-204ENST00000605847 TMEM262E9PQX1 116 aa9.82□□□□□ -0.84
NEDD8-MDP1-204ENST00000605847 TAAR5O14804 337 aa9.82□□□□□ -0.84
NEDD8-MDP1-204ENST00000605847 NOL3O60936 208 aaKnown RBP9.82□□□□□ -0.84
NEDD8-MDP1-204ENST00000605847 LGALSLQ3ZCW2 172 aaPredicted RBP9.82□□□□□ -0.84
NEDD8-MDP1-204ENST00000605847 OTORQ9NRC9 128 aa9.82□□□□□ -0.84
NEDD8-MDP1-204ENST00000605847 S100A5P33763 92 aa9.81□□□□□ -0.84
NEDD8-MDP1-204ENST00000605847 TMBIM6P55061 237 aa9.81□□□□□ -0.84
NEDD8-MDP1-204ENST00000605847 KHDC3LQ587J8 217 aa9.81□□□□□ -0.84
NEDD8-MDP1-204ENST00000605847 SDIM1Q6ZPB5 146 aa9.81□□□□□ -0.84
NEDD8-MDP1-204ENST00000605847 OR2G3Q8NGZ4 309 aa9.81□□□□□ -0.84
NEDD8-MDP1-204ENST00000605847 TVP23CQ96ET8 276 aa9.81□□□□□ -0.84
NEDD8-MDP1-204ENST00000605847 LINC00479Q96M42 142 aa9.81□□□□□ -0.84
NEDD8-MDP1-204ENST00000605847 MRPS26Q9BYN8 205 aaKnown RBP9.81□□□□□ -0.84
NEDD8-MDP1-204ENST00000605847 Q9UF83 564 aa9.81□□□□□ -0.84
NEDD8-MDP1-204ENST00000605847 TAS2R45P59539 299 aa9.8□□□□□ -0.84
NEDD8-MDP1-204ENST00000605847 TRIQKQ629K1 86 aa9.8□□□□□ -0.84
NEDD8-MDP1-204ENST00000605847 ENHOQ6UWT2 76 aa9.8□□□□□ -0.84
NEDD8-MDP1-204ENST00000605847 C14orf178Q8N769 122 aaPredicted RBP9.8□□□□□ -0.84
NEDD8-MDP1-204ENST00000605847 C15orf54Q8N8G6 183 aa9.8□□□□□ -0.84
NEDD8-MDP1-204ENST00000605847 C7orf33Q8WU49 177 aa9.8□□□□□ -0.84
NEDD8-MDP1-204ENST00000605847 CENPXA8MT69 81 aa9.79□□□□□ -0.84
NEDD8-MDP1-204ENST00000605847 C17orf112F2Z3M2 114 aa9.79□□□□□ -0.84
NEDD8-MDP1-204ENST00000605847 RNASE3P12724 160 aaKnown RBP9.79□□□□□ -0.84
NEDD8-MDP1-204ENST00000605847 S100A4P26447 101 aaKnown RBP9.79□□□□□ -0.84
NEDD8-MDP1-204ENST00000605847 TMEM75Q8N9X5 138 aa9.79□□□□□ -0.84
NEDD8-MDP1-204ENST00000605847 OR5C1Q8NGR4 320 aa9.79□□□□□ -0.84
NEDD8-MDP1-204ENST00000605847 KRTAP9-2Q9BYQ4 174 aa9.79□□□□□ -0.84
NEDD8-MDP1-204ENST00000605847 C11orf21Q9P2W6 132 aa9.79□□□□□ -0.84
NEDD8-MDP1-204ENST00000605847 GCGP01275 180 aa9.78□□□□□ -0.84
NEDD8-MDP1-204ENST00000605847 ANGP03950 147 aaKnown RBP9.78□□□□□ -0.84
NEDD8-MDP1-204ENST00000605847 ZFP69Q49AA0 526 aa9.78□□□□□ -0.84
NEDD8-MDP1-204ENST00000605847 ARL6IP6Q8N6S5 226 aa9.78□□□□□ -0.84
NEDD8-MDP1-204ENST00000605847 SGK494Q96LW2 274 aa9.78□□□□□ -0.84
NEDD8-MDP1-204ENST00000605847 MBD2Q9UBB5 411 aa9.78□□□□□ -0.84
NEDD8-MDP1-204ENST00000605847 PHOX2AO14813 284 aa9.77□□□□□ -0.85
NEDD8-MDP1-204ENST00000605847 ZNF80P51504 273 aaPredicted RBP9.77□□□□□ -0.85
NEDD8-MDP1-204ENST00000605847 NHLH2Q02577 135 aa9.77□□□□□ -0.85
NEDD8-MDP1-204ENST00000605847 RAB32Q13637 225 aa9.77□□□□□ -0.85
NEDD8-MDP1-204ENST00000605847 CIRBPQ14011 172 aaKnown RBP9.77□□□□□ -0.85
NEDD8-MDP1-204ENST00000605847 PIK3CD-AS1Q5SR53 167 aa9.77□□□□□ -0.85
NEDD8-MDP1-204ENST00000605847 OR10G7Q8NGN6 311 aa9.77□□□□□ -0.85
NEDD8-MDP1-204ENST00000605847 RNF185Q96GF1 192 aa9.77□□□□□ -0.85
NEDD8-MDP1-204ENST00000605847 OR5AC2Q9NZP5 309 aa9.77□□□□□ -0.85
NEDD8-MDP1-204ENST00000605847 A0A087WYN8 130 aa9.76□□□□□ -0.85
NEDD8-MDP1-204ENST00000605847 A0A0J9YXV3 536 aa9.76□□□□□ -0.85
NEDD8-MDP1-204ENST00000605847 RHODO00212 210 aa9.76□□□□□ -0.85
NEDD8-MDP1-204ENST00000605847 GNG5P63218 68 aa9.76□□□□□ -0.85
NEDD8-MDP1-204ENST00000605847 MIAQ16674 131 aa9.76□□□□□ -0.85
NEDD8-MDP1-204ENST00000605847 CNPY1Q3B7I2 92 aa9.76□□□□□ -0.85
NEDD8-MDP1-204ENST00000605847 FAM74A4Q5TZK3 123 aa9.76□□□□□ -0.85
NEDD8-MDP1-204ENST00000605847 WDR73Q6P4I2 378 aa9.76□□□□□ -0.85
NEDD8-MDP1-204ENST00000605847 WDR61Q9GZS3 305 aaKnown RBP9.76□□□□□ -0.85
NEDD8-MDP1-204ENST00000605847 JPT2Q9H910 190 aa9.76□□□□□ -0.85
NEDD8-MDP1-204ENST00000605847 H3BMQ9 156 aa9.75□□□□□ -0.85
NEDD8-MDP1-204ENST00000605847 CLRN3Q8NCR9 226 aa9.75□□□□□ -0.85
NEDD8-MDP1-204ENST00000605847 KIF25-AS1Q9Y6Z4 181 aa9.75□□□□□ -0.85
NEDD8-MDP1-204ENST00000605847 IGHV3-64A0A075B6Q5 118 aa9.74□□□□□ -0.85
NEDD8-MDP1-204ENST00000605847 K7EQM0 130 aa9.74□□□□□ -0.85
NEDD8-MDP1-204ENST00000605847 RPL36AP83881 106 aaKnown RBP9.74□□□□□ -0.85
NEDD8-MDP1-204ENST00000605847 SMUG1Q53HV7 270 aa9.74□□□□□ -0.85
NEDD8-MDP1-204ENST00000605847 UFSP1Q6NVU6 142 aa9.74□□□□□ -0.85
NEDD8-MDP1-204ENST00000605847 RPL36ALQ969Q0 106 aaKnown RBP9.74□□□□□ -0.85
NEDD8-MDP1-204ENST00000605847 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.73□□□□□ -0.85
NEDD8-MDP1-204ENST00000605847 SERTM2A0A1B0GWG4 89 aa9.73□□□□□ -0.85
NEDD8-MDP1-204ENST00000605847 BTCP35070 178 aa9.73□□□□□ -0.85
NEDD8-MDP1-204ENST00000605847 MPV17L2Q567V2 206 aa9.73□□□□□ -0.85
NEDD8-MDP1-204ENST00000605847 REG3GQ6UW15 175 aa9.73□□□□□ -0.85
NEDD8-MDP1-204ENST00000605847 GTSF1Q8WW33 167 aa9.73□□□□□ -0.85
NEDD8-MDP1-204ENST00000605847 EIF3GO75821 320 aaKnown RBP eCLIP9.72□□□□□ -0.851e-7■■■■□ 19.4
NEDD8-MDP1-204ENST00000605847 CHTF8P0CG12 524 aa9.72□□□□□ -0.85
NEDD8-MDP1-204ENST00000605847 PKIAP61925 76 aa9.72□□□□□ -0.85
NEDD8-MDP1-204ENST00000605847 CNBPP62633 177 aaKnown RBP9.72□□□□□ -0.85
NEDD8-MDP1-204ENST00000605847 AP5S1Q9NUS5 200 aa9.72□□□□□ -0.85
NEDD8-MDP1-204ENST00000605847 TRBV6-8A0A0A6YYG3 113 aa9.71□□□□□ -0.86
NEDD8-MDP1-204ENST00000605847 hDV102S1A0JD36 115 aa9.71□□□□□ -0.86
NEDD8-MDP1-204ENST00000605847 KRTAP10-8P60410 259 aa9.71□□□□□ -0.86
NEDD8-MDP1-204ENST00000605847 PQLC2Q6ZP29 291 aa9.71□□□□□ -0.86
NEDD8-MDP1-204ENST00000605847 SPACA4Q8TDM5 124 aa9.71□□□□□ -0.86
NEDD8-MDP1-204ENST00000605847 CHCHD5Q9BSY4 110 aa9.71□□□□□ -0.86
NEDD8-MDP1-204ENST00000605847 PSG8Q9UQ74 426 aa9.71□□□□□ -0.86
NEDD8-MDP1-204ENST00000605847 TRBV7-3A0A075B6L6 115 aa9.7□□□□□ -0.86
NEDD8-MDP1-204ENST00000605847 A0A087WWL8 130 aa9.7□□□□□ -0.86
NEDD8-MDP1-204ENST00000605847 TRBV10-1A0A0K0K1A3 114 aa9.7□□□□□ -0.86
NEDD8-MDP1-204ENST00000605847 UBE2D3P61077 147 aa9.7□□□□□ -0.86
NEDD8-MDP1-204ENST00000605847 UBE2D2P62837 147 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms