RNA–Protein interactions for RNA: ENST00000604213.1

LYSMD4-211, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best)

Gene LYSMD4, Length 2,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-211ENST00000604213 DUSP14O95147 198 aaKnown RBP11.55□□□□□ -0.56
LYSMD4-211ENST00000604213 MT-ATP8P03928 68 aa11.55□□□□□ -0.56
LYSMD4-211ENST00000604213 SPINK8P0C7L1 97 aa11.55□□□□□ -0.56
LYSMD4-211ENST00000604213 S100A4P26447 101 aaKnown RBP11.55□□□□□ -0.56
LYSMD4-211ENST00000604213 C9orf139Q6ZV77 190 aa11.55□□□□□ -0.56
LYSMD4-211ENST00000604213 NDUFA11Q86Y39 141 aa11.55□□□□□ -0.56
LYSMD4-211ENST00000604213 LINC00477Q96M19 166 aa11.55□□□□□ -0.56
LYSMD4-211ENST00000604213 SIRPDQ9H106 197 aa11.55□□□□□ -0.56
LYSMD4-211ENST00000604213 GEMIN7Q9H840 131 aaKnown RBP11.55□□□□□ -0.56
LYSMD4-211ENST00000604213 PHLDA3Q9Y5J5 127 aa11.55□□□□□ -0.56
LYSMD4-211ENST00000604213 A0A0J9YY99 117 aa11.54□□□□□ -0.56
LYSMD4-211ENST00000604213 TSHBP01222 138 aa11.54□□□□□ -0.56
LYSMD4-211ENST00000604213 TRAV26-1A0A087WT03 109 aa11.54□□□□□ -0.56
LYSMD4-211ENST00000604213 ANXA2RQ3ZCQ2 193 aa11.54□□□□□ -0.56
LYSMD4-211ENST00000604213 PPDPFLQ8WWR9 84 aa11.54□□□□□ -0.56
LYSMD4-211ENST00000604213 WFDC12Q8WWY7 111 aa11.54□□□□□ -0.56
LYSMD4-211ENST00000604213 XGP55808 180 aa11.53□□□□□ -0.56
LYSMD4-211ENST00000604213 Q6ZUT4 128 aa11.53□□□□□ -0.56
LYSMD4-211ENST00000604213 TCL1BO95988 128 aa11.53□□□□□ -0.56
LYSMD4-211ENST00000604213 MED14OSP0DP75 135 aa11.53□□□□□ -0.56
LYSMD4-211ENST00000604213 C11orf71Q6IPW1 123 aa11.53□□□□□ -0.56
LYSMD4-211ENST00000604213 POM121L12Q8N7R1 296 aa11.53□□□□□ -0.56
LYSMD4-211ENST00000604213 CACNA1BQ00975 2339 aa11.53□□□□□ -0.56
LYSMD4-211ENST00000604213 PPP1R17O96001 155 aa11.52□□□□□ -0.57
LYSMD4-211ENST00000604213 DEFB1P60022 68 aa11.52□□□□□ -0.57
LYSMD4-211ENST00000604213 FBXL19-AS1Q494R0 122 aa11.52□□□□□ -0.57
LYSMD4-211ENST00000604213 Q5PR19 223 aa11.52□□□□□ -0.57
LYSMD4-211ENST00000604213 LYRM7Q5U5X0 104 aa11.52□□□□□ -0.57
LYSMD4-211ENST00000604213 TEN1Q86WV5 123 aa11.52□□□□□ -0.57
LYSMD4-211ENST00000604213 SBSPONQ8IVN8 264 aa11.52□□□□□ -0.57
LYSMD4-211ENST00000604213 TTC28Q96AY4 2481 aa11.52□□□□□ -0.57
LYSMD4-211ENST00000604213 IGIPA6NJ69 53 aa11.52□□□□□ -0.57
LYSMD4-211ENST00000604213 OR10J6PQ8NGY7 276 aa11.52□□□□□ -0.57
LYSMD4-211ENST00000604213 IGHV1-69DA0A0B4J2H0 117 aa11.51□□□□□ -0.57
LYSMD4-211ENST00000604213 GNRH2O43555 120 aa11.51□□□□□ -0.57
LYSMD4-211ENST00000604213 CFC1BP0CG36 223 aa11.51□□□□□ -0.57
LYSMD4-211ENST00000604213 CFC1P0CG37 223 aa11.51□□□□□ -0.57
LYSMD4-211ENST00000604213 RNASE3P12724 160 aaKnown RBP11.51□□□□□ -0.57
LYSMD4-211ENST00000604213 EMP1P54849 157 aa11.51□□□□□ -0.57
LYSMD4-211ENST00000604213 HERVK_113P61574 105 aa11.51□□□□□ -0.57
LYSMD4-211ENST00000604213 Q6ZS46 218 aa11.51□□□□□ -0.57
LYSMD4-211ENST00000604213 SOCS3O14543 225 aa11.5□□□□□ -0.57
LYSMD4-211ENST00000604213 OVOL1O14753 267 aa11.5□□□□□ -0.57
LYSMD4-211ENST00000604213 IGHV3-30P01768 117 aa11.5□□□□□ -0.57
LYSMD4-211ENST00000604213 IGHV3-30-5P0DP03 117 aa11.5□□□□□ -0.57
LYSMD4-211ENST00000604213 RNASE4P34096 147 aaKnown RBP11.5□□□□□ -0.57
LYSMD4-211ENST00000604213 TSPEAR-AS2P59090 65 aa11.5□□□□□ -0.57
LYSMD4-211ENST00000604213 PAPPA-AS1Q5QFB9 102 aa11.5□□□□□ -0.57
LYSMD4-211ENST00000604213 FAM19A4Q96LR4 140 aa11.5□□□□□ -0.57
LYSMD4-211ENST00000604213 TP53TG1Q9Y2A0 90 aa11.5□□□□□ -0.57
LYSMD4-211ENST00000604213 TRBV20-1A0A075B6N2 111 aa11.5□□□□□ -0.57
LYSMD4-211ENST00000604213 UBE2E1P51965 193 aa11.5□□□□□ -0.57
LYSMD4-211ENST00000604213 LINC00315P59091 139 aa11.5□□□□□ -0.57
LYSMD4-211ENST00000604213 KIF25-AS1Q9Y6Z4 181 aa11.5□□□□□ -0.57
LYSMD4-211ENST00000604213 RPL32P62910 135 aaKnown RBP11.49□□□□□ -0.57
LYSMD4-211ENST00000604213 PMVKQ15126 192 aa11.49□□□□□ -0.57
LYSMD4-211ENST00000604213 SLC25A29Q8N8R3 303 aa11.49□□□□□ -0.57
LYSMD4-211ENST00000604213 ZNF292O60281 2723 aa11.49□□□□□ -0.57
LYSMD4-211ENST00000604213 NXPH4O95158 308 aa11.49□□□□□ -0.57
LYSMD4-211ENST00000604213 SAA4P35542 130 aa11.49□□□□□ -0.57
LYSMD4-211ENST00000604213 IGHV4OR15-8A0A075B7B6 117 aa11.48□□□□□ -0.57
LYSMD4-211ENST00000604213 A0A087WW49 117 aa11.48□□□□□ -0.57
LYSMD4-211ENST00000604213 APRG1Q8IVJ8 170 aa11.48□□□□□ -0.57
LYSMD4-211ENST00000604213 A8MWV9 139 aa11.48□□□□□ -0.57
LYSMD4-211ENST00000604213 CDSNQ15517 529 aa11.48□□□□□ -0.57
LYSMD4-211ENST00000604213 UNQ9165/PRO28630Q6UXU0 137 aa11.48□□□□□ -0.57
LYSMD4-211ENST00000604213 C10orf126Q8N4M7 172 aa11.48□□□□□ -0.57
LYSMD4-211ENST00000604213 C5orf56Q8N8D9 126 aa11.48□□□□□ -0.57
LYSMD4-211ENST00000604213 AMELXQ99217 191 aa11.48□□□□□ -0.57
LYSMD4-211ENST00000604213 VCX2Q9H322 139 aa11.48□□□□□ -0.57
LYSMD4-211ENST00000604213 HRNRQ86YZ3 2850 aaPredicted RBP11.47□□□□□ -0.57
LYSMD4-211ENST00000604213 POLR2KP53803 58 aaKnown RBP11.47□□□□□ -0.57
LYSMD4-211ENST00000604213 RPL39P62891 51 aaKnown RBP11.47□□□□□ -0.57
LYSMD4-211ENST00000604213 SVIPQ8NHG7 77 aa11.47□□□□□ -0.57
LYSMD4-211ENST00000604213 DEFB104AQ8WTQ1 72 aa11.47□□□□□ -0.57
LYSMD4-211ENST00000604213 TMEM141Q96I45 108 aa11.47□□□□□ -0.57
LYSMD4-211ENST00000604213 MED13LQ71F56 2210 aa11.47□□□□□ -0.57
LYSMD4-211ENST00000604213 F6UB75 175 aa11.46□□□□□ -0.57
LYSMD4-211ENST00000604213 ZNF688P0C7X2 276 aa11.46□□□□□ -0.57
LYSMD4-211ENST00000604213 ARL3P36405 182 aa11.46□□□□□ -0.57
LYSMD4-211ENST00000604213 C19orf54Q5BKX5 351 aa11.46□□□□□ -0.57
LYSMD4-211ENST00000604213 ANKRD29Q8N6D5 301 aa11.46□□□□□ -0.57
LYSMD4-211ENST00000604213 ZNRF2Q8NHG8 242 aa11.46□□□□□ -0.57
LYSMD4-211ENST00000604213 PRO1854Q9UHT4 67 aa11.46□□□□□ -0.57
LYSMD4-211ENST00000604213 FAM223BA6NKX1 122 aa11.46□□□□□ -0.58
LYSMD4-211ENST00000604213 TGFAP01135 160 aa11.46□□□□□ -0.58
LYSMD4-211ENST00000604213 FAM223AQ8IWN6 122 aa11.46□□□□□ -0.58
LYSMD4-211ENST00000604213 TIMM17AQ99595 171 aa11.46□□□□□ -0.58
LYSMD4-211ENST00000604213 SVEP1Q4LDE5 3571 aa11.45□□□□□ -0.58
LYSMD4-211ENST00000604213 MUC4Q99102 2169 aa11.45□□□□□ -0.58
LYSMD4-211ENST00000604213 TRAV41A0A0B4J266 112 aa11.45□□□□□ -0.58
LYSMD4-211ENST00000604213 TRBV12-3P01733 135 aa11.45□□□□□ -0.58
LYSMD4-211ENST00000604213 TMEM170BQ5T4T1 132 aa11.45□□□□□ -0.58
LYSMD4-211ENST00000604213 SUMO4Q6EEV6 95 aa11.45□□□□□ -0.58
LYSMD4-211ENST00000604213 KIR2DL4Q99706 377 aa11.45□□□□□ -0.58
LYSMD4-211ENST00000604213 VCYO14598 125 aa11.45□□□□□ -0.58
LYSMD4-211ENST00000604213 ZNF876PQ49A33 203 aa11.45□□□□□ -0.58
LYSMD4-211ENST00000604213 JPT2Q9H910 190 aa11.45□□□□□ -0.58
LYSMD4-211ENST00000604213 LINC00527Q9UJ94 153 aa11.45□□□□□ -0.58
LYSMD4-211ENST00000604213 TLN1Q9Y490 2541 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms