RNA–Protein interactions for RNA: ENST00000600778.3

SOX2-OT-233, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 762 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-233ENST00000600778 TRGV4A0A0C4DH28 118 aa7.96□□□□□ -1.14
SOX2-OT-233ENST00000600778 IGHV3-16A0A0C4DH30 117 aa7.96□□□□□ -1.14
SOX2-OT-233ENST00000600778 A0A1W2PPQ1 181 aa7.96□□□□□ -1.14
SOX2-OT-233ENST00000600778 C16orf90A8MZG2 172 aa7.96□□□□□ -1.14
SOX2-OT-233ENST00000600778 LTAP01374 205 aa7.96□□□□□ -1.14
SOX2-OT-233ENST00000600778 TYMSP04818 313 aa7.96□□□□□ -1.14
SOX2-OT-233ENST00000600778 S100A9P06702 114 aaKnown RBP7.96□□□□□ -1.14
SOX2-OT-233ENST00000600778 SFTA3P0C7M3 94 aa7.96□□□□□ -1.14
SOX2-OT-233ENST00000600778 BLOC1S1P78537 153 aa7.96□□□□□ -1.14
SOX2-OT-233ENST00000600778 COX8CQ7Z4L0 72 aa7.96□□□□□ -1.14
SOX2-OT-233ENST00000600778 ZNF479Q96JC4 524 aa7.96□□□□□ -1.14
SOX2-OT-233ENST00000600778 KCNS1Q96KK3 526 aa7.96□□□□□ -1.14
SOX2-OT-233ENST00000600778 TXNDC17Q9BRA2 123 aa7.96□□□□□ -1.14
SOX2-OT-233ENST00000600778 SPXQ9BT56 116 aa7.96□□□□□ -1.14
SOX2-OT-233ENST00000600778 SDF2L1Q9HCN8 221 aa7.96□□□□□ -1.14
SOX2-OT-233ENST00000600778 FABP5P3A8MUU1 101 aa7.95□□□□□ -1.14
SOX2-OT-233ENST00000600778 SIVA1O15304 175 aa7.95□□□□□ -1.14
SOX2-OT-233ENST00000600778 IFNA1P01562 189 aa7.95□□□□□ -1.14
SOX2-OT-233ENST00000600778 CRIP1P50238 77 aa7.95□□□□□ -1.14
SOX2-OT-233ENST00000600778 BAGE2Q86Y30 109 aa7.95□□□□□ -1.14
SOX2-OT-233ENST00000600778 ZC2HC1AQ96GY0 325 aa7.95□□□□□ -1.14
SOX2-OT-233ENST00000600778 IGKV3D-20A0A0C4DH25 116 aa7.94□□□□□ -1.14
SOX2-OT-233ENST00000600778 NXPH4O95158 308 aa7.94□□□□□ -1.14
SOX2-OT-233ENST00000600778 BCL2P10415 239 aa7.94□□□□□ -1.14
SOX2-OT-233ENST00000600778 SMCPP49901 116 aaPredicted RBP7.94□□□□□ -1.14
SOX2-OT-233ENST00000600778 MRPL23Q16540 153 aaKnown RBP7.94□□□□□ -1.14
SOX2-OT-233ENST00000600778 LYPD5Q6UWN5 251 aa7.94□□□□□ -1.14
SOX2-OT-233ENST00000600778 SPATA12Q7Z6I5 190 aa7.94□□□□□ -1.14
SOX2-OT-233ENST00000600778 LYPD6BQ8NI32 183 aa7.94□□□□□ -1.14
SOX2-OT-233ENST00000600778 RASL10AQ92737 203 aa7.94□□□□□ -1.14
SOX2-OT-233ENST00000600778 C11orf52Q96A22 123 aa7.94□□□□□ -1.14
SOX2-OT-233ENST00000600778 MUC4Q99102 2169 aa7.94□□□□□ -1.14
SOX2-OT-233ENST00000600778 APOBP04114 4563 aaKnown RBP7.94□□□□□ -1.14
SOX2-OT-233ENST00000600778 TAGLN2P37802 199 aaKnown RBP7.93□□□□□ -1.14
SOX2-OT-233ENST00000600778 RPL35P42766 123 aaKnown RBP7.93□□□□□ -1.14
SOX2-OT-233ENST00000600778 LINC00315P59091 139 aa7.93□□□□□ -1.14
SOX2-OT-233ENST00000600778 MEF2BQ02080 365 aaPredicted RBP7.93□□□□□ -1.14
SOX2-OT-233ENST00000600778 ZNF674Q2M3X9 581 aa7.93□□□□□ -1.14
SOX2-OT-233ENST00000600778 FAM162BQ5T6X4 162 aa7.93□□□□□ -1.14
SOX2-OT-233ENST00000600778 NEGR1Q7Z3B1 354 aa7.93□□□□□ -1.14
SOX2-OT-233ENST00000600778 OR4C5Q8NGB2 326 aa7.93□□□□□ -1.14
SOX2-OT-233ENST00000600778 VAX2Q9UIW0 290 aa7.93□□□□□ -1.14
SOX2-OT-233ENST00000600778 TRAV4A0A0B4J268 109 aa7.92□□□□□ -1.14
SOX2-OT-233ENST00000600778 J3QL48 77 aa7.92□□□□□ -1.14
SOX2-OT-233ENST00000600778 K7EQD1 137 aa7.92□□□□□ -1.14
SOX2-OT-233ENST00000600778 M0R2P5 195 aa7.92□□□□□ -1.14
SOX2-OT-233ENST00000600778 PDE6DO43924 150 aa7.92□□□□□ -1.14
SOX2-OT-233ENST00000600778 SH2D1AO60880 128 aa7.92□□□□□ -1.14
SOX2-OT-233ENST00000600778 ORM1P02763 201 aa7.92□□□□□ -1.14
SOX2-OT-233ENST00000600778 GYPEP15421 78 aa7.92□□□□□ -1.14
SOX2-OT-233ENST00000600778 NHLRC2Q8NBF2 726 aa7.92□□□□□ -1.14
SOX2-OT-233ENST00000600778 PCNPQ8WW12 178 aaKnown RBP7.92□□□□□ -1.14
SOX2-OT-233ENST00000600778 MLST8Q9BVC4 326 aa7.92□□□□□ -1.14
SOX2-OT-233ENST00000600778 MED9Q9NWA0 146 aa7.92□□□□□ -1.14
SOX2-OT-233ENST00000600778 KRBOX1C9JBD0 128 aa7.91□□□□□ -1.14
SOX2-OT-233ENST00000600778 BTF3P20290 206 aaKnown RBP7.91□□□□□ -1.14
SOX2-OT-233ENST00000600778 SRIP30626 198 aa7.91□□□□□ -1.14
SOX2-OT-233ENST00000600778 C9orf85Q96MD7 179 aa7.91□□□□□ -1.14
SOX2-OT-233ENST00000600778 DERL1Q9BUN8 251 aa7.91□□□□□ -1.14
SOX2-OT-233ENST00000600778 RAB19A4D1S5 217 aa7.9□□□□□ -1.14
SOX2-OT-233ENST00000600778 RBFOX3A6NFN3 312 aa7.9□□□□□ -1.14
SOX2-OT-233ENST00000600778 B4DEV8 164 aa7.9□□□□□ -1.14
SOX2-OT-233ENST00000600778 C9JCJ5 164 aa7.9□□□□□ -1.14
SOX2-OT-233ENST00000600778 M0R036 132 aa7.9□□□□□ -1.14
SOX2-OT-233ENST00000600778 RNASE3P12724 160 aaKnown RBP7.9□□□□□ -1.14
SOX2-OT-233ENST00000600778 ASIPP42127 132 aa7.9□□□□□ -1.14
SOX2-OT-233ENST00000600778 LINC01559Q495D7 138 aa7.9□□□□□ -1.14
SOX2-OT-233ENST00000600778 TNFRSF18Q9Y5U5 241 aa7.9□□□□□ -1.14
SOX2-OT-233ENST00000600778 ABCA13Q86UQ4 5058 aa7.89□□□□□ -1.15
SOX2-OT-233ENST00000600778 LOC100131303A0A0U1RQF7 123 aa7.89□□□□□ -1.15
SOX2-OT-233ENST00000600778 GRIFINA4D1Z8 144 aa7.89□□□□□ -1.15
SOX2-OT-233ENST00000600778 S100A4P26447 101 aaKnown RBP7.89□□□□□ -1.15
SOX2-OT-233ENST00000600778 KRTAP10-2P60368 255 aa7.89□□□□□ -1.15
SOX2-OT-233ENST00000600778 CENPWQ5EE01 88 aa7.89□□□□□ -1.15
SOX2-OT-233ENST00000600778 ZNF506Q5JVG8 444 aa7.89□□□□□ -1.15
SOX2-OT-233ENST00000600778 DNLZQ5SXM8 178 aa7.89□□□□□ -1.15
SOX2-OT-233ENST00000600778 TEX261Q6UWH6 196 aa7.89□□□□□ -1.15
SOX2-OT-233ENST00000600778 Q6ZRN7 208 aaPredicted RBP7.89□□□□□ -1.15
SOX2-OT-233ENST00000600778 PTH2Q96A98 100 aa7.89□□□□□ -1.15
SOX2-OT-233ENST00000600778 LY96Q9Y6Y9 160 aa7.89□□□□□ -1.15
SOX2-OT-233ENST00000600778 TRAV9-2A0A087WT02 112 aa7.88□□□□□ -1.15
SOX2-OT-233ENST00000600778 TMSB15BA0A087X1C1 80 aa7.88□□□□□ -1.15
SOX2-OT-233ENST00000600778 CDK2AP2O75956 126 aa7.88□□□□□ -1.15
SOX2-OT-233ENST00000600778 IGLV2-8P01709 118 aa7.88□□□□□ -1.15
SOX2-OT-233ENST00000600778 GNG4P50150 75 aa7.88□□□□□ -1.15
SOX2-OT-233ENST00000600778 ZNF876PQ49A33 203 aa7.88□□□□□ -1.15
SOX2-OT-233ENST00000600778 WFDC10BQ8IUB3 73 aa7.88□□□□□ -1.15
SOX2-OT-233ENST00000600778 KRTAP4-5Q9BYR2 181 aa7.88□□□□□ -1.15
SOX2-OT-233ENST00000600778 IGHV3-73A0A0B4J1V6 119 aa7.87□□□□□ -1.15
SOX2-OT-233ENST00000600778 PGPEP1LA6NFU8 196 aa7.87□□□□□ -1.15
SOX2-OT-233ENST00000600778 H3BVH4 76 aa7.87□□□□□ -1.15
SOX2-OT-233ENST00000600778 RS1O15537 224 aa7.87□□□□□ -1.15
SOX2-OT-233ENST00000600778 ARMS2P0C7Q2 107 aa7.87□□□□□ -1.15
SOX2-OT-233ENST00000600778 GATA1P15976 413 aaPredicted RBP7.87□□□□□ -1.15
SOX2-OT-233ENST00000600778 PRR27Q6MZM9 219 aa7.87□□□□□ -1.15
SOX2-OT-233ENST00000600778 SMIM12Q96EX1 92 aa7.87□□□□□ -1.15
SOX2-OT-233ENST00000600778 SCRT2Q9NQ03 307 aa7.87□□□□□ -1.15
SOX2-OT-233ENST00000600778 IL36BQ9NZH7 164 aa7.87□□□□□ -1.15
SOX2-OT-233ENST00000600778 TMEM250H0YL14 139 aa7.86□□□□□ -1.15
SOX2-OT-233ENST00000600778 MGST1P10620 155 aaKnown RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms