RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 MGST1P10620 155 aaKnown RBP10.7□□□□□ -0.7
VRK3-221ENST00000600284 DPPA3Q6W0C5 159 aa10.7□□□□□ -0.7
VRK3-221ENST00000600284 LINC00479Q96M42 142 aa10.7□□□□□ -0.7
VRK3-221ENST00000600284 ARL2-SNX15V9GYD0 113 aa10.7□□□□□ -0.7
VRK3-221ENST00000600284 APOBP04114 4563 aaKnown RBP10.69□□□□□ -0.7
VRK3-221ENST00000600284 IGHV3-38A0A0C4DH36 116 aa10.69□□□□□ -0.7
VRK3-221ENST00000600284 FAM74A7A6NL05 159 aa10.69□□□□□ -0.7
VRK3-221ENST00000600284 G3V3Q6 166 aa10.69□□□□□ -0.7
VRK3-221ENST00000600284 CRYGDP07320 174 aa10.69□□□□□ -0.7
VRK3-221ENST00000600284 ZNF506Q5JVG8 444 aa10.69□□□□□ -0.7
VRK3-221ENST00000600284 Q8N1X5 172 aa10.69□□□□□ -0.7
VRK3-221ENST00000600284 A0A087WTM6 91 aa10.68□□□□□ -0.7
VRK3-221ENST00000600284 TRAV8-6A0A0B4J262 113 aa10.68□□□□□ -0.7
VRK3-221ENST00000600284 TRAV34A0A0B4J273 112 aa10.68□□□□□ -0.7
VRK3-221ENST00000600284 IGKV3D-20A0A0C4DH25 116 aa10.68□□□□□ -0.7
VRK3-221ENST00000600284 PEX7O00628 323 aa10.68□□□□□ -0.7
VRK3-221ENST00000600284 S100A4P26447 101 aaKnown RBP10.68□□□□□ -0.7
VRK3-221ENST00000600284 UBE2G2P60604 165 aa10.68□□□□□ -0.7
VRK3-221ENST00000600284 LINC01556Q5JQF7 62 aa10.68□□□□□ -0.7
VRK3-221ENST00000600284 ZFP2Q6ZN57 461 aa10.68□□□□□ -0.7
VRK3-221ENST00000600284 COX8CQ7Z4L0 72 aa10.68□□□□□ -0.7
VRK3-221ENST00000600284 CYTL1Q9NRR1 136 aa10.68□□□□□ -0.7
VRK3-221ENST00000600284 ZFP30Q9Y2G7 519 aa10.68□□□□□ -0.7
VRK3-221ENST00000600284 IGHV3-73A0A0B4J1V6 119 aa10.67□□□□□ -0.7
VRK3-221ENST00000600284 A8MWV9 139 aa10.67□□□□□ -0.7
VRK3-221ENST00000600284 ARPC5O15511 151 aa10.67□□□□□ -0.7
VRK3-221ENST00000600284 ASIPP42127 132 aa10.67□□□□□ -0.7
VRK3-221ENST00000600284 FGF8P55075 233 aaPredicted RBP10.67□□□□□ -0.7
VRK3-221ENST00000600284 TCEAL7Q9BRU2 100 aa10.67□□□□□ -0.7
VRK3-221ENST00000600284 MAP1LC3B2A6NCE7 125 aa10.66□□□□□ -0.7
VRK3-221ENST00000600284 FHITP49789 147 aa10.66□□□□□ -0.7
VRK3-221ENST00000600284 DNLZQ5SXM8 178 aa10.66□□□□□ -0.7
VRK3-221ENST00000600284 LELP1Q5T871 98 aa10.66□□□□□ -0.7
VRK3-221ENST00000600284 Q86TA4 180 aa10.66□□□□□ -0.7
VRK3-221ENST00000600284 STOML3Q8TAV4 291 aa10.66□□□□□ -0.7
VRK3-221ENST00000600284 MAP1LC3BQ9GZQ8 125 aa10.66□□□□□ -0.7
VRK3-221ENST00000600284 GTSF1LQ9H1H1 148 aa10.66□□□□□ -0.7
VRK3-221ENST00000600284 IL36BQ9NZH7 164 aa10.66□□□□□ -0.7
VRK3-221ENST00000600284 IBA57-AS1B1ANH7 110 aa10.65□□□□□ -0.7
VRK3-221ENST00000600284 OR10J3Q5JRS4 329 aa10.65□□□□□ -0.7
VRK3-221ENST00000600284 ATP6V0E2Q8NHE4 81 aa10.65□□□□□ -0.7
VRK3-221ENST00000600284 FMC1Q96HJ9 113 aa10.65□□□□□ -0.7
VRK3-221ENST00000600284 PARLQ9H300 379 aa10.65□□□□□ -0.7
VRK3-221ENST00000600284 TRBV6-1A0A0K0K1D8 114 aa10.64□□□□□ -0.71
VRK3-221ENST00000600284 B4DEV8 164 aa10.64□□□□□ -0.71
VRK3-221ENST00000600284 LGALSLQ3ZCW2 172 aaPredicted RBP10.64□□□□□ -0.71
VRK3-221ENST00000600284 SCRT2Q9NQ03 307 aa10.64□□□□□ -0.71
VRK3-221ENST00000600284 KRBOX1C9JBD0 128 aa10.63□□□□□ -0.71
VRK3-221ENST00000600284 CRIP1P50238 77 aa10.63□□□□□ -0.71
VRK3-221ENST00000600284 UBE2G1P62253 170 aa10.63□□□□□ -0.71
VRK3-221ENST00000600284 ZNF345Q14585 488 aa10.63□□□□□ -0.71
VRK3-221ENST00000600284 FAM162BQ5T6X4 162 aa10.63□□□□□ -0.71
VRK3-221ENST00000600284 ZC2HC1AQ96GY0 325 aa10.63□□□□□ -0.71
VRK3-221ENST00000600284 SEC11BP0C7V7 166 aa10.62□□□□□ -0.71
VRK3-221ENST00000600284 UFSP1Q6NVU6 142 aa10.62□□□□□ -0.71
VRK3-221ENST00000600284 Q6ZSN1 163 aa10.62□□□□□ -0.71
VRK3-221ENST00000600284 KCNRGQ8N5I3 272 aa10.62□□□□□ -0.71
VRK3-221ENST00000600284 SYT8Q8NBV8 401 aa10.62□□□□□ -0.71
VRK3-221ENST00000600284 HMSDA8MTL9 139 aa10.61□□□□□ -0.71
VRK3-221ENST00000600284 UMAD1C9J7I0 102 aa10.61□□□□□ -0.71
VRK3-221ENST00000600284 RHODO00212 210 aa10.61□□□□□ -0.71
VRK3-221ENST00000600284 PSCAO43653 123 aa10.61□□□□□ -0.71
VRK3-221ENST00000600284 SH2D1AO60880 128 aa10.61□□□□□ -0.71
VRK3-221ENST00000600284 LTAP01374 205 aa10.61□□□□□ -0.71
VRK3-221ENST00000600284 ARMS2P0C7Q2 107 aa10.61□□□□□ -0.71
VRK3-221ENST00000600284 LINC00694P0DN24 101 aa10.61□□□□□ -0.71
VRK3-221ENST00000600284 ZNF674Q2M3X9 581 aa10.61□□□□□ -0.71
VRK3-221ENST00000600284 DMRTA1Q5VZB9 504 aa10.61□□□□□ -0.71
VRK3-221ENST00000600284 CST9LP1Q5W188 147 aa10.61□□□□□ -0.71
VRK3-221ENST00000600284 H3BVH4 76 aa10.6□□□□□ -0.71
VRK3-221ENST00000600284 S100A9P06702 114 aaKnown RBP10.6□□□□□ -0.71
VRK3-221ENST00000600284 LAGE3Q14657 143 aa10.6□□□□□ -0.71
VRK3-221ENST00000600284 LINC01559Q495D7 138 aa10.6□□□□□ -0.71
VRK3-221ENST00000600284 OR11H4Q8NGC9 324 aa10.6□□□□□ -0.71
VRK3-221ENST00000600284 MBD3L1Q8WWY6 194 aa10.6□□□□□ -0.71
VRK3-221ENST00000600284 JPT2Q9H910 190 aa10.6□□□□□ -0.71
VRK3-221ENST00000600284 A0A087WWC5 75 aa10.59□□□□□ -0.71
VRK3-221ENST00000600284 A0A0D9SG52 128 aa10.59□□□□□ -0.71
VRK3-221ENST00000600284 LRCOL1A6NCL2 159 aa10.59□□□□□ -0.71
VRK3-221ENST00000600284 GAGE12JA6NER3 117 aa10.59□□□□□ -0.71
VRK3-221ENST00000600284 SMLR1H3BR10 107 aa10.59□□□□□ -0.71
VRK3-221ENST00000600284 FUSP35637 526 aaKnown RBP eCLIP10.59□□□□□ -0.71
VRK3-221ENST00000600284 GAGE1Q13065 139 aa10.59□□□□□ -0.71
VRK3-221ENST00000600284 GAGE4Q13068 117 aa10.59□□□□□ -0.71
VRK3-221ENST00000600284 GAGE5Q13069 117 aa10.59□□□□□ -0.71
VRK3-221ENST00000600284 GAGE13Q4V321 117 aa10.59□□□□□ -0.71
VRK3-221ENST00000600284 NTN5Q8WTR8 489 aaPredicted RBP10.59□□□□□ -0.71
VRK3-221ENST00000600284 PHLDA3Q9Y5J5 127 aa10.59□□□□□ -0.71
VRK3-221ENST00000600284 GRIFINA4D1Z8 144 aa10.58□□□□□ -0.72
VRK3-221ENST00000600284 M0R036 132 aa10.58□□□□□ -0.72
VRK3-221ENST00000600284 PAGE4O60829 102 aa10.58□□□□□ -0.72
VRK3-221ENST00000600284 IGHV3-30P01768 117 aa10.58□□□□□ -0.72
VRK3-221ENST00000600284 IGHV3-33P01772 117 aa10.58□□□□□ -0.72
VRK3-221ENST00000600284 IGHV3-30-3P0DP02 117 aa10.58□□□□□ -0.72
VRK3-221ENST00000600284 IGHV3-30-5P0DP03 117 aa10.58□□□□□ -0.72
VRK3-221ENST00000600284 TPT1P13693 172 aaKnown RBP10.58□□□□□ -0.72
VRK3-221ENST00000600284 GCSHP23434 173 aa10.58□□□□□ -0.72
VRK3-221ENST00000600284 AKR1C3P42330 323 aa10.58□□□□□ -0.72
VRK3-221ENST00000600284 XGP55808 180 aa10.58□□□□□ -0.72
VRK3-221ENST00000600284 SFT2D1Q8WV19 159 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms