RNA–Protein interactions for RNA: ENST00000599460.5

SYMPK-213, Transcript of symplekin, humanhuman

TSL 1 (best) BASIC

Gene SYMPK, Length 5,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-213ENST00000599460 SAMD5Q5TGI4 173 aa11.38□□□□□ -0.59
SYMPK-213ENST00000599460 POLR3KQ9Y2Y1 108 aaPredicted RBP11.38□□□□□ -0.59
SYMPK-213ENST00000599460 U3KQE9 123 aa11.38□□□□□ -0.59
SYMPK-213ENST00000599460 ESDP10768 282 aa11.37□□□□□ -0.59
SYMPK-213ENST00000599460 SFTA2Q6UW10 78 aa11.37□□□□□ -0.59
SYMPK-213ENST00000599460 MRAPQ8TCY5 172 aa11.37□□□□□ -0.59
SYMPK-213ENST00000599460 SIGLEC8Q9NYZ4 499 aa11.37□□□□□ -0.59
SYMPK-213ENST00000599460 COX11Q9Y6N1 276 aa11.37□□□□□ -0.59
SYMPK-213ENST00000599460 PSCAO43653 123 aa11.37□□□□□ -0.59
SYMPK-213ENST00000599460 C6orf226Q5I0X4 101 aa11.37□□□□□ -0.59
SYMPK-213ENST00000599460 IGF2BP2-AS1Q96M15 143 aa11.37□□□□□ -0.59
SYMPK-213ENST00000599460 WIPF2Q8TF74 440 aaPredicted RBP11.37□□□□□ -0.59
SYMPK-213ENST00000599460 HIVEP2P31629 2446 aa11.36□□□□□ -0.59
SYMPK-213ENST00000599460 TMEM238C9JI98 176 aa11.36□□□□□ -0.59
SYMPK-213ENST00000599460 TMEM141Q96I45 108 aa11.36□□□□□ -0.59
SYMPK-213ENST00000599460 TIMM21Q9BVV7 248 aa11.36□□□□□ -0.59
SYMPK-213ENST00000599460 CRYGBP07316 175 aa11.36□□□□□ -0.59
SYMPK-213ENST00000599460 PLA2G2AP14555 144 aa11.36□□□□□ -0.59
SYMPK-213ENST00000599460 IGHG4P01861 327 aa11.35□□□□□ -0.59
SYMPK-213ENST00000599460 SRSF2Q01130 221 aaKnown RBP11.35□□□□□ -0.59
SYMPK-213ENST00000599460 A0A096LPF7 62 aa11.35□□□□□ -0.59
SYMPK-213ENST00000599460 SMIM2Q9BVW6 85 aa11.35□□□□□ -0.59
SYMPK-213ENST00000599460 CSPG4Q6UVK1 2322 aa11.35□□□□□ -0.59
SYMPK-213ENST00000599460 IGF1P05019 195 aa11.35□□□□□ -0.59
SYMPK-213ENST00000599460 IGHV1-24A0A0C4DH33 117 aa11.35□□□□□ -0.59
SYMPK-213ENST00000599460 TMEM243Q9BU79 118 aa11.35□□□□□ -0.59
SYMPK-213ENST00000599460 IGLC2P0DOY2 106 aa11.34□□□□□ -0.59
SYMPK-213ENST00000599460 GAGE6Q13070 117 aa11.34□□□□□ -0.59
SYMPK-213ENST00000599460 EBI3Q14213 229 aa11.34□□□□□ -0.59
SYMPK-213ENST00000599460 ZNF295-AS1Q8N0V1 137 aa11.34□□□□□ -0.59
SYMPK-213ENST00000599460 ZNF479Q96JC4 524 aa11.34□□□□□ -0.59
SYMPK-213ENST00000599460 STPG4Q8N801 248 aa11.34□□□□□ -0.59
SYMPK-213ENST00000599460 DEFB1P60022 68 aa11.34□□□□□ -0.59
SYMPK-213ENST00000599460 KIAA1549Q9HCM3 1950 aa11.34□□□□□ -0.59
SYMPK-213ENST00000599460 INAFM1C9JVW0 142 aa11.34□□□□□ -0.59
SYMPK-213ENST00000599460 TRAV8-2A0A0B4J237 113 aa11.33□□□□□ -0.6
SYMPK-213ENST00000599460 C9orf47Q6ZRZ4 202 aa11.33□□□□□ -0.6
SYMPK-213ENST00000599460 MPV17L2Q567V2 206 aa11.33□□□□□ -0.6
SYMPK-213ENST00000599460 DLX4Q92988 240 aaPredicted RBP11.33□□□□□ -0.6
SYMPK-213ENST00000599460 PAX4O43316 350 aa11.33□□□□□ -0.6
SYMPK-213ENST00000599460 PMVKQ15126 192 aa11.33□□□□□ -0.6
SYMPK-213ENST00000599460 C20orf78Q9BR46 151 aa11.33□□□□□ -0.6
SYMPK-213ENST00000599460 CHAC1Q9BUX1 264 aa11.33□□□□□ -0.6
SYMPK-213ENST00000599460 ATRXP46100 2492 aa11.33□□□□□ -0.6
SYMPK-213ENST00000599460 A0A087X0K7 114 aa11.32□□□□□ -0.6
SYMPK-213ENST00000599460 TRAV25A0A0B4J276 109 aa11.32□□□□□ -0.6
SYMPK-213ENST00000599460 HLA-DRB4P13762 266 aa11.32□□□□□ -0.6
SYMPK-213ENST00000599460 HLA-DRB4X5D2U9 266 aa11.32□□□□□ -0.6
SYMPK-213ENST00000599460 RNF152Q8N8N0 203 aa11.32□□□□□ -0.6
SYMPK-213ENST00000599460 PIFOQ8TCI5 191 aa11.32□□□□□ -0.6
SYMPK-213ENST00000599460 MYMXA0A1B0GTQ4 84 aa11.32□□□□□ -0.6
SYMPK-213ENST00000599460 NPSP0C0P6 89 aa11.31□□□□□ -0.6
SYMPK-213ENST00000599460 OCIAD2Q56VL3 154 aa11.31□□□□□ -0.6
SYMPK-213ENST00000599460 ATG2AQ2TAZ0 1938 aa11.31□□□□□ -0.6
SYMPK-213ENST00000599460 A0A0J9YY99 117 aa11.31□□□□□ -0.6
SYMPK-213ENST00000599460 S100A7L2Q5SY68 101 aa11.31□□□□□ -0.6
SYMPK-213ENST00000599460 PRIMA1Q86XR5 153 aa11.31□□□□□ -0.6
SYMPK-213ENST00000599460 TMEM61Q8N0U2 210 aa11.31□□□□□ -0.6
SYMPK-213ENST00000599460 KLF12Q9Y4X4 402 aa11.31□□□□□ -0.6
SYMPK-213ENST00000599460 RHOHQ15669 191 aa11.31□□□□□ -0.6
SYMPK-213ENST00000599460 PAX2Q02962 417 aa11.3□□□□□ -0.6
SYMPK-213ENST00000599460 ZNF503Q96F45 646 aa11.3□□□□□ -0.6
SYMPK-213ENST00000599460 C16orf74Q96GX8 76 aa11.3□□□□□ -0.6
SYMPK-213ENST00000599460 CST9LQ9H4G1 147 aa11.3□□□□□ -0.6
SYMPK-213ENST00000599460 TLN1Q9Y490 2541 aaKnown RBP11.3□□□□□ -0.6
SYMPK-213ENST00000599460 SLC25A20O43772 301 aa11.3□□□□□ -0.6
SYMPK-213ENST00000599460 ZFAND6Q6FIF0 208 aa11.3□□□□□ -0.6
SYMPK-213ENST00000599460 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.29□□□□□ -0.6
SYMPK-213ENST00000599460 ADAMTSL5Q6ZMM2 481 aa11.29□□□□□ -0.6
SYMPK-213ENST00000599460 Q6ZWC4 215 aa11.29□□□□□ -0.6
SYMPK-213ENST00000599460 MSRB1Q9NZV6 116 aa11.29□□□□□ -0.6
SYMPK-213ENST00000599460 GATA1P15976 413 aaPredicted RBP11.29□□□□□ -0.6
SYMPK-213ENST00000599460 Q8N1Y9 231 aa11.28□□□□□ -0.6
SYMPK-213ENST00000599460 ERG28Q9UKR5 140 aa11.28□□□□□ -0.6
SYMPK-213ENST00000599460 VWC2LB2RUY7 222 aa11.28□□□□□ -0.6
SYMPK-213ENST00000599460 ZNF493Q6ZR52 646 aa11.28□□□□□ -0.6
SYMPK-213ENST00000599460 GTSF1LQ9H1H1 148 aa11.28□□□□□ -0.6
SYMPK-213ENST00000599460 LY6G6DO95868 133 aa11.27□□□□□ -0.6
SYMPK-213ENST00000599460 TRAV8-4A0A0B4J246 113 aa11.27□□□□□ -0.61
SYMPK-213ENST00000599460 ZNF625Q96I27 306 aaPredicted RBP11.27□□□□□ -0.61
SYMPK-213ENST00000599460 Q6ZSV7 163 aa11.27□□□□□ -0.61
SYMPK-213ENST00000599460 SUMO4Q6EEV6 95 aa11.26□□□□□ -0.61
SYMPK-213ENST00000599460 NDUFA11Q86Y39 141 aa11.26□□□□□ -0.61
SYMPK-213ENST00000599460 GTSF1Q8WW33 167 aa11.26□□□□□ -0.61
SYMPK-213ENST00000599460 KIR3DS1Q14943 382 aa11.26□□□□□ -0.61
SYMPK-213ENST00000599460 RNASE13Q5GAN3 156 aaKnown RBP11.26□□□□□ -0.61
SYMPK-213ENST00000599460 NAV2Q8IVL1 2488 aa11.26□□□□□ -0.61
SYMPK-213ENST00000599460 CPAMD8Q8IZJ3 1885 aa11.26□□□□□ -0.61
SYMPK-213ENST00000599460 GAGE2BQ13066 116 aa11.26□□□□□ -0.61
SYMPK-213ENST00000599460 KLF5Q13887 457 aaPredicted RBP11.26□□□□□ -0.61
SYMPK-213ENST00000599460 GAGE2EQ4V326 116 aa11.26□□□□□ -0.61
SYMPK-213ENST00000599460 JPT2Q9H910 190 aa11.26□□□□□ -0.61
SYMPK-213ENST00000599460 GAGE2DQ9UEU5 116 aa11.26□□□□□ -0.61
SYMPK-213ENST00000599460 KRTAP10-9P60411 292 aa11.26□□□□□ -0.61
SYMPK-213ENST00000599460 C10orf99Q6UWK7 81 aa11.26□□□□□ -0.61
SYMPK-213ENST00000599460 RPL39LQ96EH5 51 aaKnown RBP11.26□□□□□ -0.61
SYMPK-213ENST00000599460 A0A0J9YX75 114 aa11.25□□□□□ -0.61
SYMPK-213ENST00000599460 Q8N6K4 173 aa11.25□□□□□ -0.61
SYMPK-213ENST00000599460 NAA38Q9BRA0 125 aaKnown RBP11.25□□□□□ -0.61
SYMPK-213ENST00000599460 MRPL35Q9NZE8 188 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 139.1 ms