RNA–Protein interactions for RNA: ENST00000599342.5

VRK3-216, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-216ENST00000599342 ZNF506Q5JVG8 444 aa6.61□□□□□ -1.35
VRK3-216ENST00000599342 DPPA3Q6W0C5 159 aa6.61□□□□□ -1.35
VRK3-216ENST00000599342 CTXND1A0A1B0GTU2 59 aa6.6□□□□□ -1.35
VRK3-216ENST00000599342 PGPEP1LA6NFU8 196 aa6.6□□□□□ -1.35
VRK3-216ENST00000599342 IGHV3-30P01768 117 aa6.6□□□□□ -1.35
VRK3-216ENST00000599342 IGHV3-33P01772 117 aa6.6□□□□□ -1.35
VRK3-216ENST00000599342 IGHV3-30-3P0DP02 117 aa6.6□□□□□ -1.35
VRK3-216ENST00000599342 IGHV3-30-5P0DP03 117 aa6.6□□□□□ -1.35
VRK3-216ENST00000599342 RNASE3P12724 160 aaKnown RBP6.6□□□□□ -1.35
VRK3-216ENST00000599342 UBE2G2P60604 165 aa6.6□□□□□ -1.35
VRK3-216ENST00000599342 Q5BKY6 102 aa6.6□□□□□ -1.35
VRK3-216ENST00000599342 AKR1C8PQ5T2L2 129 aa6.6□□□□□ -1.35
VRK3-216ENST00000599342 LELP1Q5T871 98 aa6.6□□□□□ -1.35
VRK3-216ENST00000599342 RPL7L1Q6DKI1 246 aaKnown RBP6.6□□□□□ -1.35
VRK3-216ENST00000599342 ATP6V0E2Q8NHE4 81 aa6.6□□□□□ -1.35
VRK3-216ENST00000599342 PTH2Q96A98 100 aa6.6□□□□□ -1.35
VRK3-216ENST00000599342 Q9HAA7 133 aa6.6□□□□□ -1.35
VRK3-216ENST00000599342 ARL2-SNX15V9GYD0 113 aa6.6□□□□□ -1.35
VRK3-216ENST00000599342 IGLV5-52A0A0A0MRZ9 124 aa6.59□□□□□ -1.35
VRK3-216ENST00000599342 TRAV34A0A0B4J273 112 aa6.59□□□□□ -1.35
VRK3-216ENST00000599342 RNF222A6NCQ9 220 aa6.59□□□□□ -1.35
VRK3-216ENST00000599342 FABP5P3A8MUU1 101 aa6.59□□□□□ -1.35
VRK3-216ENST00000599342 A8MWV9 139 aa6.59□□□□□ -1.35
VRK3-216ENST00000599342 IBA57-AS1B1ANH7 110 aa6.59□□□□□ -1.35
VRK3-216ENST00000599342 PEX7O00628 323 aa6.59□□□□□ -1.35
VRK3-216ENST00000599342 GCSHP23434 173 aa6.59□□□□□ -1.35
VRK3-216ENST00000599342 ASIPP42127 132 aa6.59□□□□□ -1.35
VRK3-216ENST00000599342 KRTAP10-1P60331 282 aa6.59□□□□□ -1.35
VRK3-216ENST00000599342 LGALSLQ3ZCW2 172 aaPredicted RBP6.59□□□□□ -1.35
VRK3-216ENST00000599342 FRZBQ92765 325 aa6.59□□□□□ -1.35
VRK3-216ENST00000599342 LINC00479Q96M42 142 aa6.59□□□□□ -1.35
VRK3-216ENST00000599342 NKX6-2Q9C056 277 aaPredicted RBP6.59□□□□□ -1.35
VRK3-216ENST00000599342 GTSF1LQ9H1H1 148 aa6.59□□□□□ -1.35
VRK3-216ENST00000599342 PARLQ9H300 379 aa6.59□□□□□ -1.35
VRK3-216ENST00000599342 IGKV3D-20A0A0C4DH25 116 aa6.58□□□□□ -1.36
VRK3-216ENST00000599342 B4DEV8 164 aa6.58□□□□□ -1.36
VRK3-216ENST00000599342 FGF8P55075 233 aaPredicted RBP6.58□□□□□ -1.36
VRK3-216ENST00000599342 XGP55808 180 aa6.58□□□□□ -1.36
VRK3-216ENST00000599342 ZNF726P1Q15940 193 aa6.58□□□□□ -1.36
VRK3-216ENST00000599342 PIK3CD-AS1Q5SR53 167 aa6.58□□□□□ -1.36
VRK3-216ENST00000599342 ZFP2Q6ZN57 461 aa6.58□□□□□ -1.36
VRK3-216ENST00000599342 Q86TA4 180 aa6.58□□□□□ -1.36
VRK3-216ENST00000599342 OR2T35Q8NGX2 323 aa6.58□□□□□ -1.36
VRK3-216ENST00000599342 NTN5Q8WTR8 489 aaPredicted RBP6.58□□□□□ -1.36
VRK3-216ENST00000599342 HIST1H2BAQ96A08 127 aa6.58□□□□□ -1.36
VRK3-216ENST00000599342 GAGE12JA6NER3 117 aa6.57□□□□□ -1.36
VRK3-216ENST00000599342 FAM74A7A6NL05 159 aa6.57□□□□□ -1.36
VRK3-216ENST00000599342 H3BVH4 76 aa6.57□□□□□ -1.36
VRK3-216ENST00000599342 UBE2G1P62253 170 aa6.57□□□□□ -1.36
VRK3-216ENST00000599342 GAGE1Q13065 139 aa6.57□□□□□ -1.36
VRK3-216ENST00000599342 GAGE4Q13068 117 aa6.57□□□□□ -1.36
VRK3-216ENST00000599342 GAGE5Q13069 117 aa6.57□□□□□ -1.36
VRK3-216ENST00000599342 LAGE3Q14657 143 aa6.57□□□□□ -1.36
VRK3-216ENST00000599342 GAGE13Q4V321 117 aa6.57□□□□□ -1.36
VRK3-216ENST00000599342 Q5VSD8 79 aa6.57□□□□□ -1.36
VRK3-216ENST00000599342 SYT8Q8NBV8 401 aa6.57□□□□□ -1.36
VRK3-216ENST00000599342 IL36BQ9NZH7 164 aa6.57□□□□□ -1.36
VRK3-216ENST00000599342 MAP1LC3B2A6NCE7 125 aa6.56□□□□□ -1.36
VRK3-216ENST00000599342 LRCOL1A6NCL2 159 aa6.56□□□□□ -1.36
VRK3-216ENST00000599342 M0R036 132 aa6.56□□□□□ -1.36
VRK3-216ENST00000599342 RHODO00212 210 aa6.56□□□□□ -1.36
VRK3-216ENST00000599342 FAM162BQ5T6X4 162 aa6.56□□□□□ -1.36
VRK3-216ENST00000599342 Q8N814 137 aa6.56□□□□□ -1.36
VRK3-216ENST00000599342 OR11H4Q8NGC9 324 aa6.56□□□□□ -1.36
VRK3-216ENST00000599342 STOML3Q8TAV4 291 aa6.56□□□□□ -1.36
VRK3-216ENST00000599342 FMC1Q96HJ9 113 aa6.56□□□□□ -1.36
VRK3-216ENST00000599342 TM2D2Q9BX73 214 aa6.56□□□□□ -1.36
VRK3-216ENST00000599342 MAP1LC3BQ9GZQ8 125 aa6.56□□□□□ -1.36
VRK3-216ENST00000599342 ZFP30Q9Y2G7 519 aa6.56□□□□□ -1.36
VRK3-216ENST00000599342 A0A087WWC5 75 aa6.55□□□□□ -1.36
VRK3-216ENST00000599342 TRAV8-3A0A0A6YYJ7 113 aa6.55□□□□□ -1.36
VRK3-216ENST00000599342 ARPC5O15511 151 aa6.55□□□□□ -1.36
VRK3-216ENST00000599342 SH2D1AO60880 128 aa6.55□□□□□ -1.36
VRK3-216ENST00000599342 INAFM2P0DMQ5 153 aa6.55□□□□□ -1.36
VRK3-216ENST00000599342 TOR2AQ5JU69 321 aa6.55□□□□□ -1.36
VRK3-216ENST00000599342 FAM74A4Q5TZK3 123 aa6.55□□□□□ -1.36
VRK3-216ENST00000599342 CST9LP1Q5W188 147 aa6.55□□□□□ -1.36
VRK3-216ENST00000599342 Q6ZSN1 163 aa6.55□□□□□ -1.36
VRK3-216ENST00000599342 ZC2HC1AQ96GY0 325 aa6.55□□□□□ -1.36
VRK3-216ENST00000599342 TCEAL7Q9BRU2 100 aa6.55□□□□□ -1.36
VRK3-216ENST00000599342 TMEM70Q9BUB7 260 aa6.55□□□□□ -1.36
VRK3-216ENST00000599342 PHLDA3Q9Y5J5 127 aa6.55□□□□□ -1.36
VRK3-216ENST00000599342 URGCP-MRPS24S4R325 110 aa6.55□□□□□ -1.36
VRK3-216ENST00000599342 KRBOX1C9JBD0 128 aa6.54□□□□□ -1.36
VRK3-216ENST00000599342 FAM229AH3BQW9 127 aa6.54□□□□□ -1.36
VRK3-216ENST00000599342 ARMS2P0C7Q2 107 aa6.54□□□□□ -1.36
VRK3-216ENST00000599342 LINC00694P0DN24 101 aa6.54□□□□□ -1.36
VRK3-216ENST00000599342 TPT1P13693 172 aaKnown RBP6.54□□□□□ -1.36
VRK3-216ENST00000599342 AKR1C3P42330 323 aa6.54□□□□□ -1.36
VRK3-216ENST00000599342 DNLZQ5SXM8 178 aa6.54□□□□□ -1.36
VRK3-216ENST00000599342 DMRTA1Q5VZB9 504 aa6.54□□□□□ -1.36
VRK3-216ENST00000599342 C14orf178Q8N769 122 aaPredicted RBP6.54□□□□□ -1.36
VRK3-216ENST00000599342 SAMD10Q9BYL1 202 aa6.54□□□□□ -1.36
VRK3-216ENST00000599342 JPT2Q9H910 190 aa6.54□□□□□ -1.36
VRK3-216ENST00000599342 GRIFINA4D1Z8 144 aa6.53□□□□□ -1.36
VRK3-216ENST00000599342 M0R381 172 aa6.53□□□□□ -1.36
VRK3-216ENST00000599342 SMR3BP02814 79 aaPredicted RBP6.53□□□□□ -1.36
VRK3-216ENST00000599342 SEC11BP0C7V7 166 aa6.53□□□□□ -1.36
VRK3-216ENST00000599342 FHITP49789 147 aa6.53□□□□□ -1.36
VRK3-216ENST00000599342 CRIP1P50238 77 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms