RNA–Protein interactions for RNA: ENST00000597928.5

USHBP1-207, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 3,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-207ENST00000597928 CHTOPQ9Y3Y2 248 aaKnown RBP9.52□□□□□ -0.89
USHBP1-207ENST00000597928 TRAV21A0A0B4J279 112 aa9.51□□□□□ -0.89
USHBP1-207ENST00000597928 HSD52Q0P140 79 aa9.51□□□□□ -0.89
USHBP1-207ENST00000597928 SIRPDQ9H106 197 aa9.51□□□□□ -0.89
USHBP1-207ENST00000597928 CFAP46Q8IYW2 2715 aa9.51□□□□□ -0.89
USHBP1-207ENST00000597928 ZNF815PA8K554 130 aa9.51□□□□□ -0.89
USHBP1-207ENST00000597928 IGHV4-59P01825 116 aa9.51□□□□□ -0.89
USHBP1-207ENST00000597928 MRPL16Q9NX20 251 aaKnown RBP9.51□□□□□ -0.89
USHBP1-207ENST00000597928 IGHV1-69DA0A0B4J2H0 117 aa9.5□□□□□ -0.89
USHBP1-207ENST00000597928 ODF3BA8MYP8 253 aa9.5□□□□□ -0.89
USHBP1-207ENST00000597928 ATP5LO75964 103 aa9.5□□□□□ -0.89
USHBP1-207ENST00000597928 IGHV1-69P01742 117 aa9.5□□□□□ -0.89
USHBP1-207ENST00000597928 PPBPP02775 128 aa9.5□□□□□ -0.89
USHBP1-207ENST00000597928 PSMB2P49721 201 aa9.5□□□□□ -0.89
USHBP1-207ENST00000597928 RAB9AP51151 201 aa9.5□□□□□ -0.89
USHBP1-207ENST00000597928 LMO4P61968 165 aa9.5□□□□□ -0.89
USHBP1-207ENST00000597928 DPF1Q92782 380 aa9.5□□□□□ -0.89
USHBP1-207ENST00000597928 IGKV3OR2-268A0A0C4DH90 116 aa9.5□□□□□ -0.89
USHBP1-207ENST00000597928 SRSF8Q9BRL6 282 aaKnown RBP9.5□□□□□ -0.89
USHBP1-207ENST00000597928 A0A096LNJ9 63 aa9.5□□□□□ -0.89
USHBP1-207ENST00000597928 ADARB2-AS1A8MUL3 147 aa9.5□□□□□ -0.89
USHBP1-207ENST00000597928 TRBV7-1A0A0A6YYK4 115 aa9.49□□□□□ -0.89
USHBP1-207ENST00000597928 MRPS12O15235 138 aaKnown RBP9.49□□□□□ -0.89
USHBP1-207ENST00000597928 H3BMG7 143 aa9.49□□□□□ -0.89
USHBP1-207ENST00000597928 RPL39P62891 51 aaKnown RBP9.49□□□□□ -0.89
USHBP1-207ENST00000597928 LGALS9BQ3B8N2 356 aa9.49□□□□□ -0.89
USHBP1-207ENST00000597928 LGALS9CQ6DKI2 356 aa9.49□□□□□ -0.89
USHBP1-207ENST00000597928 C2orf66Q6UXQ4 117 aa9.49□□□□□ -0.89
USHBP1-207ENST00000597928 C5orf56Q8N8D9 126 aa9.49□□□□□ -0.89
USHBP1-207ENST00000597928 C2orf91Q6ZV80 131 aa9.49□□□□□ -0.89
USHBP1-207ENST00000597928 OPRPNQ99935 248 aaPredicted RBP9.49□□□□□ -0.89
USHBP1-207ENST00000597928 GTSF1LQ9H1H1 148 aa9.49□□□□□ -0.89
USHBP1-207ENST00000597928 SEC11AP67812 179 aa9.48□□□□□ -0.89
USHBP1-207ENST00000597928 C16orf54Q6UWD8 224 aa9.48□□□□□ -0.89
USHBP1-207ENST00000597928 AJUBAQ96IF1 538 aa9.48□□□□□ -0.89
USHBP1-207ENST00000597928 TRBV25-1A0A075B6N4 114 aa9.48□□□□□ -0.89
USHBP1-207ENST00000597928 IGHV3-16A0A0C4DH30 117 aa9.48□□□□□ -0.89
USHBP1-207ENST00000597928 SLC25A16P16260 332 aa9.48□□□□□ -0.89
USHBP1-207ENST00000597928 SUMO2P61956 95 aaKnown RBP9.48□□□□□ -0.89
USHBP1-207ENST00000597928 ZNF479Q96JC4 524 aa9.48□□□□□ -0.89
USHBP1-207ENST00000597928 KIR2DL4Q99706 377 aa9.48□□□□□ -0.89
USHBP1-207ENST00000597928 A0A1B0GWB2 263 aa9.48□□□□□ -0.89
USHBP1-207ENST00000597928 RNF223E7ERA6 249 aa9.48□□□□□ -0.89
USHBP1-207ENST00000597928 ID1P41134 155 aa9.48□□□□□ -0.89
USHBP1-207ENST00000597928 SMAGPQ0VAQ4 97 aa9.48□□□□□ -0.89
USHBP1-207ENST00000597928 ETDBQ3ZM63 59 aa9.48□□□□□ -0.89
USHBP1-207ENST00000597928 ITLN2Q8WWU7 325 aaPredicted RBP9.48□□□□□ -0.89
USHBP1-207ENST00000597928 RNF185Q96GF1 192 aa9.48□□□□□ -0.89
USHBP1-207ENST00000597928 IGHG4P01861 327 aa9.47□□□□□ -0.89
USHBP1-207ENST00000597928 SH2D6Q7Z4S9 175 aa9.47□□□□□ -0.89
USHBP1-207ENST00000597928 TP53TG1Q9Y2A0 90 aa9.47□□□□□ -0.89
USHBP1-207ENST00000597928 OOSP1A8MZH6 123 aa9.47□□□□□ -0.89
USHBP1-207ENST00000597928 MAPKAPK5-AS1Q8N8E1 139 aa9.47□□□□□ -0.89
USHBP1-207ENST00000597928 ZFAND3Q9H8U3 227 aa9.47□□□□□ -0.89
USHBP1-207ENST00000597928 TRAV8-2A0A0B4J237 113 aa9.47□□□□□ -0.89
USHBP1-207ENST00000597928 Q8N8P6 123 aa9.47□□□□□ -0.89
USHBP1-207ENST00000597928 DUSP14O95147 198 aaKnown RBP9.46□□□□□ -0.89
USHBP1-207ENST00000597928 HLA-DRB4P13762 266 aa9.46□□□□□ -0.89
USHBP1-207ENST00000597928 ODF1Q14990 250 aa9.46□□□□□ -0.89
USHBP1-207ENST00000597928 MRPL52Q86TS9 123 aaKnown RBP9.46□□□□□ -0.89
USHBP1-207ENST00000597928 PHLDA1Q8WV24 401 aaPredicted RBP9.46□□□□□ -0.89
USHBP1-207ENST00000597928 HLA-DRB4X5D2U9 266 aa9.46□□□□□ -0.89
USHBP1-207ENST00000597928 IGHV3-38A0A0C4DH36 116 aa9.46□□□□□ -0.9
USHBP1-207ENST00000597928 C9orf118A6NHY6 69 aa9.46□□□□□ -0.9
USHBP1-207ENST00000597928 C11orf71Q6IPW1 123 aa9.46□□□□□ -0.9
USHBP1-207ENST00000597928 C9orf139Q6ZV77 190 aa9.46□□□□□ -0.9
USHBP1-207ENST00000597928 OR9G4Q8NGQ1 327 aa9.45□□□□□ -0.9
USHBP1-207ENST00000597928 RAX2Q96IS3 184 aa9.45□□□□□ -0.9
USHBP1-207ENST00000597928 DPH3P1Q9H4G8 78 aa9.45□□□□□ -0.9
USHBP1-207ENST00000597928 CLPSL1A2RUU4 121 aa9.45□□□□□ -0.9
USHBP1-207ENST00000597928 IGHV3-53P01767 116 aa9.45□□□□□ -0.9
USHBP1-207ENST00000597928 IGLC6P0CF74 106 aa9.45□□□□□ -0.9
USHBP1-207ENST00000597928 SMIM2Q9BVW6 85 aa9.45□□□□□ -0.9
USHBP1-207ENST00000597928 DEFB112Q30KQ8 113 aa9.45□□□□□ -0.9
USHBP1-207ENST00000597928 TRAV2A0A0B4J234 112 aa9.44□□□□□ -0.9
USHBP1-207ENST00000597928 PRSS29PA6NIE9 313 aa9.44□□□□□ -0.9
USHBP1-207ENST00000597928 MSMBP08118 114 aa9.44□□□□□ -0.9
USHBP1-207ENST00000597928 SNRPD3P62318 126 aaKnown RBP9.44□□□□□ -0.9
USHBP1-207ENST00000597928 ZNF876PQ49A33 203 aa9.44□□□□□ -0.9
USHBP1-207ENST00000597928 DGAT2L7PQ6IED9 249 aa9.44□□□□□ -0.9
USHBP1-207ENST00000597928 DYNLRB2Q8TF09 96 aa9.44□□□□□ -0.9
USHBP1-207ENST00000597928 UBE2E2Q96LR5 201 aa9.44□□□□□ -0.9
USHBP1-207ENST00000597928 ADAMTSL5Q6ZMM2 481 aa9.44□□□□□ -0.9
USHBP1-207ENST00000597928 PRADC1Q9BSG0 188 aa9.44□□□□□ -0.9
USHBP1-207ENST00000597928 DAZ1Q9NQZ3 744 aaKnown RBP9.44□□□□□ -0.9
USHBP1-207ENST00000597928 CELSR2Q9HCU4 2923 aa9.44□□□□□ -0.9
USHBP1-207ENST00000597928 CRXO43186 299 aaPredicted RBP9.44□□□□□ -0.9
USHBP1-207ENST00000597928 C1orf122Q6ZSJ8 110 aa9.44□□□□□ -0.9
USHBP1-207ENST00000597928 PGPEP1Q9NXJ5 209 aa9.44□□□□□ -0.9
USHBP1-207ENST00000597928 FGF6P10767 208 aa9.43□□□□□ -0.9
USHBP1-207ENST00000597928 ZNF493Q6ZR52 646 aa9.43□□□□□ -0.9
USHBP1-207ENST00000597928 IGSF10Q6WRI0 2623 aa9.43□□□□□ -0.9
USHBP1-207ENST00000597928 TEX15Q9BXT5 2789 aa9.43□□□□□ -0.9
USHBP1-207ENST00000597928 A0A1W2PPM0 123 aa9.43□□□□□ -0.9
USHBP1-207ENST00000597928 AVPP01185 164 aa9.43□□□□□ -0.9
USHBP1-207ENST00000597928 BOD1L2Q8IYS8 172 aa9.43□□□□□ -0.9
USHBP1-207ENST00000597928 MDFICQ9P1T7 246 aa9.43□□□□□ -0.9
USHBP1-207ENST00000597928 HECTD1Q9ULT8 2610 aa9.43□□□□□ -0.9
USHBP1-207ENST00000597928 CHD6Q8TD26 2715 aa9.43□□□□□ -0.9
USHBP1-207ENST00000597928 H7C1H1 209 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms