RNA–Protein interactions for RNA: ENST00000594297.1

FOXA3-202, Transcript of forkhead box A3, humanhuman

TSL 3

Gene FOXA3, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-202ENST00000594297 SMIM9A6NGZ8 99 aa11.02□□□□□ -0.65
FOXA3-202ENST00000594297 ATP6V1G1O75348 118 aa11.02□□□□□ -0.65
FOXA3-202ENST00000594297 HTN1P15515 57 aa11.02□□□□□ -0.65
FOXA3-202ENST00000594297 S100A4P26447 101 aaKnown RBP11.02□□□□□ -0.65
FOXA3-202ENST00000594297 KIR3DS1Q14943 382 aa11.02□□□□□ -0.65
FOXA3-202ENST00000594297 LINC01559Q495D7 138 aa11.02□□□□□ -0.65
FOXA3-202ENST00000594297 CT83Q5H943 113 aa11.02□□□□□ -0.65
FOXA3-202ENST00000594297 MUC21Q5SSG8 566 aa11.02□□□□□ -0.65
FOXA3-202ENST00000594297 LINC00467Q9BRT7 94 aa11.02□□□□□ -0.65
FOXA3-202ENST00000594297 GIG44P09565 113 aaPredicted RBP11.01□□□□□ -0.65
FOXA3-202ENST00000594297 TDRG1Q3Y452 100 aa11.01□□□□□ -0.65
FOXA3-202ENST00000594297 RPS10P5Q9NQ39 176 aa11.01□□□□□ -0.65
FOXA3-202ENST00000594297 TMSB15BA0A087X1C1 80 aa11□□□□□ -0.65
FOXA3-202ENST00000594297 TRAV10A0A0B4J240 114 aa11□□□□□ -0.65
FOXA3-202ENST00000594297 IGHV4-28A0A0C4DH34 117 aa11□□□□□ -0.65
FOXA3-202ENST00000594297 C7orf77A4D0Y5 90 aa11□□□□□ -0.65
FOXA3-202ENST00000594297 CXCL1P09341 107 aa11□□□□□ -0.65
FOXA3-202ENST00000594297 RBMY1A1P0DJD3 496 aaKnown RBP11□□□□□ -0.65
FOXA3-202ENST00000594297 RBMY1CP0DJD4 496 aa11□□□□□ -0.65
FOXA3-202ENST00000594297 ASIPP42127 132 aa11□□□□□ -0.65
FOXA3-202ENST00000594297 RPL19P84098 196 aaKnown RBP11□□□□□ -0.65
FOXA3-202ENST00000594297 RBMY1FQ15415 496 aaKnown RBP11□□□□□ -0.65
FOXA3-202ENST00000594297 RRN3P1Q2M238 152 aa11□□□□□ -0.65
FOXA3-202ENST00000594297 ANXA2RQ3ZCQ2 193 aa11□□□□□ -0.65
FOXA3-202ENST00000594297 RNF212Q495C1 297 aa11□□□□□ -0.65
FOXA3-202ENST00000594297 POM121L12Q8N7R1 296 aa11□□□□□ -0.65
FOXA3-202ENST00000594297 CSNK1G2-AS1Q8NCQ2 148 aa11□□□□□ -0.65
FOXA3-202ENST00000594297 A0A087WWC5 75 aa10.99□□□□□ -0.65
FOXA3-202ENST00000594297 A0A1W2PPQ1 181 aa10.99□□□□□ -0.65
FOXA3-202ENST00000594297 S100PP25815 95 aa10.99□□□□□ -0.65
FOXA3-202ENST00000594297 ZNF705AQ6ZN79 300 aaPredicted RBP10.99□□□□□ -0.65
FOXA3-202ENST00000594297 ZNF493Q6ZR52 646 aa10.99□□□□□ -0.65
FOXA3-202ENST00000594297 C1orf158Q8N1D5 194 aa10.99□□□□□ -0.65
FOXA3-202ENST00000594297 BORCS7Q96B45 105 aa10.99□□□□□ -0.65
FOXA3-202ENST00000594297 NEU1Q99519 415 aa10.99□□□□□ -0.65
FOXA3-202ENST00000594297 TMEM242Q9NWH2 141 aa10.99□□□□□ -0.65
FOXA3-202ENST00000594297 FAM231BA6NCW3 169 aa10.98□□□□□ -0.65
FOXA3-202ENST00000594297 ZNF415Q09FC8 603 aa10.98□□□□□ -0.65
FOXA3-202ENST00000594297 KCNIP4Q6PIL6 250 aa10.98□□□□□ -0.65
FOXA3-202ENST00000594297 TSKUQ8WUA8 353 aa10.98□□□□□ -0.65
FOXA3-202ENST00000594297 C16orf74Q96GX8 76 aa10.98□□□□□ -0.65
FOXA3-202ENST00000594297 GFRA4Q9GZZ7 299 aa10.98□□□□□ -0.65
FOXA3-202ENST00000594297 IGKV3D-20A0A0C4DH25 116 aa10.97□□□□□ -0.65
FOXA3-202ENST00000594297 SNURFLB1AK76 121 aa10.97□□□□□ -0.65
FOXA3-202ENST00000594297 F2Z2F3 143 aa10.97□□□□□ -0.65
FOXA3-202ENST00000594297 P0DMU3 169 aa10.97□□□□□ -0.65
FOXA3-202ENST00000594297 FAM231AP0DMU4 169 aa10.97□□□□□ -0.65
FOXA3-202ENST00000594297 FAM231CP0DMU5 169 aa10.97□□□□□ -0.65
FOXA3-202ENST00000594297 TMEM263Q8WUH6 116 aaKnown RBP10.97□□□□□ -0.65
FOXA3-202ENST00000594297 IMMP2LQ96T52 175 aa10.97□□□□□ -0.65
FOXA3-202ENST00000594297 C11orf21Q9P2W6 132 aa10.97□□□□□ -0.65
FOXA3-202ENST00000594297 V9GYV3 84 aa10.97□□□□□ -0.65
FOXA3-202ENST00000594297 LRP1BQ9NZR2 4599 aa10.96□□□□□ -0.65
FOXA3-202ENST00000594297 GRIFINA4D1Z8 144 aa10.96□□□□□ -0.65
FOXA3-202ENST00000594297 TYMSP04818 313 aa10.96□□□□□ -0.65
FOXA3-202ENST00000594297 MIFP14174 115 aa10.96□□□□□ -0.65
FOXA3-202ENST00000594297 LGALS9BQ3B8N2 356 aa10.96□□□□□ -0.65
FOXA3-202ENST00000594297 DNLZQ5SXM8 178 aa10.96□□□□□ -0.65
FOXA3-202ENST00000594297 Q6ZQT7 251 aa10.96□□□□□ -0.65
FOXA3-202ENST00000594297 TPPP3Q9BW30 176 aa10.96□□□□□ -0.65
FOXA3-202ENST00000594297 IL36BQ9NZH7 164 aa10.96□□□□□ -0.65
FOXA3-202ENST00000594297 NAT8BQ9UHF3 227 aa10.96□□□□□ -0.65
FOXA3-202ENST00000594297 CELA1Q9UNI1 258 aa10.96□□□□□ -0.65
FOXA3-202ENST00000594297 GNRH2O43555 120 aa10.95□□□□□ -0.66
FOXA3-202ENST00000594297 FER1L6-AS1Q8NA97 138 aa10.95□□□□□ -0.66
FOXA3-202ENST00000594297 BTF3L4Q96K17 158 aa10.95□□□□□ -0.66
FOXA3-202ENST00000594297 SPXQ9BT56 116 aa10.95□□□□□ -0.66
FOXA3-202ENST00000594297 PHLDA3Q9Y5J5 127 aa10.95□□□□□ -0.66
FOXA3-202ENST00000594297 IGLV2-18A0A075B6J9 118 aa10.94□□□□□ -0.66
FOXA3-202ENST00000594297 MAPKAPK5-AS1Q8N8E1 139 aa10.94□□□□□ -0.66
FOXA3-202ENST00000594297 SYT8Q8NBV8 401 aa10.94□□□□□ -0.66
FOXA3-202ENST00000594297 TIMM8BQ9Y5J9 83 aaPredicted RBP10.94□□□□□ -0.66
FOXA3-202ENST00000594297 X6R8D5 127 aa10.94□□□□□ -0.66
FOXA3-202ENST00000594297 APOBP04114 4563 aaKnown RBP10.93□□□□□ -0.66
FOXA3-202ENST00000594297 DEFB131BA0A096LNP1 70 aa10.93□□□□□ -0.66
FOXA3-202ENST00000594297 IGHV3-16A0A0C4DH30 117 aa10.93□□□□□ -0.66
FOXA3-202ENST00000594297 SMIM27A0A1W2PRY6 76 aa10.93□□□□□ -0.66
FOXA3-202ENST00000594297 ARMS2P0C7Q2 107 aa10.93□□□□□ -0.66
FOXA3-202ENST00000594297 CACNG7P62955 275 aa10.93□□□□□ -0.66
FOXA3-202ENST00000594297 SPANXN1Q5VSR9 72 aa10.93□□□□□ -0.66
FOXA3-202ENST00000594297 Q6ZR54 194 aa10.93□□□□□ -0.66
FOXA3-202ENST00000594297 SMCO4Q9NRQ5 59 aa10.93□□□□□ -0.66
FOXA3-202ENST00000594297 TP53TG3Q9ULZ0 132 aa10.93□□□□□ -0.66
FOXA3-202ENST00000594297 TRAV9-1A0A075B6T8 112 aa10.92□□□□□ -0.66
FOXA3-202ENST00000594297 HIGD1CA8MV81 97 aa10.92□□□□□ -0.66
FOXA3-202ENST00000594297 H3BVH4 76 aa10.92□□□□□ -0.66
FOXA3-202ENST00000594297 OR5AL1P0C617 328 aa10.92□□□□□ -0.66
FOXA3-202ENST00000594297 GZMBP10144 247 aa10.92□□□□□ -0.66
FOXA3-202ENST00000594297 FOXA3P55318 350 aaPredicted RBP10.92□□□□□ -0.66
FOXA3-202ENST00000594297 TCL1AP56279 114 aa10.92□□□□□ -0.66
FOXA3-202ENST00000594297 C12orf74Q32Q52 190 aa10.92□□□□□ -0.66
FOXA3-202ENST00000594297 WDR73Q6P4I2 378 aa10.92□□□□□ -0.66
FOXA3-202ENST00000594297 NDUFAF3Q9BU61 184 aa10.92□□□□□ -0.66
FOXA3-202ENST00000594297 GSN-AS1Q9NRJ2 163 aa10.92□□□□□ -0.66
FOXA3-202ENST00000594297 HERC1Q15751 4861 aa10.92□□□□□ -0.66
FOXA3-202ENST00000594297 S100A8P05109 93 aa10.91□□□□□ -0.66
FOXA3-202ENST00000594297 AZU1P20160 251 aa10.91□□□□□ -0.66
FOXA3-202ENST00000594297 RIGQ13278 110 aa10.91□□□□□ -0.66
FOXA3-202ENST00000594297 SMIM15Q7Z3B0 74 aa10.91□□□□□ -0.66
FOXA3-202ENST00000594297 ZFP82Q8N141 532 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms