RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 TDRG1Q3Y452 100 aa11.12□□□□□ -0.63
VRK3-207ENST00000594092 DNLZQ5SXM8 178 aa11.12□□□□□ -0.63
VRK3-207ENST00000594092 ALKBH7Q9BT30 221 aaPredicted RBP11.12□□□□□ -0.63
VRK3-207ENST00000594092 GNRH2O43555 120 aa11.12□□□□□ -0.63
VRK3-207ENST00000594092 AMBPP02760 352 aa11.12□□□□□ -0.63
VRK3-207ENST00000594092 TIMM8BQ9Y5J9 83 aaPredicted RBP11.12□□□□□ -0.63
VRK3-207ENST00000594092 IGHV1OR15-1A0A075B7D0 117 aa11.11□□□□□ -0.63
VRK3-207ENST00000594092 RPL35AP18077 110 aaKnown RBP11.11□□□□□ -0.63
VRK3-207ENST00000594092 NUTF2P61970 127 aaKnown RBP11.11□□□□□ -0.63
VRK3-207ENST00000594092 OXLD1Q5BKU9 147 aa11.11□□□□□ -0.63
VRK3-207ENST00000594092 SPANXN1Q5VSR9 72 aa11.11□□□□□ -0.63
VRK3-207ENST00000594092 OR10AG1Q8NH19 301 aa11.11□□□□□ -0.63
VRK3-207ENST00000594092 TMEM191AQ9H0A3 160 aa11.11□□□□□ -0.63
VRK3-207ENST00000594092 XCL2Q9UBD3 114 aa11.11□□□□□ -0.63
VRK3-207ENST00000594092 IFITM10A6NMD0 228 aa11.1□□□□□ -0.63
VRK3-207ENST00000594092 INSP01308 110 aa11.1□□□□□ -0.63
VRK3-207ENST00000594092 FAM104BQ5XKR9 115 aa11.1□□□□□ -0.63
VRK3-207ENST00000594092 Q8N1Y9 231 aa11.1□□□□□ -0.63
VRK3-207ENST00000594092 TMEM256Q8N2U0 113 aa11.1□□□□□ -0.63
VRK3-207ENST00000594092 MSRB1Q9NZV6 116 aa11.1□□□□□ -0.63
VRK3-207ENST00000594092 TP53TG3Q9ULZ0 132 aa11.1□□□□□ -0.63
VRK3-207ENST00000594092 IGHV4-4A0A075B6R2 117 aa11.09□□□□□ -0.63
VRK3-207ENST00000594092 GIG44P09565 113 aaPredicted RBP11.09□□□□□ -0.63
VRK3-207ENST00000594092 SMIM15Q7Z3B0 74 aa11.09□□□□□ -0.63
VRK3-207ENST00000594092 LURAP1LQ8IV03 231 aa11.09□□□□□ -0.63
VRK3-207ENST00000594092 AMN1Q8IY45 258 aa11.09□□□□□ -0.63
VRK3-207ENST00000594092 C18orf32Q8TCD1 76 aa11.09□□□□□ -0.63
VRK3-207ENST00000594092 PHLDA3Q9Y5J5 127 aa11.09□□□□□ -0.63
VRK3-207ENST00000594092 PKD1L1Q8TDX9 2849 aa11.09□□□□□ -0.63
VRK3-207ENST00000594092 RNASE3P12724 160 aaKnown RBP11.09□□□□□ -0.63
VRK3-207ENST00000594092 FABP4P15090 132 aa11.09□□□□□ -0.63
VRK3-207ENST00000594092 C20orf144Q9BQM9 153 aa11.09□□□□□ -0.63
VRK3-207ENST00000594092 SERF1AO75920 110 aa11.08□□□□□ -0.64
VRK3-207ENST00000594092 DMRTA1Q5VZB9 504 aa11.08□□□□□ -0.64
VRK3-207ENST00000594092 SCRT2Q9NQ03 307 aa11.08□□□□□ -0.64
VRK3-207ENST00000594092 ESDP10768 282 aa11.07□□□□□ -0.64
VRK3-207ENST00000594092 IQCJQ1A5X6 159 aa11.07□□□□□ -0.64
VRK3-207ENST00000594092 MORN3Q6PF18 240 aaPredicted RBP11.07□□□□□ -0.64
VRK3-207ENST00000594092 TMEM18Q96B42 140 aa11.07□□□□□ -0.64
VRK3-207ENST00000594092 HIST1H2BLQ99880 126 aa11.07□□□□□ -0.64
VRK3-207ENST00000594092 IGHV3-16A0A0C4DH30 117 aa11.07□□□□□ -0.64
VRK3-207ENST00000594092 M0R381 172 aa11.07□□□□□ -0.64
VRK3-207ENST00000594092 SPRY2O43597 315 aa11.07□□□□□ -0.64
VRK3-207ENST00000594092 LINC00310P59036 64 aa11.07□□□□□ -0.64
VRK3-207ENST00000594092 S100A12P80511 92 aa11.07□□□□□ -0.64
VRK3-207ENST00000594092 MRPL51Q4U2R6 128 aaKnown RBP11.07□□□□□ -0.64
VRK3-207ENST00000594092 C1orf158Q8N1D5 194 aa11.07□□□□□ -0.64
VRK3-207ENST00000594092 TRGV11A0A075B6L2 103 aa11.06□□□□□ -0.64
VRK3-207ENST00000594092 NUPR1O60356 82 aa11.06□□□□□ -0.64
VRK3-207ENST00000594092 KRTAP10-11P60412 298 aa11.06□□□□□ -0.64
VRK3-207ENST00000594092 EGFEM1PQ0D2K5 195 aa11.06□□□□□ -0.64
VRK3-207ENST00000594092 ORMDL3Q8N138 153 aa11.06□□□□□ -0.64
VRK3-207ENST00000594092 RCHY1Q96PM5 261 aa11.06□□□□□ -0.64
VRK3-207ENST00000594092 LINC01587Q99440 93 aa11.06□□□□□ -0.64
VRK3-207ENST00000594092 LINC00467Q9BRT7 94 aa11.06□□□□□ -0.64
VRK3-207ENST00000594092 MDFICQ9P1T7 246 aa11.06□□□□□ -0.64
VRK3-207ENST00000594092 CBY3A6NI87 242 aa11.05□□□□□ -0.64
VRK3-207ENST00000594092 D6R8Y8 96 aa11.05□□□□□ -0.64
VRK3-207ENST00000594092 HTN1P15515 57 aa11.05□□□□□ -0.64
VRK3-207ENST00000594092 PACRGQ96M98 296 aaPredicted RBP11.05□□□□□ -0.64
VRK3-207ENST00000594092 PRM2P04554 102 aa11.05□□□□□ -0.64
VRK3-207ENST00000594092 RAB4AP20338 218 aa11.05□□□□□ -0.64
VRK3-207ENST00000594092 EVI2AP22794 236 aa11.05□□□□□ -0.64
VRK3-207ENST00000594092 OR10D4PQ8NGN7 298 aa11.05□□□□□ -0.64
VRK3-207ENST00000594092 RNF185Q96GF1 192 aa11.05□□□□□ -0.64
VRK3-207ENST00000594092 C9orf85Q96MD7 179 aa11.05□□□□□ -0.64
VRK3-207ENST00000594092 C1QTNF4Q9BXJ3 329 aa11.05□□□□□ -0.64
VRK3-207ENST00000594092 U3KQK5 164 aa11.05□□□□□ -0.64
VRK3-207ENST00000594092 PPBPP02775 128 aa11.04□□□□□ -0.64
VRK3-207ENST00000594092 CKS2P33552 79 aa11.04□□□□□ -0.64
VRK3-207ENST00000594092 CSNK1G2-AS1Q8NCQ2 148 aa11.04□□□□□ -0.64
VRK3-207ENST00000594092 PRELID3AQ96N28 172 aa11.04□□□□□ -0.64
VRK3-207ENST00000594092 TMEM208Q9BTX3 173 aa11.04□□□□□ -0.64
VRK3-207ENST00000594092 SAMD10Q9BYL1 202 aa11.04□□□□□ -0.64
VRK3-207ENST00000594092 CSTL1Q9H114 145 aa11.04□□□□□ -0.64
VRK3-207ENST00000594092 NXPH4O95158 308 aa11.03□□□□□ -0.64
VRK3-207ENST00000594092 MUC4Q99102 2169 aa11.03□□□□□ -0.64
VRK3-207ENST00000594092 IGHV3OR16-12A0A075B7B8 117 aa11.02□□□□□ -0.64
VRK3-207ENST00000594092 G3V4G9 280 aa11.02□□□□□ -0.64
VRK3-207ENST00000594092 RNASEKQ6P5S7 137 aaKnown RBP11.02□□□□□ -0.64
VRK3-207ENST00000594092 AP1S3Q96PC3 154 aa11.02□□□□□ -0.64
VRK3-207ENST00000594092 NIT1Q86X76 327 aa11.02□□□□□ -0.65
VRK3-207ENST00000594092 SYT8Q8NBV8 401 aa11.02□□□□□ -0.65
VRK3-207ENST00000594092 DPH3P1Q9H4G8 78 aa11.02□□□□□ -0.65
VRK3-207ENST00000594092 GOLT1BQ9Y3E0 138 aa11.02□□□□□ -0.65
VRK3-207ENST00000594092 SMIM6P0DI80 62 aa11.01□□□□□ -0.65
VRK3-207ENST00000594092 SAMD5Q5TGI4 173 aa11.01□□□□□ -0.65
VRK3-207ENST00000594092 CHCHD1Q96BP2 118 aaKnown RBP11.01□□□□□ -0.65
VRK3-207ENST00000594092 ZMAT5Q9UDW3 170 aaKnown RBP11.01□□□□□ -0.65
VRK3-207ENST00000594092 LAMTOR2Q9Y2Q5 125 aa11.01□□□□□ -0.65
VRK3-207ENST00000594092 DNAH3Q8TD57 4116 aa11.01□□□□□ -0.65
VRK3-207ENST00000594092 SMKR1H3BMG3 65 aa11□□□□□ -0.65
VRK3-207ENST00000594092 HSBP1O75506 76 aa11□□□□□ -0.65
VRK3-207ENST00000594092 NCR2O95944 276 aa11□□□□□ -0.65
VRK3-207ENST00000594092 AZU1P20160 251 aa11□□□□□ -0.65
VRK3-207ENST00000594092 C12orf57Q99622 126 aa11□□□□□ -0.65
VRK3-207ENST00000594092 SMIM17P0DL12 118 aa11□□□□□ -0.65
VRK3-207ENST00000594092 IGHV4-30-4P0DP06 118 aa11□□□□□ -0.65
VRK3-207ENST00000594092 PMCHP20382 165 aa11□□□□□ -0.65
VRK3-207ENST00000594092 AMTP48728 403 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms