RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 SH3BGRL3Q9H299 93 aa8.95□□□□□ -0.98
APOC1-209ENST00000592885 IBA57-AS1B1ANH7 110 aa8.94□□□□□ -0.98
APOC1-209ENST00000592885 RNASE3P12724 160 aaKnown RBP8.94□□□□□ -0.98
APOC1-209ENST00000592885 LELP1Q5T871 98 aa8.94□□□□□ -0.98
APOC1-209ENST00000592885 NTN5Q8WTR8 489 aaPredicted RBP8.94□□□□□ -0.98
APOC1-209ENST00000592885 CTXND1A0A1B0GTU2 59 aa8.93□□□□□ -0.98
APOC1-209ENST00000592885 A0A1B0GVG6 124 aa8.93□□□□□ -0.98
APOC1-209ENST00000592885 PSCAO43653 123 aa8.93□□□□□ -0.98
APOC1-209ENST00000592885 LAGE3Q14657 143 aa8.93□□□□□ -0.98
APOC1-209ENST00000592885 OR10J3Q5JRS4 329 aa8.93□□□□□ -0.98
APOC1-209ENST00000592885 DPPA3Q6W0C5 159 aa8.93□□□□□ -0.98
APOC1-209ENST00000592885 ZFP2Q6ZN57 461 aa8.93□□□□□ -0.98
APOC1-209ENST00000592885 NKX6-2Q9C056 277 aaPredicted RBP8.93□□□□□ -0.98
APOC1-209ENST00000592885 GTSF1LQ9H1H1 148 aa8.93□□□□□ -0.98
APOC1-209ENST00000592885 RNF222A6NCQ9 220 aa8.92□□□□□ -0.98
APOC1-209ENST00000592885 PGPEP1LA6NFU8 196 aa8.92□□□□□ -0.98
APOC1-209ENST00000592885 A8MWV9 139 aa8.92□□□□□ -0.98
APOC1-209ENST00000592885 GCSHP23434 173 aa8.92□□□□□ -0.98
APOC1-209ENST00000592885 XGP55808 180 aa8.92□□□□□ -0.98
APOC1-209ENST00000592885 HIST1H2BAQ96A08 127 aa8.92□□□□□ -0.98
APOC1-209ENST00000592885 ARL2-SNX15V9GYD0 113 aa8.92□□□□□ -0.98
APOC1-209ENST00000592885 FXYD6-FXYD2A0A087WZ82 144 aa8.91□□□□□ -0.98
APOC1-209ENST00000592885 FABP5P3A8MUU1 101 aa8.91□□□□□ -0.98
APOC1-209ENST00000592885 S100A4P26447 101 aaKnown RBP8.91□□□□□ -0.98
APOC1-209ENST00000592885 ASIPP42127 132 aa8.91□□□□□ -0.98
APOC1-209ENST00000592885 KRTAP10-1P60331 282 aa8.91□□□□□ -0.98
APOC1-209ENST00000592885 RPL7L1Q6DKI1 246 aaKnown RBP8.91□□□□□ -0.98
APOC1-209ENST00000592885 Q86TA4 180 aa8.91□□□□□ -0.98
APOC1-209ENST00000592885 ATP6V0E2Q8NHE4 81 aa8.91□□□□□ -0.98
APOC1-209ENST00000592885 FRZBQ92765 325 aa8.91□□□□□ -0.98
APOC1-209ENST00000592885 PARLQ9H300 379 aa8.91□□□□□ -0.98
APOC1-209ENST00000592885 IL36BQ9NZH7 164 aa8.91□□□□□ -0.98
APOC1-209ENST00000592885 IGHV3-73A0A0B4J1V6 119 aa8.9□□□□□ -0.98
APOC1-209ENST00000592885 IGKV3D-20A0A0C4DH25 116 aa8.9□□□□□ -0.98
APOC1-209ENST00000592885 LRCOL1A6NCL2 159 aa8.9□□□□□ -0.98
APOC1-209ENST00000592885 PEX7O00628 323 aa8.9□□□□□ -0.98
APOC1-209ENST00000592885 IFNA7P01567 189 aa8.9□□□□□ -0.98
APOC1-209ENST00000592885 LINC00694P0DN24 101 aa8.9□□□□□ -0.98
APOC1-209ENST00000592885 FUSP35637 526 aaKnown RBP eCLIP8.9□□□□□ -0.98
APOC1-209ENST00000592885 ZNF726P1Q15940 193 aa8.9□□□□□ -0.98
APOC1-209ENST00000592885 Q5BKY6 102 aa8.9□□□□□ -0.98
APOC1-209ENST00000592885 DNLZQ5SXM8 178 aa8.9□□□□□ -0.98
APOC1-209ENST00000592885 AKR1C8PQ5T2L2 129 aa8.9□□□□□ -0.98
APOC1-209ENST00000592885 COX8CQ7Z4L0 72 aa8.9□□□□□ -0.98
APOC1-209ENST00000592885 TCEAL7Q9BRU2 100 aa8.9□□□□□ -0.98
APOC1-209ENST00000592885 IGLV5-52A0A0A0MRZ9 124 aa8.89□□□□□ -0.99
APOC1-209ENST00000592885 FAM74A7A6NL05 159 aa8.89□□□□□ -0.99
APOC1-209ENST00000592885 RHODO00212 210 aa8.89□□□□□ -0.99
APOC1-209ENST00000592885 OR2T35Q8NGX2 323 aa8.89□□□□□ -0.99
APOC1-209ENST00000592885 TMEM70Q9BUB7 260 aa8.89□□□□□ -0.99
APOC1-209ENST00000592885 TM2D2Q9BX73 214 aa8.89□□□□□ -0.99
APOC1-209ENST00000592885 ZFP30Q9Y2G7 519 aa8.89□□□□□ -0.99
APOC1-209ENST00000592885 A0A087WWC5 75 aa8.88□□□□□ -0.99
APOC1-209ENST00000592885 TRAV34A0A0B4J273 112 aa8.88□□□□□ -0.99
APOC1-209ENST00000592885 FGF8P55075 233 aaPredicted RBP8.88□□□□□ -0.99
APOC1-209ENST00000592885 LGALSLQ3ZCW2 172 aaPredicted RBP8.88□□□□□ -0.99
APOC1-209ENST00000592885 TOR2AQ5JU69 321 aa8.88□□□□□ -0.99
APOC1-209ENST00000592885 Q5VSD8 79 aa8.88□□□□□ -0.99
APOC1-209ENST00000592885 Q8N814 137 aa8.88□□□□□ -0.99
APOC1-209ENST00000592885 SYT8Q8NBV8 401 aa8.88□□□□□ -0.99
APOC1-209ENST00000592885 FMC1Q96HJ9 113 aa8.88□□□□□ -0.99
APOC1-209ENST00000592885 LINC00479Q96M42 142 aa8.88□□□□□ -0.99
APOC1-209ENST00000592885 Q9HAA7 133 aa8.88□□□□□ -0.99
APOC1-209ENST00000592885 hCG_2014768A0A024R1R8 64 aa8.87□□□□□ -0.99
APOC1-209ENST00000592885 TRBV6-1A0A0K0K1D8 114 aa8.87□□□□□ -0.99
APOC1-209ENST00000592885 B4DEV8 164 aa8.87□□□□□ -0.99
APOC1-209ENST00000592885 IGHV3-30P01768 117 aa8.87□□□□□ -0.99
APOC1-209ENST00000592885 IGHV3-33P01772 117 aa8.87□□□□□ -0.99
APOC1-209ENST00000592885 IGHV3-30-3P0DP02 117 aa8.87□□□□□ -0.99
APOC1-209ENST00000592885 IGHV3-30-5P0DP03 117 aa8.87□□□□□ -0.99
APOC1-209ENST00000592885 UBE2G2P60604 165 aa8.87□□□□□ -0.99
APOC1-209ENST00000592885 UFSP1Q6NVU6 142 aa8.87□□□□□ -0.99
APOC1-209ENST00000592885 TRAV8-3A0A0A6YYJ7 113 aa8.86□□□□□ -0.99
APOC1-209ENST00000592885 MAP1LC3B2A6NCE7 125 aa8.86□□□□□ -0.99
APOC1-209ENST00000592885 KRBOX1C9JBD0 128 aa8.86□□□□□ -0.99
APOC1-209ENST00000592885 H3BVH4 76 aa8.86□□□□□ -0.99
APOC1-209ENST00000592885 C1QBP02746 253 aa8.86□□□□□ -0.99
APOC1-209ENST00000592885 INAFM2P0DMQ5 153 aa8.86□□□□□ -0.99
APOC1-209ENST00000592885 FHITP49789 147 aa8.86□□□□□ -0.99
APOC1-209ENST00000592885 UBE2G1P62253 170 aa8.86□□□□□ -0.99
APOC1-209ENST00000592885 FAM162BQ5T6X4 162 aa8.86□□□□□ -0.99
APOC1-209ENST00000592885 Q6ZSN1 163 aa8.86□□□□□ -0.99
APOC1-209ENST00000592885 OR11H4Q8NGC9 324 aa8.86□□□□□ -0.99
APOC1-209ENST00000592885 ZC2HC1AQ96GY0 325 aa8.86□□□□□ -0.99
APOC1-209ENST00000592885 MAP1LC3BQ9GZQ8 125 aa8.86□□□□□ -0.99
APOC1-209ENST00000592885 GAGE12JA6NER3 117 aa8.85□□□□□ -0.99
APOC1-209ENST00000592885 SH2D1AO60880 128 aa8.85□□□□□ -0.99
APOC1-209ENST00000592885 SEC11BP0C7V7 166 aa8.85□□□□□ -0.99
APOC1-209ENST00000592885 GAGE1Q13065 139 aa8.85□□□□□ -0.99
APOC1-209ENST00000592885 GAGE4Q13068 117 aa8.85□□□□□ -0.99
APOC1-209ENST00000592885 GAGE5Q13069 117 aa8.85□□□□□ -0.99
APOC1-209ENST00000592885 GAGE13Q4V321 117 aa8.85□□□□□ -0.99
APOC1-209ENST00000592885 STOML3Q8TAV4 291 aa8.85□□□□□ -0.99
APOC1-209ENST00000592885 COX11Q9Y6N1 276 aa8.85□□□□□ -0.99
APOC1-209ENST00000592885 G3V3Q6 166 aa8.84□□□□□ -0.99
APOC1-209ENST00000592885 ARMS2P0C7Q2 107 aa8.84□□□□□ -0.99
APOC1-209ENST00000592885 LINC01559Q495D7 138 aa8.84□□□□□ -0.99
APOC1-209ENST00000592885 FAM229AH3BQW9 127 aa8.83□□□□□ -1
APOC1-209ENST00000592885 ARPC5O15511 151 aa8.83□□□□□ -1
APOC1-209ENST00000592885 LTAP01374 205 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms