RNA–Protein interactions for RNA: ENST00000592013.1

TNFRSF11A-204, Transcript of TNF receptor superfamily member 11a, humanhuman

TSL 2

Gene TNFRSF11A, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-204ENST00000592013 EPM2AB3EWF7 344 aa13.35□□□□□ -0.27
TNFRSF11A-204ENST00000592013 ASIPP42127 132 aa13.35□□□□□ -0.27
TNFRSF11A-204ENST00000592013 LELP1Q5T871 98 aa13.35□□□□□ -0.27
TNFRSF11A-204ENST00000592013 NTN5Q8WTR8 489 aaPredicted RBP13.35□□□□□ -0.27
TNFRSF11A-204ENST00000592013 TCEAL7Q9BRU2 100 aa13.35□□□□□ -0.27
TNFRSF11A-204ENST00000592013 IGLV2-11P01706 119 aa13.34□□□□□ -0.27
TNFRSF11A-204ENST00000592013 ZNF80P51504 273 aaPredicted RBP13.34□□□□□ -0.27
TNFRSF11A-204ENST00000592013 SYT8Q8NBV8 401 aa13.34□□□□□ -0.27
TNFRSF11A-204ENST00000592013 ATP6V0E2Q8NHE4 81 aa13.34□□□□□ -0.27
TNFRSF11A-204ENST00000592013 GTSF1LQ9H1H1 148 aa13.34□□□□□ -0.27
TNFRSF11A-204ENST00000592013 TNFRSF18Q9Y5U5 241 aa13.34□□□□□ -0.27
TNFRSF11A-204ENST00000592013 HSPG2P98160 4391 aa13.34□□□□□ -0.27
TNFRSF11A-204ENST00000592013 LRP1BQ9NZR2 4599 aa13.33□□□□□ -0.28
TNFRSF11A-204ENST00000592013 LOC100131303A0A0U1RQF7 123 aa13.33□□□□□ -0.28
TNFRSF11A-204ENST00000592013 IBA57-AS1B1ANH7 110 aa13.33□□□□□ -0.28
TNFRSF11A-204ENST00000592013 FGF8P55075 233 aaPredicted RBP13.33□□□□□ -0.28
TNFRSF11A-204ENST00000592013 LAGE3Q14657 143 aa13.33□□□□□ -0.28
TNFRSF11A-204ENST00000592013 ZNF506Q5JVG8 444 aa13.33□□□□□ -0.28
TNFRSF11A-204ENST00000592013 STOML3Q8TAV4 291 aa13.33□□□□□ -0.28
TNFRSF11A-204ENST00000592013 TM2D2Q9BX73 214 aa13.33□□□□□ -0.28
TNFRSF11A-204ENST00000592013 ZFP30Q9Y2G7 519 aa13.33□□□□□ -0.28
TNFRSF11A-204ENST00000592013 A0A087WWC5 75 aa13.32□□□□□ -0.28
TNFRSF11A-204ENST00000592013 RHODO00212 210 aa13.32□□□□□ -0.28
TNFRSF11A-204ENST00000592013 GCSHP23434 173 aa13.32□□□□□ -0.28
TNFRSF11A-204ENST00000592013 LGALSLQ3ZCW2 172 aaPredicted RBP13.32□□□□□ -0.28
TNFRSF11A-204ENST00000592013 TOR2AQ5JU69 321 aa13.32□□□□□ -0.28
TNFRSF11A-204ENST00000592013 RPL7L1Q6DKI1 246 aaKnown RBP13.32□□□□□ -0.28
TNFRSF11A-204ENST00000592013 OR2T35Q8NGX2 323 aa13.32□□□□□ -0.28
TNFRSF11A-204ENST00000592013 FRZBQ92765 325 aa13.32□□□□□ -0.28
TNFRSF11A-204ENST00000592013 PEX7O00628 323 aa13.31□□□□□ -0.28
TNFRSF11A-204ENST00000592013 SEC11BP0C7V7 166 aa13.31□□□□□ -0.28
TNFRSF11A-204ENST00000592013 IL36BQ9NZH7 164 aa13.31□□□□□ -0.28
TNFRSF11A-204ENST00000592013 C11orf21Q9P2W6 132 aa13.31□□□□□ -0.28
TNFRSF11A-204ENST00000592013 ARL2-SNX15V9GYD0 113 aa13.31□□□□□ -0.28
TNFRSF11A-204ENST00000592013 IGHV3-73A0A0B4J1V6 119 aa13.3□□□□□ -0.28
TNFRSF11A-204ENST00000592013 PGPEP1LA6NFU8 196 aa13.3□□□□□ -0.28
TNFRSF11A-204ENST00000592013 RNASE3P12724 160 aaKnown RBP13.3□□□□□ -0.28
TNFRSF11A-204ENST00000592013 UBE2G1P62253 170 aa13.3□□□□□ -0.28
TNFRSF11A-204ENST00000592013 IGLV5-52A0A0A0MRZ9 124 aa13.29□□□□□ -0.28
TNFRSF11A-204ENST00000592013 RNF222A6NCQ9 220 aa13.29□□□□□ -0.28
TNFRSF11A-204ENST00000592013 B4DEV8 164 aa13.29□□□□□ -0.28
TNFRSF11A-204ENST00000592013 FMC1Q96HJ9 113 aa13.29□□□□□ -0.28
TNFRSF11A-204ENST00000592013 TRAV8-3A0A0A6YYJ7 113 aa13.28□□□□□ -0.28
TNFRSF11A-204ENST00000592013 UBE2G2P60604 165 aa13.28□□□□□ -0.28
TNFRSF11A-204ENST00000592013 FAM162BQ5T6X4 162 aa13.28□□□□□ -0.28
TNFRSF11A-204ENST00000592013 Q86TA4 180 aa13.28□□□□□ -0.28
TNFRSF11A-204ENST00000592013 PARLQ9H300 379 aa13.28□□□□□ -0.28
TNFRSF11A-204ENST00000592013 COX11Q9Y6N1 276 aa13.28□□□□□ -0.28
TNFRSF11A-204ENST00000592013 TRAV34A0A0B4J273 112 aa13.27□□□□□ -0.29
TNFRSF11A-204ENST00000592013 FAM74A7A6NL05 159 aa13.27□□□□□ -0.29
TNFRSF11A-204ENST00000592013 FHITP49789 147 aa13.27□□□□□ -0.29
TNFRSF11A-204ENST00000592013 DPPA3Q6W0C5 159 aa13.27□□□□□ -0.29
TNFRSF11A-204ENST00000592013 OR11H4Q8NGC9 324 aa13.27□□□□□ -0.29
TNFRSF11A-204ENST00000592013 URGCP-MRPS24S4R325 110 aa13.27□□□□□ -0.29
TNFRSF11A-204ENST00000592013 MAP1LC3B2A6NCE7 125 aa13.26□□□□□ -0.29
TNFRSF11A-204ENST00000592013 RGS21Q2M5E4 152 aa13.26□□□□□ -0.29
TNFRSF11A-204ENST00000592013 Q5BKY6 102 aa13.26□□□□□ -0.29
TNFRSF11A-204ENST00000592013 DNLZQ5SXM8 178 aa13.26□□□□□ -0.29
TNFRSF11A-204ENST00000592013 LINC00479Q96M42 142 aa13.26□□□□□ -0.29
TNFRSF11A-204ENST00000592013 TMEM70Q9BUB7 260 aa13.26□□□□□ -0.29
TNFRSF11A-204ENST00000592013 MAP1LC3BQ9GZQ8 125 aa13.26□□□□□ -0.29
TNFRSF11A-204ENST00000592013 Q9HAA7 133 aa13.26□□□□□ -0.29
TNFRSF11A-204ENST00000592013 DNAH5Q8TE73 4624 aa13.26□□□□□ -0.29
TNFRSF11A-204ENST00000592013 IGKV3D-20A0A0C4DH25 116 aa13.25□□□□□ -0.29
TNFRSF11A-204ENST00000592013 IGHV3-30P01768 117 aa13.25□□□□□ -0.29
TNFRSF11A-204ENST00000592013 IGHV3-33P01772 117 aa13.25□□□□□ -0.29
TNFRSF11A-204ENST00000592013 S100A9P06702 114 aaKnown RBP13.25□□□□□ -0.29
TNFRSF11A-204ENST00000592013 IGHV3-30-3P0DP02 117 aa13.25□□□□□ -0.29
TNFRSF11A-204ENST00000592013 IGHV3-30-5P0DP03 117 aa13.25□□□□□ -0.29
TNFRSF11A-204ENST00000592013 COX8CQ7Z4L0 72 aa13.25□□□□□ -0.29
TNFRSF11A-204ENST00000592013 RMI2Q96E14 147 aa13.25□□□□□ -0.29
TNFRSF11A-204ENST00000592013 PHLDA3Q9Y5J5 127 aa13.25□□□□□ -0.29
TNFRSF11A-204ENST00000592013 TRBV6-1A0A0K0K1D8 114 aa13.24□□□□□ -0.29
TNFRSF11A-204ENST00000592013 FAM229AH3BQW9 127 aa13.24□□□□□ -0.29
TNFRSF11A-204ENST00000592013 TPT1P13693 172 aaKnown RBP13.24□□□□□ -0.29
TNFRSF11A-204ENST00000592013 ZNF726P1Q15940 193 aa13.24□□□□□ -0.29
TNFRSF11A-204ENST00000592013 KCNIP4Q6PIL6 250 aa13.24□□□□□ -0.29
TNFRSF11A-204ENST00000592013 GAGE12JA6NER3 117 aa13.23□□□□□ -0.29
TNFRSF11A-204ENST00000592013 H3BVH4 76 aa13.23□□□□□ -0.29
TNFRSF11A-204ENST00000592013 ARPC5O15511 151 aa13.23□□□□□ -0.29
TNFRSF11A-204ENST00000592013 GAGE1Q13065 139 aa13.23□□□□□ -0.29
TNFRSF11A-204ENST00000592013 GAGE4Q13068 117 aa13.23□□□□□ -0.29
TNFRSF11A-204ENST00000592013 GAGE5Q13069 117 aa13.23□□□□□ -0.29
TNFRSF11A-204ENST00000592013 GAGE13Q4V321 117 aa13.23□□□□□ -0.29
TNFRSF11A-204ENST00000592013 CST9LP1Q5W188 147 aa13.23□□□□□ -0.29
TNFRSF11A-204ENST00000592013 Q8N814 137 aa13.23□□□□□ -0.29
TNFRSF11A-204ENST00000592013 APOBP04114 4563 aaKnown RBP13.22□□□□□ -0.29
TNFRSF11A-204ENST00000592013 LRCOL1A6NCL2 159 aa13.22□□□□□ -0.29
TNFRSF11A-204ENST00000592013 UMAD1C9J7I0 102 aa13.22□□□□□ -0.29
TNFRSF11A-204ENST00000592013 KRBOX1C9JBD0 128 aa13.22□□□□□ -0.29
TNFRSF11A-204ENST00000592013 C1QBP02746 253 aa13.22□□□□□ -0.29
TNFRSF11A-204ENST00000592013 ARMS2P0C7Q2 107 aa13.22□□□□□ -0.29
TNFRSF11A-204ENST00000592013 XGP55808 180 aa13.22□□□□□ -0.29
TNFRSF11A-204ENST00000592013 KRTAP10-1P60331 282 aa13.22□□□□□ -0.29
TNFRSF11A-204ENST00000592013 ZFP82Q8N141 532 aa13.22□□□□□ -0.29
TNFRSF11A-204ENST00000592013 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.22□□□□□ -0.29
TNFRSF11A-204ENST00000592013 INAFM2P0DMQ5 153 aa13.21□□□□□ -0.29
TNFRSF11A-204ENST00000592013 AKR1C3P42330 323 aa13.21□□□□□ -0.29
TNFRSF11A-204ENST00000592013 EIF5AP63241 154 aaKnown RBP13.21□□□□□ -0.29
TNFRSF11A-204ENST00000592013 ELOBQ15370 118 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms