RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 NDFIP1Q9BT67 221 aa7.13□□□□□ -1.27
VPS4B-207ENST00000591519 PSG8Q9UQ74 426 aa7.13□□□□□ -1.27
VPS4B-207ENST00000591519 PEX7O00628 323 aa7.12□□□□□ -1.27
VPS4B-207ENST00000591519 SIVA1O15304 175 aa7.12□□□□□ -1.27
VPS4B-207ENST00000591519 FLI1Q01543 452 aaPredicted RBP7.12□□□□□ -1.27
VPS4B-207ENST00000591519 TMEM183BQ1AE95 376 aa7.12□□□□□ -1.27
VPS4B-207ENST00000591519 SLC51BQ86UW2 128 aa7.12□□□□□ -1.27
VPS4B-207ENST00000591519 TMEM183AQ8IXX5 376 aa7.12□□□□□ -1.27
VPS4B-207ENST00000591519 MBD3L1Q8WWY6 194 aa7.12□□□□□ -1.27
VPS4B-207ENST00000591519 PRO0255Q9UI72 69 aa7.12□□□□□ -1.27
VPS4B-207ENST00000591519 LENEPQ9Y5L5 61 aa7.12□□□□□ -1.27
VPS4B-207ENST00000591519 SERTM2A0A1B0GWG4 89 aa7.11□□□□□ -1.27
VPS4B-207ENST00000591519 IGLV2-11P01706 119 aa7.11□□□□□ -1.27
VPS4B-207ENST00000591519 CRYBA4P53673 196 aa7.11□□□□□ -1.27
VPS4B-207ENST00000591519 LINC00315P59091 139 aa7.11□□□□□ -1.27
VPS4B-207ENST00000591519 CCL20P78556 96 aa7.11□□□□□ -1.27
VPS4B-207ENST00000591519 FHL2Q14192 279 aa7.11□□□□□ -1.27
VPS4B-207ENST00000591519 EIF5AL1Q6IS14 154 aaKnown RBP7.11□□□□□ -1.27
VPS4B-207ENST00000591519 LYPD5Q6UWN5 251 aa7.11□□□□□ -1.27
VPS4B-207ENST00000591519 DPPA3Q6W0C5 159 aa7.11□□□□□ -1.27
VPS4B-207ENST00000591519 ARL6IP6Q8N6S5 226 aa7.11□□□□□ -1.27
VPS4B-207ENST00000591519 TMEM75Q8N9X5 138 aa7.11□□□□□ -1.27
VPS4B-207ENST00000591519 SYT8Q8NBV8 401 aa7.11□□□□□ -1.27
VPS4B-207ENST00000591519 SCRT2Q9NQ03 307 aa7.11□□□□□ -1.27
VPS4B-207ENST00000591519 MRPL16Q9NX20 251 aaKnown RBP7.11□□□□□ -1.27
VPS4B-207ENST00000591519 HHLA3Q9XRX5 114 aa7.11□□□□□ -1.27
VPS4B-207ENST00000591519 ICOSQ9Y6W8 199 aa7.11□□□□□ -1.27
VPS4B-207ENST00000591519 DNAH5Q8TE73 4624 aa7.11□□□□□ -1.27
VPS4B-207ENST00000591519 TRAV21A0A0B4J279 112 aa7.1□□□□□ -1.27
VPS4B-207ENST00000591519 GNRH2O43555 120 aa7.1□□□□□ -1.27
VPS4B-207ENST00000591519 GCGP01275 180 aa7.1□□□□□ -1.27
VPS4B-207ENST00000591519 AKR1C3P42330 323 aa7.1□□□□□ -1.27
VPS4B-207ENST00000591519 SULT1A2P50226 295 aa7.1□□□□□ -1.27
VPS4B-207ENST00000591519 PPT1P50897 306 aa7.1□□□□□ -1.27
VPS4B-207ENST00000591519 ZNF80P51504 273 aaPredicted RBP7.1□□□□□ -1.27
VPS4B-207ENST00000591519 Q6AWC8 147 aa7.1□□□□□ -1.27
VPS4B-207ENST00000591519 FAM159AQ6UWV7 190 aa7.1□□□□□ -1.27
VPS4B-207ENST00000591519 NKX6-2Q9C056 277 aaPredicted RBP7.1□□□□□ -1.27
VPS4B-207ENST00000591519 MDFICQ9P1T7 246 aa7.1□□□□□ -1.27
VPS4B-207ENST00000591519 GNG13Q9P2W3 67 aa7.1□□□□□ -1.27
VPS4B-207ENST00000591519 ARL2-SNX15V9GYD0 113 aa7.1□□□□□ -1.27
VPS4B-207ENST00000591519 K7EP13 123 aa7.09□□□□□ -1.27
VPS4B-207ENST00000591519 NXPH4O95158 308 aa7.09□□□□□ -1.27
VPS4B-207ENST00000591519 IGHV3-53P01767 116 aa7.09□□□□□ -1.27
VPS4B-207ENST00000591519 RAB5CP51148 216 aa7.09□□□□□ -1.27
VPS4B-207ENST00000591519 UBE2G1P62253 170 aa7.09□□□□□ -1.27
VPS4B-207ENST00000591519 ZNF415Q09FC8 603 aa7.09□□□□□ -1.27
VPS4B-207ENST00000591519 MRPL23Q16540 153 aaKnown RBP7.09□□□□□ -1.27
VPS4B-207ENST00000591519 SMUG1Q53HV7 270 aa7.09□□□□□ -1.27
VPS4B-207ENST00000591519 ALKAL2Q6UX46 152 aa7.09□□□□□ -1.27
VPS4B-207ENST00000591519 Q86TA4 180 aa7.09□□□□□ -1.27
VPS4B-207ENST00000591519 RASL10AQ92737 203 aa7.09□□□□□ -1.27
VPS4B-207ENST00000591519 APOBP04114 4563 aaKnown RBP7.09□□□□□ -1.27
VPS4B-207ENST00000591519 TRGV11A0A075B6L2 103 aa7.08□□□□□ -1.28
VPS4B-207ENST00000591519 NEGR1Q7Z3B1 354 aa7.08□□□□□ -1.28
VPS4B-207ENST00000591519 NHLRC2Q8NBF2 726 aa7.08□□□□□ -1.28
VPS4B-207ENST00000591519 HIST1H2BAQ96A08 127 aa7.08□□□□□ -1.28
VPS4B-207ENST00000591519 SPXQ9BT56 116 aa7.08□□□□□ -1.28
VPS4B-207ENST00000591519 SDF2L1Q9HCN8 221 aa7.08□□□□□ -1.28
VPS4B-207ENST00000591519 C11orf21Q9P2W6 132 aa7.08□□□□□ -1.28
VPS4B-207ENST00000591519 TRAV9-2A0A087WT02 112 aa7.07□□□□□ -1.28
VPS4B-207ENST00000591519 TEX46H3BTG2 121 aa7.07□□□□□ -1.28
VPS4B-207ENST00000591519 TYMSP04818 313 aa7.07□□□□□ -1.28
VPS4B-207ENST00000591519 TDRG1Q3Y452 100 aa7.07□□□□□ -1.28
VPS4B-207ENST00000591519 SAPCD1Q5SSQ6 148 aa7.07□□□□□ -1.28
VPS4B-207ENST00000591519 NFE4Q86UQ8 179 aa7.07□□□□□ -1.28
VPS4B-207ENST00000591519 FMC1Q96HJ9 113 aa7.07□□□□□ -1.28
VPS4B-207ENST00000591519 TNFRSF18Q9Y5U5 241 aa7.07□□□□□ -1.28
VPS4B-207ENST00000591519 IGHV3-16A0A0C4DH30 117 aa7.06□□□□□ -1.28
VPS4B-207ENST00000591519 FBLL1A6NHQ2 334 aaKnown RBP7.06□□□□□ -1.28
VPS4B-207ENST00000591519 K7EQD1 137 aa7.06□□□□□ -1.28
VPS4B-207ENST00000591519 PFN1P07737 140 aaKnown RBP7.06□□□□□ -1.28
VPS4B-207ENST00000591519 ZC2HC1AQ96GY0 325 aa7.06□□□□□ -1.28
VPS4B-207ENST00000591519 MANBALQ9NQG1 85 aa7.06□□□□□ -1.28
VPS4B-207ENST00000591519 TRAV1-1A0A0B4J248 108 aa7.05□□□□□ -1.28
VPS4B-207ENST00000591519 TRGV4A0A0C4DH28 118 aa7.05□□□□□ -1.28
VPS4B-207ENST00000591519 C9JCJ5 164 aa7.05□□□□□ -1.28
VPS4B-207ENST00000591519 M0R036 132 aa7.05□□□□□ -1.28
VPS4B-207ENST00000591519 ORM1P02763 201 aa7.05□□□□□ -1.28
VPS4B-207ENST00000591519 SFTA3P0C7M3 94 aa7.05□□□□□ -1.28
VPS4B-207ENST00000591519 XGP55808 180 aa7.05□□□□□ -1.28
VPS4B-207ENST00000591519 ERVFC1-1P60608 527 aa7.05□□□□□ -1.28
VPS4B-207ENST00000591519 ZNF479Q96JC4 524 aa7.05□□□□□ -1.28
VPS4B-207ENST00000591519 KCNS1Q96KK3 526 aa7.05□□□□□ -1.28
VPS4B-207ENST00000591519 LY96Q9Y6Y9 160 aa7.05□□□□□ -1.28
VPS4B-207ENST00000591519 A0A087WTM6 91 aa7.04□□□□□ -1.28
VPS4B-207ENST00000591519 TMSB15BA0A087X1C1 80 aa7.04□□□□□ -1.28
VPS4B-207ENST00000591519 FABP5P3A8MUU1 101 aa7.04□□□□□ -1.28
VPS4B-207ENST00000591519 SH2D1AO60880 128 aa7.04□□□□□ -1.28
VPS4B-207ENST00000591519 LTAP01374 205 aa7.04□□□□□ -1.28
VPS4B-207ENST00000591519 IFNA1P01562 189 aa7.04□□□□□ -1.28
VPS4B-207ENST00000591519 DNAH10OSP0CZ25 163 aa7.04□□□□□ -1.28
VPS4B-207ENST00000591519 SRIP30626 198 aa7.04□□□□□ -1.28
VPS4B-207ENST00000591519 CRIP1P50238 77 aa7.04□□□□□ -1.28
VPS4B-207ENST00000591519 TCEAL7Q9BRU2 100 aa7.04□□□□□ -1.28
VPS4B-207ENST00000591519 DERL1Q9BUN8 251 aa7.04□□□□□ -1.28
VPS4B-207ENST00000591519 ZFP30Q9Y2G7 519 aa7.04□□□□□ -1.28
VPS4B-207ENST00000591519 TRAV4A0A0B4J268 109 aa7.03□□□□□ -1.28
VPS4B-207ENST00000591519 IGKV3D-20A0A0C4DH25 116 aa7.03□□□□□ -1.28
VPS4B-207ENST00000591519 GRIFINA4D1Z8 144 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms