RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 PHLDA3Q9Y5J5 127 aa10.84□□□□□ -0.67
ATG4D-211ENST00000589753 TRGV1A0A0A0MS02 117 aa10.83□□□□□ -0.68
ATG4D-211ENST00000589753 A0A1W2PPQ1 181 aa10.83□□□□□ -0.68
ATG4D-211ENST00000589753 SNAI2O43623 268 aa10.83□□□□□ -0.68
ATG4D-211ENST00000589753 OR5AL1P0C617 328 aa10.83□□□□□ -0.68
ATG4D-211ENST00000589753 Q6ZTI0 123 aa10.83□□□□□ -0.68
ATG4D-211ENST00000589753 SVBPQ8N300 66 aa10.83□□□□□ -0.68
ATG4D-211ENST00000589753 CLRN3Q8NCR9 226 aa10.83□□□□□ -0.68
ATG4D-211ENST00000589753 TPPP3Q9BW30 176 aa10.83□□□□□ -0.68
ATG4D-211ENST00000589753 GFRA4Q9GZZ7 299 aa10.83□□□□□ -0.68
ATG4D-211ENST00000589753 PRKDCP78527 4128 aaKnown RBP10.82□□□□□ -0.68
ATG4D-211ENST00000589753 GAGE12BA1L429 117 aa10.82□□□□□ -0.68
ATG4D-211ENST00000589753 FAM231BA6NCW3 169 aa10.82□□□□□ -0.68
ATG4D-211ENST00000589753 GAGE7O76087 117 aa10.82□□□□□ -0.68
ATG4D-211ENST00000589753 GAGE12FP0CL80 117 aa10.82□□□□□ -0.68
ATG4D-211ENST00000589753 GAGE12GP0CL81 117 aa10.82□□□□□ -0.68
ATG4D-211ENST00000589753 GAGE12IP0CL82 117 aa10.82□□□□□ -0.68
ATG4D-211ENST00000589753 DEFB130BP0DP73 79 aa10.82□□□□□ -0.68
ATG4D-211ENST00000589753 DEFB130AP0DP74 79 aa10.82□□□□□ -0.68
ATG4D-211ENST00000589753 LINC00612Q8N6U2 182 aa10.82□□□□□ -0.68
ATG4D-211ENST00000589753 C11orf45Q8TAV5 145 aa10.82□□□□□ -0.68
ATG4D-211ENST00000589753 GTSF1Q8WW33 167 aa10.82□□□□□ -0.68
ATG4D-211ENST00000589753 RASL10AQ92737 203 aa10.82□□□□□ -0.68
ATG4D-211ENST00000589753 PTH2Q96A98 100 aa10.82□□□□□ -0.68
ATG4D-211ENST00000589753 TENM3Q9P273 2699 aa10.81□□□□□ -0.68
ATG4D-211ENST00000589753 F2Z2F3 143 aa10.81□□□□□ -0.68
ATG4D-211ENST00000589753 SNAPINO95295 136 aa10.81□□□□□ -0.68
ATG4D-211ENST00000589753 DAD1P61803 113 aa10.81□□□□□ -0.68
ATG4D-211ENST00000589753 RHEBQ15382 184 aa10.81□□□□□ -0.68
ATG4D-211ENST00000589753 ZNF876PQ49A33 203 aa10.81□□□□□ -0.68
ATG4D-211ENST00000589753 LYZL1Q6UWQ5 148 aa10.81□□□□□ -0.68
ATG4D-211ENST00000589753 ZFP82Q8N141 532 aa10.81□□□□□ -0.68
ATG4D-211ENST00000589753 SYT8Q8NBV8 401 aa10.81□□□□□ -0.68
ATG4D-211ENST00000589753 OR10AG1Q8NH19 301 aa10.81□□□□□ -0.68
ATG4D-211ENST00000589753 MUC21A0A0G2JKD1 596 aa10.8□□□□□ -0.68
ATG4D-211ENST00000589753 MUC21A0A140T8X8 626 aa10.8□□□□□ -0.68
ATG4D-211ENST00000589753 SMIM27A0A1W2PRY6 76 aa10.8□□□□□ -0.68
ATG4D-211ENST00000589753 C7orf77A4D0Y5 90 aa10.8□□□□□ -0.68
ATG4D-211ENST00000589753 HIGD1CA8MV81 97 aa10.8□□□□□ -0.68
ATG4D-211ENST00000589753 M0R381 172 aa10.8□□□□□ -0.68
ATG4D-211ENST00000589753 CTRLP40313 264 aa10.8□□□□□ -0.68
ATG4D-211ENST00000589753 FOXA3P55318 350 aaPredicted RBP10.8□□□□□ -0.68
ATG4D-211ENST00000589753 NANOS2P60321 138 aaKnown RBP10.8□□□□□ -0.68
ATG4D-211ENST00000589753 C12orf74Q32Q52 190 aa10.8□□□□□ -0.68
ATG4D-211ENST00000589753 SPANXN1Q5VSR9 72 aa10.8□□□□□ -0.68
ATG4D-211ENST00000589753 PGLYRP4Q96LB8 373 aa10.8□□□□□ -0.68
ATG4D-211ENST00000589753 NDUFAF3Q9BU61 184 aa10.8□□□□□ -0.68
ATG4D-211ENST00000589753 CTDSP1Q9GZU7 261 aa10.8□□□□□ -0.68
ATG4D-211ENST00000589753 COL7A1Q02388 2944 aa10.8□□□□□ -0.68
ATG4D-211ENST00000589753 DNAH9Q9NYC9 4486 aa10.8□□□□□ -0.68
ATG4D-211ENST00000589753 TRGV2A0A075B6R0 118 aa10.79□□□□□ -0.68
ATG4D-211ENST00000589753 CACNG7P62955 275 aa10.79□□□□□ -0.68
ATG4D-211ENST00000589753 PIK3CD-AS1Q5SR53 167 aa10.79□□□□□ -0.68
ATG4D-211ENST00000589753 DMRTA1Q5VZB9 504 aa10.79□□□□□ -0.68
ATG4D-211ENST00000589753 RPS10P5Q9NQ39 176 aa10.79□□□□□ -0.68
ATG4D-211ENST00000589753 NAT8BQ9UHF3 227 aa10.79□□□□□ -0.68
ATG4D-211ENST00000589753 A0A087WWC5 75 aa10.78□□□□□ -0.68
ATG4D-211ENST00000589753 NXPH4O95158 308 aa10.78□□□□□ -0.68
ATG4D-211ENST00000589753 SSTP61278 116 aa10.78□□□□□ -0.68
ATG4D-211ENST00000589753 BORCS7Q96B45 105 aa10.78□□□□□ -0.68
ATG4D-211ENST00000589753 C18orf15Q96N68 181 aa10.78□□□□□ -0.68
ATG4D-211ENST00000589753 HUWE1Q7Z6Z7 4374 aaKnown RBP10.78□□□□□ -0.68
ATG4D-211ENST00000589753 IGHV4-4A0A075B6R2 117 aa10.77□□□□□ -0.69
ATG4D-211ENST00000589753 WDR73Q6P4I2 378 aa10.77□□□□□ -0.69
ATG4D-211ENST00000589753 Q6ZTC4 211 aa10.77□□□□□ -0.69
ATG4D-211ENST00000589753 NUP35Q8NFH5 326 aa10.77□□□□□ -0.69
ATG4D-211ENST00000589753 CNFNQ9BYD5 112 aa10.77□□□□□ -0.69
ATG4D-211ENST00000589753 TMEM242Q9NWH2 141 aa10.77□□□□□ -0.69
ATG4D-211ENST00000589753 MUC4Q99102 2169 aa10.77□□□□□ -0.69
ATG4D-211ENST00000589753 A8MWV9 139 aa10.76□□□□□ -0.69
ATG4D-211ENST00000589753 NTF3P20783 257 aa10.76□□□□□ -0.69
ATG4D-211ENST00000589753 OR4C5Q8NGB2 326 aa10.76□□□□□ -0.69
ATG4D-211ENST00000589753 TRAV4A0A0B4J268 109 aa10.75□□□□□ -0.69
ATG4D-211ENST00000589753 A0A1B0GUT8 65 aa10.75□□□□□ -0.69
ATG4D-211ENST00000589753 RS1O15537 224 aa10.75□□□□□ -0.69
ATG4D-211ENST00000589753 ATP5G1P05496 136 aa10.75□□□□□ -0.69
ATG4D-211ENST00000589753 FAM3BP58499 235 aaPredicted RBP10.75□□□□□ -0.69
ATG4D-211ENST00000589753 TWIST1Q15672 202 aa10.75□□□□□ -0.69
ATG4D-211ENST00000589753 CFAP126Q5VTH2 177 aa10.75□□□□□ -0.69
ATG4D-211ENST00000589753 IMMP2LQ96T52 175 aa10.75□□□□□ -0.69
ATG4D-211ENST00000589753 JPT2Q9H910 190 aa10.75□□□□□ -0.69
ATG4D-211ENST00000589753 IGHV3-53P01767 116 aa10.74□□□□□ -0.69
ATG4D-211ENST00000589753 HTN3P15516 51 aa10.74□□□□□ -0.69
ATG4D-211ENST00000589753 KCNIP4Q6PIL6 250 aa10.74□□□□□ -0.69
ATG4D-211ENST00000589753 POM121L12Q8N7R1 296 aa10.74□□□□□ -0.69
ATG4D-211ENST00000589753 MSRB1Q9NZV6 116 aa10.74□□□□□ -0.69
ATG4D-211ENST00000589753 TRGC1P0CF51 173 aa10.73□□□□□ -0.69
ATG4D-211ENST00000589753 RIGQ13278 110 aa10.73□□□□□ -0.69
ATG4D-211ENST00000589753 ATRAIDQ6UW56 229 aa10.73□□□□□ -0.69
ATG4D-211ENST00000589753 ZNF479Q96JC4 524 aa10.73□□□□□ -0.69
ATG4D-211ENST00000589753 WWC2-AS2Q96NR7 200 aa10.73□□□□□ -0.69
ATG4D-211ENST00000589753 AP1S3Q96PC3 154 aa10.73□□□□□ -0.69
ATG4D-211ENST00000589753 DEFB131BA0A096LNP1 70 aa10.72□□□□□ -0.69
ATG4D-211ENST00000589753 TRAV10A0A0B4J240 114 aa10.72□□□□□ -0.69
ATG4D-211ENST00000589753 CIDEAO60543 219 aa10.72□□□□□ -0.69
ATG4D-211ENST00000589753 S100PP25815 95 aa10.72□□□□□ -0.69
ATG4D-211ENST00000589753 FAM74A4Q5TZK3 123 aa10.72□□□□□ -0.69
ATG4D-211ENST00000589753 C14orf178Q8N769 122 aaPredicted RBP10.72□□□□□ -0.69
ATG4D-211ENST00000589753 SAMD10Q9BYL1 202 aa10.72□□□□□ -0.69
ATG4D-211ENST00000589753 A0A087WWL8 130 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms