RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 LINC00173Q6ZV60 143 aa7.48□□□□□ -1.21
VPS25-202ENST00000589219 DEFB125Q8N687 156 aa7.48□□□□□ -1.21
VPS25-202ENST00000589219 SNHG12Q9BXW3 62 aa7.48□□□□□ -1.21
VPS25-202ENST00000589219 MSRB1Q9NZV6 116 aa7.48□□□□□ -1.21
VPS25-202ENST00000589219 A0A096LNJ9 63 aa7.47□□□□□ -1.21
VPS25-202ENST00000589219 LOC389332A0A1B0GUA5 103 aa7.47□□□□□ -1.21
VPS25-202ENST00000589219 DNAJC9-AS1A6NH13 148 aa7.47□□□□□ -1.21
VPS25-202ENST00000589219 PRSS47A8MTI9 375 aa7.47□□□□□ -1.21
VPS25-202ENST00000589219 SMKR1H3BMG3 65 aa7.47□□□□□ -1.21
VPS25-202ENST00000589219 K7EQG2 157 aa7.47□□□□□ -1.21
VPS25-202ENST00000589219 DUSP14O95147 198 aaKnown RBP7.47□□□□□ -1.21
VPS25-202ENST00000589219 NXPH4O95158 308 aa7.47□□□□□ -1.21
VPS25-202ENST00000589219 TNFRSF6BO95407 300 aa7.47□□□□□ -1.21
VPS25-202ENST00000589219 S100A4P26447 101 aaKnown RBP7.47□□□□□ -1.21
VPS25-202ENST00000589219 HOXD3P31249 432 aaPredicted RBP7.47□□□□□ -1.21
VPS25-202ENST00000589219 SSTP61278 116 aa7.47□□□□□ -1.21
VPS25-202ENST00000589219 C10orf99Q6UWK7 81 aa7.47□□□□□ -1.21
VPS25-202ENST00000589219 ATOH7Q8N100 152 aa7.47□□□□□ -1.21
VPS25-202ENST00000589219 MS4A6AQ9H2W1 248 aa7.47□□□□□ -1.21
VPS25-202ENST00000589219 SCRT2Q9NQ03 307 aa7.47□□□□□ -1.21
VPS25-202ENST00000589219 IGKV3-7A0A075B6H7 116 aa7.46□□□□□ -1.22
VPS25-202ENST00000589219 TRAV2A0A0B4J234 112 aa7.46□□□□□ -1.22
VPS25-202ENST00000589219 F6UB75 175 aa7.46□□□□□ -1.22
VPS25-202ENST00000589219 RNASE1P07998 156 aaKnown RBP7.46□□□□□ -1.22
VPS25-202ENST00000589219 SYNJ2BPP57105 145 aa7.46□□□□□ -1.22
VPS25-202ENST00000589219 LGALS9BQ3B8N2 356 aa7.46□□□□□ -1.22
VPS25-202ENST00000589219 ANXA2RQ3ZCQ2 193 aa7.46□□□□□ -1.22
VPS25-202ENST00000589219 LGALS9CQ6DKI2 356 aa7.46□□□□□ -1.22
VPS25-202ENST00000589219 Q6ZN92 141 aa7.46□□□□□ -1.22
VPS25-202ENST00000589219 Q8N8P6 123 aa7.46□□□□□ -1.22
VPS25-202ENST00000589219 OR2K2Q8NGT1 345 aa7.46□□□□□ -1.22
VPS25-202ENST00000589219 AP1S3Q96PC3 154 aa7.46□□□□□ -1.22
VPS25-202ENST00000589219 DPH3P1Q9H4G8 78 aa7.46□□□□□ -1.22
VPS25-202ENST00000589219 C7orf71A4D174 169 aa7.45□□□□□ -1.22
VPS25-202ENST00000589219 LINC01619G3V211 115 aa7.45□□□□□ -1.22
VPS25-202ENST00000589219 J3KRW8 73 aa7.45□□□□□ -1.22
VPS25-202ENST00000589219 M0R381 172 aa7.45□□□□□ -1.22
VPS25-202ENST00000589219 IGLL1P15814 213 aa7.45□□□□□ -1.22
VPS25-202ENST00000589219 EDN2P20800 178 aa7.45□□□□□ -1.22
VPS25-202ENST00000589219 TSPOP30536 169 aa7.45□□□□□ -1.22
VPS25-202ENST00000589219 RNASE4P34096 147 aaKnown RBP7.45□□□□□ -1.22
VPS25-202ENST00000589219 LCE2AQ5TA79 106 aaPredicted RBP7.45□□□□□ -1.22
VPS25-202ENST00000589219 C4orf3Q8WVX3 66 aa7.45□□□□□ -1.22
VPS25-202ENST00000589219 WFDC12Q8WWY7 111 aa7.45□□□□□ -1.22
VPS25-202ENST00000589219 DPF1Q92782 380 aa7.45□□□□□ -1.22
VPS25-202ENST00000589219 DUX5Q96PT3 197 aa7.45□□□□□ -1.22
VPS25-202ENST00000589219 PEMTQ9UBM1 199 aa7.45□□□□□ -1.22
VPS25-202ENST00000589219 MRPS16Q9Y3D3 137 aaKnown RBP7.45□□□□□ -1.22
VPS25-202ENST00000589219 PHLDA3Q9Y5J5 127 aa7.45□□□□□ -1.22
VPS25-202ENST00000589219 A0A0J9YX75 114 aa7.44□□□□□ -1.22
VPS25-202ENST00000589219 PPP1R17O96001 155 aa7.44□□□□□ -1.22
VPS25-202ENST00000589219 EVI2AP22794 236 aa7.44□□□□□ -1.22
VPS25-202ENST00000589219 FCER1GP30273 86 aa7.44□□□□□ -1.22
VPS25-202ENST00000589219 SMCPP49901 116 aaPredicted RBP7.44□□□□□ -1.22
VPS25-202ENST00000589219 NUTF2P61970 127 aaKnown RBP7.44□□□□□ -1.22
VPS25-202ENST00000589219 PSMG4Q5JS54 123 aa7.44□□□□□ -1.22
VPS25-202ENST00000589219 FAM159AQ6UWV7 190 aa7.44□□□□□ -1.22
VPS25-202ENST00000589219 FOXI2Q6ZQN5 318 aa7.44□□□□□ -1.22
VPS25-202ENST00000589219 WFDC3Q8IUB2 231 aa7.44□□□□□ -1.22
VPS25-202ENST00000589219 NRACQ8N912 160 aa7.44□□□□□ -1.22
VPS25-202ENST00000589219 IFI27L1Q96BM0 104 aa7.44□□□□□ -1.22
VPS25-202ENST00000589219 PMCHL2Q9BQD1 86 aa7.44□□□□□ -1.22
VPS25-202ENST00000589219 TIMM8BQ9Y5J9 83 aaPredicted RBP7.44□□□□□ -1.22
VPS25-202ENST00000589219 PKD1L1Q8TDX9 2849 aa7.44□□□□□ -1.22
VPS25-202ENST00000589219 MGAM2Q2M2H8 2515 aa7.43□□□□□ -1.22
VPS25-202ENST00000589219 IGLV2-18A0A075B6J9 118 aa7.43□□□□□ -1.22
VPS25-202ENST00000589219 A0A1B0GV90 55 aa7.43□□□□□ -1.22
VPS25-202ENST00000589219 K7EMI3 77 aa7.43□□□□□ -1.22
VPS25-202ENST00000589219 ZNF688P0C7X2 276 aa7.43□□□□□ -1.22
VPS25-202ENST00000589219 DEFB1P60022 68 aa7.43□□□□□ -1.22
VPS25-202ENST00000589219 MAJINQ3KP22 176 aa7.43□□□□□ -1.22
VPS25-202ENST00000589219 GOLT1BQ9Y3E0 138 aa7.43□□□□□ -1.22
VPS25-202ENST00000589219 H0Y8G0 127 aa7.42□□□□□ -1.22
VPS25-202ENST00000589219 WIPF1O43516 503 aa7.42□□□□□ -1.22
VPS25-202ENST00000589219 ATP5LO75964 103 aa7.42□□□□□ -1.22
VPS25-202ENST00000589219 RNASE3P12724 160 aaKnown RBP7.42□□□□□ -1.22
VPS25-202ENST00000589219 TFPI2P48307 235 aa7.42□□□□□ -1.22
VPS25-202ENST00000589219 COL5A1-AS1Q5SY13 56 aa7.42□□□□□ -1.22
VPS25-202ENST00000589219 SLC25A34Q6PIV7 304 aa7.42□□□□□ -1.22
VPS25-202ENST00000589219 Q6ZQT7 251 aa7.42□□□□□ -1.22
VPS25-202ENST00000589219 POM121L12Q8N7R1 296 aa7.42□□□□□ -1.22
VPS25-202ENST00000589219 OR1N2Q8NGR9 330 aa7.42□□□□□ -1.22
VPS25-202ENST00000589219 C20orf78Q9BR46 151 aa7.42□□□□□ -1.22
VPS25-202ENST00000589219 SMIM2Q9BVW6 85 aa7.42□□□□□ -1.22
VPS25-202ENST00000589219 hDV102S1A0JD36 115 aa7.41□□□□□ -1.22
VPS25-202ENST00000589219 CDKN1BP46527 198 aa7.41□□□□□ -1.22
VPS25-202ENST00000589219 LAGE3Q14657 143 aa7.41□□□□□ -1.22
VPS25-202ENST00000589219 TCTEX1D4Q5JR98 221 aa7.41□□□□□ -1.22
VPS25-202ENST00000589219 MEGF8Q7Z7M0 2845 aa7.4□□□□□ -1.22
VPS25-202ENST00000589219 TRGV11A0A075B6L2 103 aa7.4□□□□□ -1.22
VPS25-202ENST00000589219 A8MTW9 85 aa7.4□□□□□ -1.22
VPS25-202ENST00000589219 GAS8-AS1O95177 125 aa7.4□□□□□ -1.22
VPS25-202ENST00000589219 MGPP08493 103 aa7.4□□□□□ -1.22
VPS25-202ENST00000589219 SMIM17P0DL12 118 aa7.4□□□□□ -1.22
VPS25-202ENST00000589219 GATA1P15976 413 aaPredicted RBP7.4□□□□□ -1.22
VPS25-202ENST00000589219 SLURP1P55000 103 aa7.4□□□□□ -1.22
VPS25-202ENST00000589219 RPL32P62910 135 aaKnown RBP7.4□□□□□ -1.22
VPS25-202ENST00000589219 KIR3DS1Q14943 382 aa7.4□□□□□ -1.22
VPS25-202ENST00000589219 ORMDL2Q53FV1 153 aa7.4□□□□□ -1.22
VPS25-202ENST00000589219 KHDC1LQ5JSQ8 128 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms