RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 HIST2H2BFQ5QNW6 126 aaPredicted RBP18.96■□□□□ 0.63
SCAMP4-210ENST00000588555 ZNF493Q6ZR52 646 aa18.96■□□□□ 0.63
SCAMP4-210ENST00000588555 HIST1H2BHQ93079 126 aa18.96■□□□□ 0.63
SCAMP4-210ENST00000588555 HIST1H2BNQ99877 126 aa18.96■□□□□ 0.63
SCAMP4-210ENST00000588555 HIST1H2BMQ99879 126 aa18.96■□□□□ 0.63
SCAMP4-210ENST00000588555 MDFICQ9P1T7 246 aa18.96■□□□□ 0.63
SCAMP4-210ENST00000588555 TIMM8BQ9Y5J9 83 aaPredicted RBP18.96■□□□□ 0.63
SCAMP4-210ENST00000588555 KRTAP10-11P60412 298 aa18.96■□□□□ 0.63
SCAMP4-210ENST00000588555 TWIST1Q15672 202 aa18.96■□□□□ 0.63
SCAMP4-210ENST00000588555 SPRY2O43597 315 aa18.95■□□□□ 0.62
SCAMP4-210ENST00000588555 C9orf85Q96MD7 179 aa18.95■□□□□ 0.62
SCAMP4-210ENST00000588555 TRGV11A0A075B6L2 103 aa18.94■□□□□ 0.62
SCAMP4-210ENST00000588555 APCSP02743 223 aa18.94■□□□□ 0.62
SCAMP4-210ENST00000588555 CACNG7P62955 275 aa18.94■□□□□ 0.62
SCAMP4-210ENST00000588555 TMEM256Q8N2U0 113 aa18.94■□□□□ 0.62
SCAMP4-210ENST00000588555 CSNK1G2-AS1Q8NCQ2 148 aa18.94■□□□□ 0.62
SCAMP4-210ENST00000588555 LINC01587Q99440 93 aa18.94■□□□□ 0.62
SCAMP4-210ENST00000588555 MUC4Q99102 2169 aa18.94■□□□□ 0.62
SCAMP4-210ENST00000588555 CBY3A6NI87 242 aa18.93■□□□□ 0.62
SCAMP4-210ENST00000588555 PRM2P04554 102 aa18.93■□□□□ 0.62
SCAMP4-210ENST00000588555 C1QTNF4Q9BXJ3 329 aa18.93■□□□□ 0.62
SCAMP4-210ENST00000588555 SPANXN1Q5VSR9 72 aa18.93■□□□□ 0.62
SCAMP4-210ENST00000588555 PHLDA3Q9Y5J5 127 aa18.93■□□□□ 0.62
SCAMP4-210ENST00000588555 NXPH4O95158 308 aa18.92■□□□□ 0.62
SCAMP4-210ENST00000588555 HTN1P15515 57 aa18.92■□□□□ 0.62
SCAMP4-210ENST00000588555 DNAH3Q8TD57 4116 aa18.92■□□□□ 0.62
SCAMP4-210ENST00000588555 KIAA1644Q3SXP7 199 aa18.91■□□□□ 0.62
SCAMP4-210ENST00000588555 CSTL1Q9H114 145 aa18.91■□□□□ 0.62
SCAMP4-210ENST00000588555 TMEM191AQ9H0A3 160 aa18.91■□□□□ 0.62
SCAMP4-210ENST00000588555 M0R381 172 aa18.9■□□□□ 0.62
SCAMP4-210ENST00000588555 TMEM208Q9BTX3 173 aa18.9■□□□□ 0.62
SCAMP4-210ENST00000588555 G3V4G9 280 aa18.89■□□□□ 0.61
SCAMP4-210ENST00000588555 DMRTA1Q5VZB9 504 aa18.89■□□□□ 0.61
SCAMP4-210ENST00000588555 IGHV3OR16-12A0A075B7B8 117 aa18.88■□□□□ 0.61
SCAMP4-210ENST00000588555 LOC102724200A0A096LPH7 203 aaPredicted RBP18.88■□□□□ 0.61
SCAMP4-210ENST00000588555 SAMD5Q5TGI4 173 aa18.88■□□□□ 0.61
SCAMP4-210ENST00000588555 FAM104BQ5XKR9 115 aa18.88■□□□□ 0.61
SCAMP4-210ENST00000588555 C11orf72Q8NBR9 251 aa18.88■□□□□ 0.61
SCAMP4-210ENST00000588555 NBEAL1Q6ZS30 2694 aa18.88■□□□□ 0.61
SCAMP4-210ENST00000588555 AMN1Q8IY45 258 aa18.87■□□□□ 0.61
SCAMP4-210ENST00000588555 GOLT1BQ9Y3E0 138 aa18.87■□□□□ 0.61
SCAMP4-210ENST00000588555 AZU1P20160 251 aa18.86■□□□□ 0.61
SCAMP4-210ENST00000588555 EVI2AP22794 236 aa18.86■□□□□ 0.61
SCAMP4-210ENST00000588555 ZNF705AQ6ZN79 300 aaPredicted RBP18.86■□□□□ 0.61
SCAMP4-210ENST00000588555 ZMAT5Q9UDW3 170 aaKnown RBP18.86■□□□□ 0.61
SCAMP4-210ENST00000588555 NOTCH1P46531 2555 aa18.86■□□□□ 0.61
SCAMP4-210ENST00000588555 IGHV4-30-4P0DP06 118 aa18.86■□□□□ 0.61
SCAMP4-210ENST00000588555 KIR2DL5BA0A0G2JN68 375 aa18.85■□□□□ 0.61
SCAMP4-210ENST00000588555 KIR2DL5BA0A0G2JPC4 375 aa18.85■□□□□ 0.61
SCAMP4-210ENST00000588555 KIR2DL5AQ8N109 375 aa18.85■□□□□ 0.61
SCAMP4-210ENST00000588555 KIR2DL5BQ8NHK3 375 aa18.85■□□□□ 0.61
SCAMP4-210ENST00000588555 SRIP30626 198 aa18.84■□□□□ 0.61
SCAMP4-210ENST00000588555 ZNF415Q09FC8 603 aa18.84■□□□□ 0.61
SCAMP4-210ENST00000588555 RNF185Q96GF1 192 aa18.84■□□□□ 0.61
SCAMP4-210ENST00000588555 GSN-AS1Q9NRJ2 163 aa18.84■□□□□ 0.61
SCAMP4-210ENST00000588555 ALKBH7Q9BT30 221 aaPredicted RBP18.83■□□□□ 0.61
SCAMP4-210ENST00000588555 RNASE8Q8TDE3 154 aaKnown RBP18.83■□□□□ 0.6
SCAMP4-210ENST00000588555 MGAM2Q2M2H8 2515 aa18.82■□□□□ 0.6
SCAMP4-210ENST00000588555 MRPL51Q4U2R6 128 aaKnown RBP18.82■□□□□ 0.6
SCAMP4-210ENST00000588555 NBEAL2Q6ZNJ1 2754 aa18.82■□□□□ 0.6
SCAMP4-210ENST00000588555 S100A6P06703 90 aa18.81■□□□□ 0.6
SCAMP4-210ENST00000588555 RAB4AP20338 218 aa18.81■□□□□ 0.6
SCAMP4-210ENST00000588555 NDUFA6P56556 154 aa18.81■□□□□ 0.6
SCAMP4-210ENST00000588555 IL17DQ8TAD2 202 aa18.81■□□□□ 0.6
SCAMP4-210ENST00000588555 APOC4P55056 127 aa18.81■□□□□ 0.6
SCAMP4-210ENST00000588555 SMIM15Q7Z3B0 74 aa18.81■□□□□ 0.6
SCAMP4-210ENST00000588555 TMEM263Q8WUH6 116 aaKnown RBP18.81■□□□□ 0.6
SCAMP4-210ENST00000588555 AP1S3Q96PC3 154 aa18.81■□□□□ 0.6
SCAMP4-210ENST00000588555 C5orf52A6NGY3 159 aa18.8■□□□□ 0.6
SCAMP4-210ENST00000588555 ZNF876PQ49A33 203 aa18.8■□□□□ 0.6
SCAMP4-210ENST00000588555 SYT8Q8NBV8 401 aa18.8■□□□□ 0.6
SCAMP4-210ENST00000588555 RCHY1Q96PM5 261 aa18.8■□□□□ 0.6
SCAMP4-210ENST00000588555 SNRPEP62304 92 aaKnown RBP18.79■□□□□ 0.6
SCAMP4-210ENST00000588555 COA6Q5JTJ3 125 aaKnown RBP18.79■□□□□ 0.6
SCAMP4-210ENST00000588555 JPT2Q9H910 190 aa18.79■□□□□ 0.6
SCAMP4-210ENST00000588555 KIF25-AS1Q9Y6Z4 181 aa18.79■□□□□ 0.6
SCAMP4-210ENST00000588555 U3KQK5 164 aa18.79■□□□□ 0.6
SCAMP4-210ENST00000588555 C14orf178Q8N769 122 aaPredicted RBP18.78■□□□□ 0.6
SCAMP4-210ENST00000588555 PTH2Q96A98 100 aa18.78■□□□□ 0.6
SCAMP4-210ENST00000588555 SPXQ9BT56 116 aa18.78■□□□□ 0.6
SCAMP4-210ENST00000588555 M0R2P5 195 aa18.78■□□□□ 0.6
SCAMP4-210ENST00000588555 Q0VG73 95 aa18.78■□□□□ 0.6
SCAMP4-210ENST00000588555 DPH3P1Q9H4G8 78 aa18.78■□□□□ 0.6
SCAMP4-210ENST00000588555 A8MZ25 164 aa18.77■□□□□ 0.6
SCAMP4-210ENST00000588555 RIPPLY3P57055 190 aa18.77■□□□□ 0.6
SCAMP4-210ENST00000588555 C18orf32Q8TCD1 76 aa18.77■□□□□ 0.6
SCAMP4-210ENST00000588555 PLAC8L1A1L4L8 177 aa18.76■□□□□ 0.59
SCAMP4-210ENST00000588555 D6R8Y8 96 aa18.76■□□□□ 0.59
SCAMP4-210ENST00000588555 LINC00315P59091 139 aa18.76■□□□□ 0.59
SCAMP4-210ENST00000588555 OR10J3Q5JRS4 329 aa18.76■□□□□ 0.59
SCAMP4-210ENST00000588555 PIK3CD-AS1Q5SR53 167 aa18.76■□□□□ 0.59
SCAMP4-210ENST00000588555 C16orf74Q96GX8 76 aa18.76■□□□□ 0.59
SCAMP4-210ENST00000588555 RRN3P1Q2M238 152 aa18.75■□□□□ 0.59
SCAMP4-210ENST00000588555 ORMDL3Q8N138 153 aa18.75■□□□□ 0.59
SCAMP4-210ENST00000588555 SMKR1H3BMG3 65 aa18.74■□□□□ 0.59
SCAMP4-210ENST00000588555 X6R8D5 127 aa18.74■□□□□ 0.59
SCAMP4-210ENST00000588555 GAS8-AS1O95177 125 aa18.73■□□□□ 0.59
SCAMP4-210ENST00000588555 CKS2P33552 79 aa18.73■□□□□ 0.59
SCAMP4-210ENST00000588555 DEFB135Q30KP9 77 aa18.73■□□□□ 0.59
SCAMP4-210ENST00000588555 POM121L12Q8N7R1 296 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms