RNA–Protein interactions for RNA: ENST00000588408.5

CNTD1-204, Transcript of cyclin N-terminal domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTD1, Length 2,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTD1-204ENST00000588408 VAMP3Q15836 100 aa10.39□□□□□ -0.75
CNTD1-204ENST00000588408 C18orf65Q6ZTR6 163 aa10.39□□□□□ -0.75
CNTD1-204ENST00000588408 C14orf178Q8N769 122 aaPredicted RBP10.39□□□□□ -0.75
CNTD1-204ENST00000588408 ZNF702PQ9H963 129 aa10.39□□□□□ -0.75
CNTD1-204ENST00000588408 VPREB3Q9UKI3 123 aa10.39□□□□□ -0.75
CNTD1-204ENST00000588408 J3QLI3 93 aa10.39□□□□□ -0.75
CNTD1-204ENST00000588408 K7EMT4 169 aa10.39□□□□□ -0.75
CNTD1-204ENST00000588408 IGKV3-20P01619 116 aa10.39□□□□□ -0.75
CNTD1-204ENST00000588408 ZNF688P0C7X2 276 aa10.39□□□□□ -0.75
CNTD1-204ENST00000588408 RNASE3P12724 160 aaKnown RBP10.39□□□□□ -0.75
CNTD1-204ENST00000588408 S100A4P26447 101 aaKnown RBP10.39□□□□□ -0.75
CNTD1-204ENST00000588408 Q5PR19 223 aa10.39□□□□□ -0.75
CNTD1-204ENST00000588408 ERASQ7Z444 233 aa10.39□□□□□ -0.75
CNTD1-204ENST00000588408 Q8N8P6 123 aa10.39□□□□□ -0.75
CNTD1-204ENST00000588408 MS4A6AQ9H2W1 248 aa10.39□□□□□ -0.75
CNTD1-204ENST00000588408 NXT2Q9NPJ8 142 aaKnown RBP10.39□□□□□ -0.75
CNTD1-204ENST00000588408 ZNF580Q9UK33 172 aa10.39□□□□□ -0.75
CNTD1-204ENST00000588408 NF1P21359 2839 aa10.39□□□□□ -0.75
CNTD1-204ENST00000588408 IGHV4OR15-8A0A075B7B6 117 aa10.38□□□□□ -0.75
CNTD1-204ENST00000588408 A0A087WW49 117 aa10.38□□□□□ -0.75
CNTD1-204ENST00000588408 CD5LO43866 347 aa10.38□□□□□ -0.75
CNTD1-204ENST00000588408 COX8AP10176 69 aa10.38□□□□□ -0.75
CNTD1-204ENST00000588408 Q6YL49 198 aa10.38□□□□□ -0.75
CNTD1-204ENST00000588408 C2orf91Q6ZV80 131 aa10.38□□□□□ -0.75
CNTD1-204ENST00000588408 FGF6P10767 208 aa10.38□□□□□ -0.75
CNTD1-204ENST00000588408 ASIPP42127 132 aa10.38□□□□□ -0.75
CNTD1-204ENST00000588408 APRG1Q8IVJ8 170 aa10.38□□□□□ -0.75
CNTD1-204ENST00000588408 RPL39LQ96EH5 51 aaKnown RBP10.38□□□□□ -0.75
CNTD1-204ENST00000588408 DEFB136Q30KP8 78 aa10.37□□□□□ -0.75
CNTD1-204ENST00000588408 PSMG4Q5JS54 123 aa10.37□□□□□ -0.75
CNTD1-204ENST00000588408 PHLDA3Q9Y5J5 127 aa10.37□□□□□ -0.75
CNTD1-204ENST00000588408 CCDC168Q8NDH2 2452 aa10.37□□□□□ -0.75
CNTD1-204ENST00000588408 DEFB113Q30KQ7 82 aa10.37□□□□□ -0.75
CNTD1-204ENST00000588408 BVES-AS1Q5T3Y7 98 aa10.37□□□□□ -0.75
CNTD1-204ENST00000588408 Q96MF0 132 aa10.37□□□□□ -0.75
CNTD1-204ENST00000588408 TRAV12-2A0A075B6T6 113 aa10.36□□□□□ -0.75
CNTD1-204ENST00000588408 TRAV12-3A0A0B4J271 114 aa10.36□□□□□ -0.75
CNTD1-204ENST00000588408 HIST2H2BCQ6DN03 193 aa10.36□□□□□ -0.75
CNTD1-204ENST00000588408 RASL10AQ92737 203 aa10.36□□□□□ -0.75
CNTD1-204ENST00000588408 JPT2Q9H910 190 aa10.36□□□□□ -0.75
CNTD1-204ENST00000588408 KLLNB2CW77 178 aa10.36□□□□□ -0.75
CNTD1-204ENST00000588408 MGPP08493 103 aa10.36□□□□□ -0.75
CNTD1-204ENST00000588408 DEFB104AQ8WTQ1 72 aa10.36□□□□□ -0.75
CNTD1-204ENST00000588408 SMIM17P0DL12 118 aa10.35□□□□□ -0.75
CNTD1-204ENST00000588408 ODF1Q14990 250 aa10.35□□□□□ -0.75
CNTD1-204ENST00000588408 KRTAP1-3Q8IUG1 177 aa10.35□□□□□ -0.75
CNTD1-204ENST00000588408 PCP2Q8IVA1 136 aa10.35□□□□□ -0.75
CNTD1-204ENST00000588408 PRSS1P07477 247 aa10.34□□□□□ -0.75
CNTD1-204ENST00000588408 HOXD3P31249 432 aaPredicted RBP10.34□□□□□ -0.75
CNTD1-204ENST00000588408 FOXC2Q99958 501 aa10.34□□□□□ -0.75
CNTD1-204ENST00000588408 TTTY13Q9BZ97 58 aa10.34□□□□□ -0.75
CNTD1-204ENST00000588408 FLNAP21333 2647 aaKnown RBP10.34□□□□□ -0.75
CNTD1-204ENST00000588408 LGALS1P09382 135 aaKnown RBP10.34□□□□□ -0.75
CNTD1-204ENST00000588408 ID1P41134 155 aa10.34□□□□□ -0.75
CNTD1-204ENST00000588408 LAGE3Q14657 143 aa10.34□□□□□ -0.75
CNTD1-204ENST00000588408 ADAMTSL5Q6ZMM2 481 aa10.34□□□□□ -0.75
CNTD1-204ENST00000588408 DUX3Q96PT4 197 aa10.34□□□□□ -0.75
CNTD1-204ENST00000588408 CHD6Q8TD26 2715 aa10.34□□□□□ -0.75
CNTD1-204ENST00000588408 IGKV2D-26A0A0A0MRZ7 120 aa10.33□□□□□ -0.76
CNTD1-204ENST00000588408 MYOZ3Q8TDC0 251 aa10.33□□□□□ -0.76
CNTD1-204ENST00000588408 DPF1Q92782 380 aa10.33□□□□□ -0.76
CNTD1-204ENST00000588408 GAGE12BA1L429 117 aa10.33□□□□□ -0.76
CNTD1-204ENST00000588408 TAX1BP3O14907 124 aa10.33□□□□□ -0.76
CNTD1-204ENST00000588408 NMUP48645 174 aa10.33□□□□□ -0.76
CNTD1-204ENST00000588408 SLURP1P55000 103 aa10.33□□□□□ -0.76
CNTD1-204ENST00000588408 NEGR1Q7Z3B1 354 aa10.33□□□□□ -0.76
CNTD1-204ENST00000588408 MRAP2Q96G30 205 aa10.33□□□□□ -0.76
CNTD1-204ENST00000588408 DPH3P1Q9H4G8 78 aa10.33□□□□□ -0.76
CNTD1-204ENST00000588408 K7EQG2 157 aa10.32□□□□□ -0.76
CNTD1-204ENST00000588408 SMIM2Q9BVW6 85 aa10.32□□□□□ -0.76
CNTD1-204ENST00000588408 HHLA3Q9XRX5 114 aa10.32□□□□□ -0.76
CNTD1-204ENST00000588408 TMEM89A2RUT3 159 aa10.32□□□□□ -0.76
CNTD1-204ENST00000588408 C7orf71A4D174 169 aa10.32□□□□□ -0.76
CNTD1-204ENST00000588408 DEFB125Q8N687 156 aa10.32□□□□□ -0.76
CNTD1-204ENST00000588408 CLUHP3Q96NS8 147 aa10.32□□□□□ -0.76
CNTD1-204ENST00000588408 A0A0J9YX75 114 aa10.31□□□□□ -0.76
CNTD1-204ENST00000588408 CD7P09564 240 aa10.31□□□□□ -0.76
CNTD1-204ENST00000588408 SPINK13Q1W4C9 94 aa10.31□□□□□ -0.76
CNTD1-204ENST00000588408 FAM159AQ6UWV7 190 aa10.31□□□□□ -0.76
CNTD1-204ENST00000588408 BOD1L2Q8IYS8 172 aa10.31□□□□□ -0.76
CNTD1-204ENST00000588408 ZMAT4Q9H898 229 aa10.31□□□□□ -0.76
CNTD1-204ENST00000588408 A0A087WWL8 130 aa10.31□□□□□ -0.76
CNTD1-204ENST00000588408 TRBV7-9A0A0J9YWB2 115 aa10.31□□□□□ -0.76
CNTD1-204ENST00000588408 LINC00315P59091 139 aa10.31□□□□□ -0.76
CNTD1-204ENST00000588408 SUMO2P61956 95 aaKnown RBP10.31□□□□□ -0.76
CNTD1-204ENST00000588408 MDFICQ9P1T7 246 aa10.31□□□□□ -0.76
CNTD1-204ENST00000588408 KIF25-AS1Q9Y6Z4 181 aa10.31□□□□□ -0.76
CNTD1-204ENST00000588408 WNK1Q9H4A3 2382 aa10.3□□□□□ -0.76
CNTD1-204ENST00000588408 ACANP16112 2415 aa10.3□□□□□ -0.76
CNTD1-204ENST00000588408 ELANEP08246 267 aa10.3□□□□□ -0.76
CNTD1-204ENST00000588408 OR1N2Q8NGR9 330 aa10.3□□□□□ -0.76
CNTD1-204ENST00000588408 UBE2E2Q96LR5 201 aa10.3□□□□□ -0.76
CNTD1-204ENST00000588408 MRPL35Q9NZE8 188 aaKnown RBP10.3□□□□□ -0.76
CNTD1-204ENST00000588408 SETD2Q9BYW2 2564 aaPredicted RBP10.3□□□□□ -0.76
CNTD1-204ENST00000588408 G3V4G9 280 aa10.3□□□□□ -0.76
CNTD1-204ENST00000588408 MED14OSP0DP75 135 aa10.3□□□□□ -0.76
CNTD1-204ENST00000588408 GTSCR1Q86UQ5 136 aa10.3□□□□□ -0.76
CNTD1-204ENST00000588408 TCTEX1D4Q5JR98 221 aa10.29□□□□□ -0.76
CNTD1-204ENST00000588408 AP1S3Q96PC3 154 aa10.29□□□□□ -0.76
CNTD1-204ENST00000588408 TMEM160Q9NX00 188 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms