RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 CNFNQ9BYD5 112 aa7.47□□□□□ -1.21
APOC1-201ENST00000586638 MSRB1Q9NZV6 116 aa7.47□□□□□ -1.21
APOC1-201ENST00000586638 TP53TG3Q9ULZ0 132 aa7.47□□□□□ -1.21
APOC1-201ENST00000586638 LOC102724200A0A096LPH7 203 aaPredicted RBP7.46□□□□□ -1.22
APOC1-201ENST00000586638 A0A1B0GW15 77 aa7.46□□□□□ -1.22
APOC1-201ENST00000586638 OR5AL1P0C617 328 aa7.46□□□□□ -1.22
APOC1-201ENST00000586638 MED14OSP0DP75 135 aa7.46□□□□□ -1.22
APOC1-201ENST00000586638 RNASE3P12724 160 aaKnown RBP7.46□□□□□ -1.22
APOC1-201ENST00000586638 HOXA5P20719 270 aa7.46□□□□□ -1.22
APOC1-201ENST00000586638 NTF3P20783 257 aa7.46□□□□□ -1.22
APOC1-201ENST00000586638 HIST3H2BBQ8N257 126 aa7.46□□□□□ -1.22
APOC1-201ENST00000586638 C19orf73Q9NVV2 129 aa7.46□□□□□ -1.22
APOC1-201ENST00000586638 MUC4Q99102 2169 aa7.45□□□□□ -1.22
APOC1-201ENST00000586638 IGHV1OR15-1A0A075B7D0 117 aa7.45□□□□□ -1.22
APOC1-201ENST00000586638 INSP01308 110 aa7.45□□□□□ -1.22
APOC1-201ENST00000586638 RPL35AP18077 110 aaKnown RBP7.45□□□□□ -1.22
APOC1-201ENST00000586638 CMC4P56277 68 aaPredicted RBP7.45□□□□□ -1.22
APOC1-201ENST00000586638 LINC00310P59036 64 aa7.45□□□□□ -1.22
APOC1-201ENST00000586638 CACNG7P62955 275 aa7.45□□□□□ -1.22
APOC1-201ENST00000586638 DEFB121Q5J5C9 76 aa7.45□□□□□ -1.22
APOC1-201ENST00000586638 SPANXN1Q5VSR9 72 aa7.45□□□□□ -1.22
APOC1-201ENST00000586638 ZNF493Q6ZR52 646 aa7.45□□□□□ -1.22
APOC1-201ENST00000586638 AMN1Q8IY45 258 aa7.45□□□□□ -1.22
APOC1-201ENST00000586638 KCNS1Q96KK3 526 aa7.45□□□□□ -1.22
APOC1-201ENST00000586638 TENM3Q9P273 2699 aa7.45□□□□□ -1.22
APOC1-201ENST00000586638 IGHV3-16A0A0C4DH30 117 aa7.44□□□□□ -1.22
APOC1-201ENST00000586638 IFITM10A6NMD0 228 aa7.44□□□□□ -1.22
APOC1-201ENST00000586638 M0R381 172 aa7.44□□□□□ -1.22
APOC1-201ENST00000586638 IGLL1P15814 213 aa7.44□□□□□ -1.22
APOC1-201ENST00000586638 AKR1D1P51857 326 aa7.44□□□□□ -1.22
APOC1-201ENST00000586638 TDRG1Q3Y452 100 aa7.44□□□□□ -1.22
APOC1-201ENST00000586638 COA6Q5JTJ3 125 aaKnown RBP7.44□□□□□ -1.22
APOC1-201ENST00000586638 DNLZQ5SXM8 178 aa7.44□□□□□ -1.22
APOC1-201ENST00000586638 Q8N1Y9 231 aa7.44□□□□□ -1.22
APOC1-201ENST00000586638 TMEM256Q8N2U0 113 aa7.44□□□□□ -1.22
APOC1-201ENST00000586638 DEFB125Q8N687 156 aa7.44□□□□□ -1.22
APOC1-201ENST00000586638 WFDC9Q8NEX5 89 aa7.44□□□□□ -1.22
APOC1-201ENST00000586638 C18orf32Q8TCD1 76 aa7.44□□□□□ -1.22
APOC1-201ENST00000586638 CLUHP3Q96NS8 147 aa7.44□□□□□ -1.22
APOC1-201ENST00000586638 ALKBH7Q9BT30 221 aaPredicted RBP7.44□□□□□ -1.22
APOC1-201ENST00000586638 XCL2Q9UBD3 114 aa7.44□□□□□ -1.22
APOC1-201ENST00000586638 TRGV11A0A075B6L2 103 aa7.43□□□□□ -1.22
APOC1-201ENST00000586638 CBY3A6NI87 242 aa7.43□□□□□ -1.22
APOC1-201ENST00000586638 SMKR1H3BMG3 65 aa7.43□□□□□ -1.22
APOC1-201ENST00000586638 SERF1AO75920 110 aa7.43□□□□□ -1.22
APOC1-201ENST00000586638 NCR2O95944 276 aa7.43□□□□□ -1.22
APOC1-201ENST00000586638 INSL3P51460 131 aa7.43□□□□□ -1.22
APOC1-201ENST00000586638 MRPL51Q4U2R6 128 aaKnown RBP7.43□□□□□ -1.22
APOC1-201ENST00000586638 FAM104BQ5XKR9 115 aa7.43□□□□□ -1.22
APOC1-201ENST00000586638 BAGE3Q86Y29 109 aa7.43□□□□□ -1.22
APOC1-201ENST00000586638 RNF185Q96GF1 192 aa7.43□□□□□ -1.22
APOC1-201ENST00000586638 C9orf85Q96MD7 179 aa7.43□□□□□ -1.22
APOC1-201ENST00000586638 RCHY1Q96PM5 261 aa7.43□□□□□ -1.22
APOC1-201ENST00000586638 FAM110AQ9BQ89 295 aa7.43□□□□□ -1.22
APOC1-201ENST00000586638 TMEM191AQ9H0A3 160 aa7.43□□□□□ -1.22
APOC1-201ENST00000586638 SCRT2Q9NQ03 307 aa7.43□□□□□ -1.22
APOC1-201ENST00000586638 MDFICQ9P1T7 246 aa7.43□□□□□ -1.22
APOC1-201ENST00000586638 PHLDA3Q9Y5J5 127 aa7.43□□□□□ -1.22
APOC1-201ENST00000586638 IGHV4-4A0A075B6R2 117 aa7.42□□□□□ -1.22
APOC1-201ENST00000586638 D6R8Y8 96 aa7.42□□□□□ -1.22
APOC1-201ENST00000586638 K7EIL1 84 aa7.42□□□□□ -1.22
APOC1-201ENST00000586638 NUPR1O60356 82 aa7.42□□□□□ -1.22
APOC1-201ENST00000586638 NXPH4O95158 308 aa7.42□□□□□ -1.22
APOC1-201ENST00000586638 AMBPP02760 352 aa7.42□□□□□ -1.22
APOC1-201ENST00000586638 PRM2P04554 102 aa7.42□□□□□ -1.22
APOC1-201ENST00000586638 HTN1P15515 57 aa7.42□□□□□ -1.22
APOC1-201ENST00000586638 EVI2AP22794 236 aa7.42□□□□□ -1.22
APOC1-201ENST00000586638 Q0VG73 95 aa7.42□□□□□ -1.22
APOC1-201ENST00000586638 OR10J3Q5JRS4 329 aa7.42□□□□□ -1.22
APOC1-201ENST00000586638 DMRTA1Q5VZB9 504 aa7.42□□□□□ -1.22
APOC1-201ENST00000586638 GTSCR1Q86UQ5 136 aa7.42□□□□□ -1.22
APOC1-201ENST00000586638 MCRIP2Q9BUT9 160 aaKnown RBP7.42□□□□□ -1.22
APOC1-201ENST00000586638 EPPK1P58107 5090 aaKnown RBP7.42□□□□□ -1.22
APOC1-201ENST00000586638 DNAH3Q8TD57 4116 aa7.42□□□□□ -1.22
APOC1-201ENST00000586638 FABP4P15090 132 aa7.41□□□□□ -1.22
APOC1-201ENST00000586638 S100A2P29034 98 aa7.41□□□□□ -1.22
APOC1-201ENST00000586638 C1orf158Q8N1D5 194 aa7.41□□□□□ -1.22
APOC1-201ENST00000586638 WWC2-AS2Q96NR7 200 aa7.41□□□□□ -1.22
APOC1-201ENST00000586638 LINC01587Q99440 93 aa7.41□□□□□ -1.22
APOC1-201ENST00000586638 IGHV3OR16-12A0A075B7B8 117 aa7.4□□□□□ -1.22
APOC1-201ENST00000586638 GAS8-AS1O95177 125 aa7.4□□□□□ -1.22
APOC1-201ENST00000586638 NPYP01303 97 aa7.4□□□□□ -1.22
APOC1-201ENST00000586638 MGPP08493 103 aa7.4□□□□□ -1.22
APOC1-201ENST00000586638 GIG44P09565 113 aaPredicted RBP7.4□□□□□ -1.22
APOC1-201ENST00000586638 RAB4AP20338 218 aa7.4□□□□□ -1.22
APOC1-201ENST00000586638 ZNF415Q09FC8 603 aa7.4□□□□□ -1.22
APOC1-201ENST00000586638 RNASEKQ6P5S7 137 aaKnown RBP7.4□□□□□ -1.22
APOC1-201ENST00000586638 SMIM15Q7Z3B0 74 aa7.4□□□□□ -1.22
APOC1-201ENST00000586638 PRELID3AQ96N28 172 aa7.4□□□□□ -1.22
APOC1-201ENST00000586638 AP1S3Q96PC3 154 aa7.4□□□□□ -1.22
APOC1-201ENST00000586638 HIST1H2BLQ99880 126 aa7.4□□□□□ -1.22
APOC1-201ENST00000586638 C20orf144Q9BQM9 153 aa7.4□□□□□ -1.22
APOC1-201ENST00000586638 JPT2Q9H910 190 aa7.4□□□□□ -1.22
APOC1-201ENST00000586638 U3KQK5 164 aa7.4□□□□□ -1.22
APOC1-201ENST00000586638 TRAV26-2A0A0B4J265 109 aa7.39□□□□□ -1.23
APOC1-201ENST00000586638 GATA1P15976 413 aaPredicted RBP7.39□□□□□ -1.23
APOC1-201ENST00000586638 PMCHP20382 165 aa7.39□□□□□ -1.23
APOC1-201ENST00000586638 KRTAP10-11P60412 298 aa7.39□□□□□ -1.23
APOC1-201ENST00000586638 NUTF2P61970 127 aaKnown RBP7.39□□□□□ -1.23
APOC1-201ENST00000586638 ORMDL3Q8N138 153 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms