RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 F5H768 121 aa13.52□□□□□ -0.25
DDX39A-204ENST00000586558 ARMS2P0C7Q2 107 aa13.52□□□□□ -0.25
DDX39A-204ENST00000586558 TMEM241Q24JQ0 296 aa13.52□□□□□ -0.25
DDX39A-204ENST00000586558 LINC01551Q86U37 167 aa13.52□□□□□ -0.25
DDX39A-204ENST00000586558 SCRT2Q9NQ03 307 aa13.52□□□□□ -0.25
DDX39A-204ENST00000586558 IGLL5B9A064 214 aa13.51□□□□□ -0.25
DDX39A-204ENST00000586558 FAM231DQ6ZW35 169 aa13.51□□□□□ -0.25
DDX39A-204ENST00000586558 SYT8Q8NBV8 401 aa13.51□□□□□ -0.25
DDX39A-204ENST00000586558 NUDT10Q8NFP7 164 aa13.51□□□□□ -0.25
DDX39A-204ENST00000586558 NUDT11Q96G61 164 aa13.51□□□□□ -0.25
DDX39A-204ENST00000586558 CSMD3Q7Z407 3707 aa13.51□□□□□ -0.25
DDX39A-204ENST00000586558 TENM2Q9NT68 2774 aa13.5□□□□□ -0.25
DDX39A-204ENST00000586558 TRAV4A0A0B4J268 109 aa13.5□□□□□ -0.25
DDX39A-204ENST00000586558 RPP21Q9H633 154 aaKnown RBP13.5□□□□□ -0.25
DDX39A-204ENST00000586558 NAT8Q9UHE5 227 aa13.5□□□□□ -0.25
DDX39A-204ENST00000586558 PHLDA3Q9Y5J5 127 aa13.5□□□□□ -0.25
DDX39A-204ENST00000586558 IGHV4-4A0A075B6R2 117 aa13.49□□□□□ -0.25
DDX39A-204ENST00000586558 OR5AL1P0C617 328 aa13.49□□□□□ -0.25
DDX39A-204ENST00000586558 UQCC3Q6UW78 93 aa13.49□□□□□ -0.25
DDX39A-204ENST00000586558 SSBP4Q9BWG4 385 aaPredicted RBP13.49□□□□□ -0.25
DDX39A-204ENST00000586558 RNASE7Q9H1E1 156 aaKnown RBP13.49□□□□□ -0.25
DDX39A-204ENST00000586558 SNAI2O43623 268 aa13.48□□□□□ -0.25
DDX39A-204ENST00000586558 CIDEAO60543 219 aa13.48□□□□□ -0.25
DDX39A-204ENST00000586558 SFTA3P0C7M3 94 aa13.48□□□□□ -0.25
DDX39A-204ENST00000586558 TMEM88Q6PEY1 159 aa13.48□□□□□ -0.25
DDX39A-204ENST00000586558 ZFP82Q8N141 532 aa13.48□□□□□ -0.25
DDX39A-204ENST00000586558 OR4C5Q8NGB2 326 aa13.48□□□□□ -0.25
DDX39A-204ENST00000586558 A8MWV9 139 aa13.47□□□□□ -0.25
DDX39A-204ENST00000586558 HOXA5P20719 270 aa13.47□□□□□ -0.25
DDX39A-204ENST00000586558 ERVFC1-1P60608 527 aa13.47□□□□□ -0.25
DDX39A-204ENST00000586558 SLAQ13239 276 aa13.47□□□□□ -0.25
DDX39A-204ENST00000586558 A0A1W2PPQ1 181 aa13.46□□□□□ -0.25
DDX39A-204ENST00000586558 H3BNG1 76 aa13.46□□□□□ -0.25
DDX39A-204ENST00000586558 RS1O15537 224 aa13.46□□□□□ -0.25
DDX39A-204ENST00000586558 GATCO43716 136 aaKnown RBP13.46□□□□□ -0.25
DDX39A-204ENST00000586558 NXPH4O95158 308 aa13.46□□□□□ -0.25
DDX39A-204ENST00000586558 IGHV3-53P01767 116 aa13.46□□□□□ -0.25
DDX39A-204ENST00000586558 IGLC6P0CF74 106 aa13.46□□□□□ -0.25
DDX39A-204ENST00000586558 RPL23P62829 140 aaKnown RBP13.46□□□□□ -0.25
DDX39A-204ENST00000586558 CT83Q5H943 113 aa13.46□□□□□ -0.25
DDX39A-204ENST00000586558 POM121L12Q8N7R1 296 aa13.46□□□□□ -0.25
DDX39A-204ENST00000586558 FER1L6-AS1Q8NA97 138 aa13.46□□□□□ -0.25
DDX39A-204ENST00000586558 C15orf53Q8NAA6 179 aa13.46□□□□□ -0.25
DDX39A-204ENST00000586558 ZNF479Q96JC4 524 aa13.46□□□□□ -0.25
DDX39A-204ENST00000586558 OSTCQ9NRP0 149 aa13.46□□□□□ -0.25
DDX39A-204ENST00000586558 APLNQ9ULZ1 77 aa13.46□□□□□ -0.25
DDX39A-204ENST00000586558 LINC00862A6NCI5 91 aa13.45□□□□□ -0.26
DDX39A-204ENST00000586558 F2Z2F3 143 aa13.45□□□□□ -0.26
DDX39A-204ENST00000586558 ADIRFQ15847 76 aa13.45□□□□□ -0.26
DDX39A-204ENST00000586558 CFAP126Q5VTH2 177 aa13.45□□□□□ -0.26
DDX39A-204ENST00000586558 DMRTA1Q5VZB9 504 aa13.45□□□□□ -0.26
DDX39A-204ENST00000586558 C15orf54Q8N8G6 183 aa13.45□□□□□ -0.26
DDX39A-204ENST00000586558 ISOC2Q96AB3 205 aa13.45□□□□□ -0.26
DDX39A-204ENST00000586558 PRO0255Q9UI72 69 aa13.45□□□□□ -0.26
DDX39A-204ENST00000586558 TRGV4A0A0C4DH28 118 aa13.44□□□□□ -0.26
DDX39A-204ENST00000586558 A8MWL6 223 aa13.44□□□□□ -0.26
DDX39A-204ENST00000586558 M0R381 172 aa13.44□□□□□ -0.26
DDX39A-204ENST00000586558 GZMBP10144 247 aa13.44□□□□□ -0.26
DDX39A-204ENST00000586558 FHL2Q14192 279 aa13.44□□□□□ -0.26
DDX39A-204ENST00000586558 OR10AG1Q8NH19 301 aa13.44□□□□□ -0.26
DDX39A-204ENST00000586558 MUC4Q99102 2169 aa13.44□□□□□ -0.26
DDX39A-204ENST00000586558 KMT2CQ8NEZ4 4911 aaKnown RBP13.43□□□□□ -0.26
DDX39A-204ENST00000586558 TRAV26-1A0A087WT03 109 aa13.43□□□□□ -0.26
DDX39A-204ENST00000586558 SPANXN1Q5VSR9 72 aa13.43□□□□□ -0.26
DDX39A-204ENST00000586558 ZFP2Q6ZN57 461 aa13.43□□□□□ -0.26
DDX39A-204ENST00000586558 COMMD7Q86VX2 200 aa13.43□□□□□ -0.26
DDX39A-204ENST00000586558 SFRP2Q96HF1 295 aa13.43□□□□□ -0.26
DDX39A-204ENST00000586558 TPPP3Q9BW30 176 aa13.43□□□□□ -0.26
DDX39A-204ENST00000586558 STARD9Q9P2P6 4700 aa13.42□□□□□ -0.26
DDX39A-204ENST00000586558 RHODO00212 210 aa13.42□□□□□ -0.26
DDX39A-204ENST00000586558 CTRLP40313 264 aa13.42□□□□□ -0.26
DDX39A-204ENST00000586558 HHLA3Q9XRX5 114 aa13.42□□□□□ -0.26
DDX39A-204ENST00000586558 CACNG7P62955 275 aa13.41□□□□□ -0.26
DDX39A-204ENST00000586558 PNRC1Q12796 327 aaPredicted RBP13.41□□□□□ -0.26
DDX39A-204ENST00000586558 WDR73Q6P4I2 378 aa13.41□□□□□ -0.26
DDX39A-204ENST00000586558 DYNC2H1Q8NCM8 4307 aaKnown RBP13.41□□□□□ -0.26
DDX39A-204ENST00000586558 FAM231BA6NCW3 169 aa13.4□□□□□ -0.26
DDX39A-204ENST00000586558 PAX4O43316 350 aa13.4□□□□□ -0.26
DDX39A-204ENST00000586558 GATA1P15976 413 aaPredicted RBP13.4□□□□□ -0.26
DDX39A-204ENST00000586558 CRYBA4P53673 196 aa13.4□□□□□ -0.26
DDX39A-204ENST00000586558 LYZL1Q6UWQ5 148 aa13.4□□□□□ -0.26
DDX39A-204ENST00000586558 VSIG2Q96IQ7 327 aa13.4□□□□□ -0.26
DDX39A-204ENST00000586558 GFRA4Q9GZZ7 299 aa13.4□□□□□ -0.26
DDX39A-204ENST00000586558 A0A0J9YY99 117 aa13.39□□□□□ -0.27
DDX39A-204ENST00000586558 TMEM218A2RU14 115 aa13.39□□□□□ -0.27
DDX39A-204ENST00000586558 OR10G8Q8NGN5 311 aa13.39□□□□□ -0.27
DDX39A-204ENST00000586558 TSKUQ8WUA8 353 aa13.39□□□□□ -0.27
DDX39A-204ENST00000586558 CNFNQ9BYD5 112 aa13.39□□□□□ -0.27
DDX39A-204ENST00000586558 V9GYV3 84 aa13.39□□□□□ -0.27
DDX39A-204ENST00000586558 MUC21A0A0G2JKD1 596 aa13.38□□□□□ -0.27
DDX39A-204ENST00000586558 MUC21A0A140T8X8 626 aa13.38□□□□□ -0.27
DDX39A-204ENST00000586558 TRBV6-4A0A1B0GX49 114 aa13.38□□□□□ -0.27
DDX39A-204ENST00000586558 FOXA3P55318 350 aaPredicted RBP13.38□□□□□ -0.27
DDX39A-204ENST00000586558 UFSP1Q6NVU6 142 aa13.38□□□□□ -0.27
DDX39A-204ENST00000586558 GTSF1Q8WW33 167 aa13.38□□□□□ -0.27
DDX39A-204ENST00000586558 AP1S3Q96PC3 154 aa13.38□□□□□ -0.27
DDX39A-204ENST00000586558 JPT2Q9H910 190 aa13.38□□□□□ -0.27
DDX39A-204ENST00000586558 NUDT3O95989 172 aa13.37□□□□□ -0.27
DDX39A-204ENST00000586558 LGALS9CQ6DKI2 356 aa13.37□□□□□ -0.27
DDX39A-204ENST00000586558 ICOSQ9Y6W8 199 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms