RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 TMEM190Q8WZ59 177 aa7.76□□□□□ -1.17
RFFL-212ENST00000584655 AP5S1Q9NUS5 200 aa7.76□□□□□ -1.17
RFFL-212ENST00000584655 TMEM14CQ9P0S9 112 aa7.76□□□□□ -1.17
RFFL-212ENST00000584655 IGHV3-38A0A0C4DH36 116 aa7.76□□□□□ -1.17
RFFL-212ENST00000584655 LY6G6DO95868 133 aa7.76□□□□□ -1.17
RFFL-212ENST00000584655 IGLC3P0DOY3 106 aa7.76□□□□□ -1.17
RFFL-212ENST00000584655 SNRPD3P62318 126 aaKnown RBP7.76□□□□□ -1.17
RFFL-212ENST00000584655 PF4P02776 101 aa7.76□□□□□ -1.17
RFFL-212ENST00000584655 Q6YL49 198 aa7.76□□□□□ -1.17
RFFL-212ENST00000584655 LY96Q9Y6Y9 160 aa7.76□□□□□ -1.17
RFFL-212ENST00000584655 CCL25O15444 150 aa7.75□□□□□ -1.17
RFFL-212ENST00000584655 P0DMU3 169 aa7.75□□□□□ -1.17
RFFL-212ENST00000584655 FAM231AP0DMU4 169 aa7.75□□□□□ -1.17
RFFL-212ENST00000584655 FAM231CP0DMU5 169 aa7.75□□□□□ -1.17
RFFL-212ENST00000584655 MRPL51Q4U2R6 128 aaKnown RBP7.75□□□□□ -1.17
RFFL-212ENST00000584655 IGHV3-64A0A075B6Q5 118 aa7.75□□□□□ -1.17
RFFL-212ENST00000584655 NDUFA4O00483 81 aa7.75□□□□□ -1.17
RFFL-212ENST00000584655 LINC00614P0C842 121 aa7.75□□□□□ -1.17
RFFL-212ENST00000584655 SMIM17P0DL12 118 aa7.75□□□□□ -1.17
RFFL-212ENST00000584655 AMMECR1LQ6DCA0 310 aa7.75□□□□□ -1.17
RFFL-212ENST00000584655 LINC01587Q99440 93 aa7.75□□□□□ -1.17
RFFL-212ENST00000584655 SRSF8Q9BRL6 282 aaKnown RBP7.75□□□□□ -1.17
RFFL-212ENST00000584655 TMEM70Q9BUB7 260 aa7.75□□□□□ -1.17
RFFL-212ENST00000584655 C19orf71A6NCJ1 209 aa7.75□□□□□ -1.17
RFFL-212ENST00000584655 RPL24P83731 157 aaKnown RBP7.75□□□□□ -1.17
RFFL-212ENST00000584655 GPHB5Q86YW7 130 aa7.75□□□□□ -1.17
RFFL-212ENST00000584655 USMG5Q96IX5 58 aa7.75□□□□□ -1.17
RFFL-212ENST00000584655 C7orf71A4D174 169 aa7.75□□□□□ -1.17
RFFL-212ENST00000584655 PSMB8P28062 276 aa7.75□□□□□ -1.17
RFFL-212ENST00000584655 PROK1P58294 105 aa7.75□□□□□ -1.17
RFFL-212ENST00000584655 KLF12Q9Y4X4 402 aa7.75□□□□□ -1.17
RFFL-212ENST00000584655 TRAV9-1A0A075B6T8 112 aa7.74□□□□□ -1.17
RFFL-212ENST00000584655 C2orf70A6NJV1 201 aa7.74□□□□□ -1.17
RFFL-212ENST00000584655 PRB2P02812 416 aaPredicted RBP7.74□□□□□ -1.17
RFFL-212ENST00000584655 COTL1Q14019 142 aa7.74□□□□□ -1.17
RFFL-212ENST00000584655 C16orf54Q6UWD8 224 aa7.74□□□□□ -1.17
RFFL-212ENST00000584655 TEX43Q6ZNM6 134 aa7.74□□□□□ -1.17
RFFL-212ENST00000584655 PHLDA1Q8WV24 401 aaPredicted RBP7.74□□□□□ -1.17
RFFL-212ENST00000584655 C20orf144Q9BQM9 153 aa7.74□□□□□ -1.17
RFFL-212ENST00000584655 ZNF418Q8TF45 676 aaPredicted RBP7.74□□□□□ -1.17
RFFL-212ENST00000584655 SLC50A1Q9BRV3 221 aa7.74□□□□□ -1.17
RFFL-212ENST00000584655 TMEM191AQ9H0A3 160 aa7.74□□□□□ -1.17
RFFL-212ENST00000584655 CACNG7P62955 275 aa7.74□□□□□ -1.17
RFFL-212ENST00000584655 MAP1LC3CQ9BXW4 147 aa7.74□□□□□ -1.17
RFFL-212ENST00000584655 ID1P41134 155 aa7.73□□□□□ -1.17
RFFL-212ENST00000584655 SLC25A34Q6PIV7 304 aa7.73□□□□□ -1.17
RFFL-212ENST00000584655 SPATA12Q7Z6I5 190 aa7.73□□□□□ -1.17
RFFL-212ENST00000584655 A0A096LNT2 108 aa7.73□□□□□ -1.17
RFFL-212ENST00000584655 GATA3P23771 443 aa7.73□□□□□ -1.17
RFFL-212ENST00000584655 LEPP41159 167 aa7.73□□□□□ -1.17
RFFL-212ENST00000584655 KRTAP1-3Q8IUG1 177 aa7.73□□□□□ -1.17
RFFL-212ENST00000584655 ORMDL3Q8N138 153 aa7.73□□□□□ -1.17
RFFL-212ENST00000584655 TRAV9-2A0A087WT02 112 aa7.72□□□□□ -1.17
RFFL-212ENST00000584655 A0A096LPF7 62 aa7.72□□□□□ -1.17
RFFL-212ENST00000584655 IGHV1-24A0A0C4DH33 117 aa7.72□□□□□ -1.17
RFFL-212ENST00000584655 CCL24O00175 119 aa7.72□□□□□ -1.17
RFFL-212ENST00000584655 SFTA2Q6UW10 78 aa7.72□□□□□ -1.17
RFFL-212ENST00000584655 SPATA3Q8NHX4 192 aa7.72□□□□□ -1.17
RFFL-212ENST00000584655 TMEM160Q9NX00 188 aa7.72□□□□□ -1.17
RFFL-212ENST00000584655 ZNF492Q9P255 531 aa7.72□□□□□ -1.17
RFFL-212ENST00000584655 HTN3P15516 51 aa7.72□□□□□ -1.17
RFFL-212ENST00000584655 ASIPP42127 132 aa7.72□□□□□ -1.17
RFFL-212ENST00000584655 SIGLEC8Q9NYZ4 499 aa7.72□□□□□ -1.17
RFFL-212ENST00000584655 Q9UF83 564 aa7.72□□□□□ -1.17
RFFL-212ENST00000584655 PDE6HQ13956 83 aa7.72□□□□□ -1.17
RFFL-212ENST00000584655 ZNF876PQ49A33 203 aa7.71□□□□□ -1.17
RFFL-212ENST00000584655 C9orf139Q6ZV77 190 aa7.71□□□□□ -1.17
RFFL-212ENST00000584655 LINC00482Q8N8I6 264 aa7.71□□□□□ -1.17
RFFL-212ENST00000584655 LINC01006Q8NI28 216 aa7.71□□□□□ -1.17
RFFL-212ENST00000584655 MRPL16Q9NX20 251 aaKnown RBP7.71□□□□□ -1.17
RFFL-212ENST00000584655 LINC01619G3V211 115 aa7.71□□□□□ -1.18
RFFL-212ENST00000584655 LGALS1P09382 135 aaKnown RBP7.71□□□□□ -1.18
RFFL-212ENST00000584655 DNLZQ5SXM8 178 aa7.71□□□□□ -1.18
RFFL-212ENST00000584655 OR2K2Q8NGT1 345 aa7.7□□□□□ -1.18
RFFL-212ENST00000584655 IGLV1-40P01703 118 aa7.7□□□□□ -1.18
RFFL-212ENST00000584655 Q8N1Y9 231 aa7.7□□□□□ -1.18
RFFL-212ENST00000584655 MTURNQ8N3F0 131 aa7.7□□□□□ -1.18
RFFL-212ENST00000584655 RAX2Q96IS3 184 aa7.7□□□□□ -1.18
RFFL-212ENST00000584655 OPRPNQ99935 248 aaPredicted RBP7.7□□□□□ -1.18
RFFL-212ENST00000584655 GAGE10A6NGK3 116 aa7.7□□□□□ -1.18
RFFL-212ENST00000584655 GCSHP23434 173 aa7.7□□□□□ -1.18
RFFL-212ENST00000584655 Q0VG73 95 aa7.7□□□□□ -1.18
RFFL-212ENST00000584655 TMEM158Q8WZ71 300 aa7.7□□□□□ -1.18
RFFL-212ENST00000584655 URB1-AS1Q96HZ7 61 aa7.7□□□□□ -1.18
RFFL-212ENST00000584655 JMJD8Q96S16 334 aa7.7□□□□□ -1.18
RFFL-212ENST00000584655 FOXC2Q99958 501 aa7.7□□□□□ -1.18
RFFL-212ENST00000584655 TRAV8-6A0A0B4J262 113 aa7.69□□□□□ -1.18
RFFL-212ENST00000584655 TRAV21A0A0B4J279 112 aa7.69□□□□□ -1.18
RFFL-212ENST00000584655 H3BUT2 72 aa7.69□□□□□ -1.18
RFFL-212ENST00000584655 LYPD1Q8N2G4 141 aa7.69□□□□□ -1.18
RFFL-212ENST00000584655 OR9G4Q8NGQ1 327 aa7.69□□□□□ -1.18
RFFL-212ENST00000584655 TNFRSF6BO95407 300 aa7.69□□□□□ -1.18
RFFL-212ENST00000584655 DEFB130BP0DP73 79 aa7.69□□□□□ -1.18
RFFL-212ENST00000584655 DEFB130AP0DP74 79 aa7.69□□□□□ -1.18
RFFL-212ENST00000584655 OR10J3Q5JRS4 329 aa7.69□□□□□ -1.18
RFFL-212ENST00000584655 FAM104BQ5XKR9 115 aa7.69□□□□□ -1.18
RFFL-212ENST00000584655 FAM231DQ6ZW35 169 aa7.69□□□□□ -1.18
RFFL-212ENST00000584655 DKK2Q9UBU2 259 aa7.69□□□□□ -1.18
RFFL-212ENST00000584655 COX11Q9Y6N1 276 aa7.69□□□□□ -1.18
RFFL-212ENST00000584655 UBE2V1Q13404 147 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms