RNA–Protein interactions for RNA: ENST00000581868.1

RNF43-205, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-205ENST00000581868 C20orf78Q9BR46 151 aa10.36□□□□□ -0.75
RNF43-205ENST00000581868 MAP1AP78559 2803 aaPredicted RBP10.35□□□□□ -0.75
RNF43-205ENST00000581868 NDUFA4O00483 81 aa10.35□□□□□ -0.75
RNF43-205ENST00000581868 BAALCQ8WXS3 180 aa10.35□□□□□ -0.75
RNF43-205ENST00000581868 COL12A1Q99715 3063 aa10.35□□□□□ -0.75
RNF43-205ENST00000581868 PRSS29PA6NIE9 313 aa10.35□□□□□ -0.75
RNF43-205ENST00000581868 SOCS3O14543 225 aa10.35□□□□□ -0.75
RNF43-205ENST00000581868 PF4V1P10720 104 aa10.35□□□□□ -0.75
RNF43-205ENST00000581868 SCGB2A2Q13296 93 aa10.35□□□□□ -0.75
RNF43-205ENST00000581868 TRBV7-3A0A075B6L6 115 aa10.34□□□□□ -0.75
RNF43-205ENST00000581868 IGHV1-69DA0A0B4J2H0 117 aa10.34□□□□□ -0.75
RNF43-205ENST00000581868 RNF223E7ERA6 249 aa10.34□□□□□ -0.75
RNF43-205ENST00000581868 IGHV1-69P01742 117 aa10.34□□□□□ -0.75
RNF43-205ENST00000581868 LY6DQ14210 128 aa10.34□□□□□ -0.75
RNF43-205ENST00000581868 RNASE3P12724 160 aaKnown RBP10.33□□□□□ -0.76
RNF43-205ENST00000581868 SLC25A16P16260 332 aa10.33□□□□□ -0.76
RNF43-205ENST00000581868 PRADC1Q9BSG0 188 aa10.33□□□□□ -0.76
RNF43-205ENST00000581868 C19orf84I3L1E1 186 aa10.33□□□□□ -0.76
RNF43-205ENST00000581868 LGALS1P09382 135 aaKnown RBP10.33□□□□□ -0.76
RNF43-205ENST00000581868 EMP1P54849 157 aa10.33□□□□□ -0.76
RNF43-205ENST00000581868 SH2D6Q7Z4S9 175 aa10.33□□□□□ -0.76
RNF43-205ENST00000581868 ATP6V0BQ99437 205 aa10.33□□□□□ -0.76
RNF43-205ENST00000581868 RHPN1-AS1Q9BWJ2 59 aa10.33□□□□□ -0.76
RNF43-205ENST00000581868 DUSP14O95147 198 aaKnown RBP10.32□□□□□ -0.76
RNF43-205ENST00000581868 IGHV4-39P01824 125 aa10.32□□□□□ -0.76
RNF43-205ENST00000581868 JPT2Q9H910 190 aa10.32□□□□□ -0.76
RNF43-205ENST00000581868 ZNF815PA8K554 130 aa10.32□□□□□ -0.76
RNF43-205ENST00000581868 TMEM238C9JI98 176 aa10.32□□□□□ -0.76
RNF43-205ENST00000581868 IGHV4-38-2P0DP08 117 aa10.32□□□□□ -0.76
RNF43-205ENST00000581868 BLCAPP62952 87 aa10.32□□□□□ -0.76
RNF43-205ENST00000581868 RRN3P1Q2M238 152 aa10.32□□□□□ -0.76
RNF43-205ENST00000581868 SCGB1D4Q6XE38 83 aa10.32□□□□□ -0.76
RNF43-205ENST00000581868 Q6ZS46 218 aa10.32□□□□□ -0.76
RNF43-205ENST00000581868 F8W1H4 67 aa10.31□□□□□ -0.76
RNF43-205ENST00000581868 H3BUX3 64 aa10.31□□□□□ -0.76
RNF43-205ENST00000581868 EDN2P20800 178 aa10.31□□□□□ -0.76
RNF43-205ENST00000581868 ETDBQ3ZM63 59 aa10.31□□□□□ -0.76
RNF43-205ENST00000581868 CD300EQ496F6 205 aaPredicted RBP10.31□□□□□ -0.76
RNF43-205ENST00000581868 KLHL30-AS1Q8NEE0 82 aa10.31□□□□□ -0.76
RNF43-205ENST00000581868 ABCA2Q9BZC7 2435 aa10.3□□□□□ -0.76
RNF43-205ENST00000581868 HOXA3O43365 443 aaPredicted RBP10.3□□□□□ -0.76
RNF43-205ENST00000581868 CRIP2P52943 208 aaPredicted RBP10.3□□□□□ -0.76
RNF43-205ENST00000581868 PLEKHB2Q96CS7 222 aa10.3□□□□□ -0.76
RNF43-205ENST00000581868 FAM19A4Q96LR4 140 aa10.3□□□□□ -0.76
RNF43-205ENST00000581868 SPANXB1Q9NS25 103 aaPredicted RBP10.3□□□□□ -0.76
RNF43-205ENST00000581868 A0A087WWL8 130 aa10.3□□□□□ -0.76
RNF43-205ENST00000581868 IGHV4-61A0A0C4DH41 118 aa10.3□□□□□ -0.76
RNF43-205ENST00000581868 F5H697 171 aa10.3□□□□□ -0.76
RNF43-205ENST00000581868 NDUFS8O00217 210 aa10.3□□□□□ -0.76
RNF43-205ENST00000581868 SRSF9Q13242 221 aaKnown RBP eCLIP10.3□□□□□ -0.762e-10■□□□□ 10.8
RNF43-205ENST00000581868 GAGE13Q4V321 117 aa10.3□□□□□ -0.76
RNF43-205ENST00000581868 SFTA2Q6UW10 78 aa10.3□□□□□ -0.76
RNF43-205ENST00000581868 NCOR2Q9Y618 2525 aa10.3□□□□□ -0.76
RNF43-205ENST00000581868 USMG5Q96IX5 58 aa10.29□□□□□ -0.76
RNF43-205ENST00000581868 GTSF1LQ9H1H1 148 aa10.29□□□□□ -0.76
RNF43-205ENST00000581868 TP53TG1Q9Y2A0 90 aa10.29□□□□□ -0.76
RNF43-205ENST00000581868 CHD8Q9HCK8 2581 aa10.29□□□□□ -0.76
RNF43-205ENST00000581868 MUC4Q99102 2169 aa10.29□□□□□ -0.76
RNF43-205ENST00000581868 FAM159AQ6UWV7 190 aa10.29□□□□□ -0.76
RNF43-205ENST00000581868 PGPEP1Q9NXJ5 209 aa10.29□□□□□ -0.76
RNF43-205ENST00000581868 IGHG2P01859 326 aa10.28□□□□□ -0.76
RNF43-205ENST00000581868 CRYGDP07320 174 aa10.28□□□□□ -0.76
RNF43-205ENST00000581868 MED14OSP0DP75 135 aa10.28□□□□□ -0.76
RNF43-205ENST00000581868 RPL39P62891 51 aaKnown RBP10.28□□□□□ -0.76
RNF43-205ENST00000581868 TSSC4Q9Y5U2 329 aaPredicted RBP10.28□□□□□ -0.76
RNF43-205ENST00000581868 SPTBN4Q9H254 2564 aa10.28□□□□□ -0.76
RNF43-205ENST00000581868 TRAV12-3A0A0B4J271 114 aa10.28□□□□□ -0.76
RNF43-205ENST00000581868 PPP1R17O96001 155 aa10.28□□□□□ -0.76
RNF43-205ENST00000581868 MORN3Q6PF18 240 aaPredicted RBP10.28□□□□□ -0.76
RNF43-205ENST00000581868 MRPL16Q9NX20 251 aaKnown RBP10.28□□□□□ -0.76
RNF43-205ENST00000581868 A0A1B0GWB2 263 aa10.27□□□□□ -0.76
RNF43-205ENST00000581868 C11orf86A6NJI1 115 aa10.27□□□□□ -0.76
RNF43-205ENST00000581868 TSHBP01222 138 aa10.27□□□□□ -0.76
RNF43-205ENST00000581868 CD7P09564 240 aa10.27□□□□□ -0.76
RNF43-205ENST00000581868 LINC00315P59091 139 aa10.27□□□□□ -0.76
RNF43-205ENST00000581868 KIF25-AS1Q9Y6Z4 181 aa10.27□□□□□ -0.76
RNF43-205ENST00000581868 LINC01619G3V211 115 aa10.27□□□□□ -0.77
RNF43-205ENST00000581868 FAM74A4Q5TZK3 123 aa10.27□□□□□ -0.77
RNF43-205ENST00000581868 SUMO4Q6EEV6 95 aa10.27□□□□□ -0.77
RNF43-205ENST00000581868 APRG1Q8IVJ8 170 aa10.27□□□□□ -0.77
RNF43-205ENST00000581868 DAZ1Q9NQZ3 744 aaKnown RBP10.27□□□□□ -0.77
RNF43-205ENST00000581868 LINC01549A6NIU2 74 aa10.26□□□□□ -0.77
RNF43-205ENST00000581868 IGKV3-20P01619 116 aa10.26□□□□□ -0.77
RNF43-205ENST00000581868 SAMD13Q5VXD3 122 aa10.26□□□□□ -0.77
RNF43-205ENST00000581868 ZFP2Q6ZN57 461 aa10.26□□□□□ -0.77
RNF43-205ENST00000581868 AZU1P20160 251 aa10.26□□□□□ -0.77
RNF43-205ENST00000581868 SPAG8Q99932 426 aaPredicted RBP10.26□□□□□ -0.77
RNF43-205ENST00000581868 J3QR89 54 aa10.25□□□□□ -0.77
RNF43-205ENST00000581868 APOMO95445 188 aa10.25□□□□□ -0.77
RNF43-205ENST00000581868 COX6B1P14854 86 aa10.25□□□□□ -0.77
RNF43-205ENST00000581868 INSL3P51460 131 aa10.25□□□□□ -0.77
RNF43-205ENST00000581868 TMEM95Q3KNT9 176 aa10.25□□□□□ -0.77
RNF43-205ENST00000581868 IGLV4-69A0A075B6H9 119 aa10.25□□□□□ -0.77
RNF43-205ENST00000581868 LOC107984156A0A0G2JMH3 177 aa10.25□□□□□ -0.77
RNF43-205ENST00000581868 GAGE12HA6NDE8 117 aa10.25□□□□□ -0.77
RNF43-205ENST00000581868 A6NDX4 124 aa10.25□□□□□ -0.77
RNF43-205ENST00000581868 SMAGPQ0VAQ4 97 aa10.25□□□□□ -0.77
RNF43-205ENST00000581868 ARL17AQ8IVW1 177 aa10.25□□□□□ -0.77
RNF43-205ENST00000581868 KIR2DL4Q99706 377 aa10.25□□□□□ -0.77
RNF43-205ENST00000581868 SIGMAR1Q99720 223 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms