RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 ELOBQ15370 118 aa8.2□□□□□ -1.1
SS18-219ENST00000581570 GOLT1AQ6ZVE7 132 aa8.2□□□□□ -1.1
SS18-219ENST00000581570 OR2T35Q8NGX2 323 aa8.2□□□□□ -1.1
SS18-219ENST00000581570 C9orf85Q96MD7 179 aa8.2□□□□□ -1.1
SS18-219ENST00000581570 SAMD10Q9BYL1 202 aa8.2□□□□□ -1.1
SS18-219ENST00000581570 OTORQ9NRC9 128 aa8.2□□□□□ -1.1
SS18-219ENST00000581570 BTCP35070 178 aa8.19□□□□□ -1.1
SS18-219ENST00000581570 FGF8P55075 233 aaPredicted RBP8.19□□□□□ -1.1
SS18-219ENST00000581570 NHLH2Q02577 135 aa8.19□□□□□ -1.1
SS18-219ENST00000581570 RAB32Q13637 225 aa8.19□□□□□ -1.1
SS18-219ENST00000581570 CNPY1Q3B7I2 92 aa8.19□□□□□ -1.1
SS18-219ENST00000581570 FFAR4Q5NUL3 377 aa8.19□□□□□ -1.1
SS18-219ENST00000581570 FAM74A1Q5RGS3 127 aa8.19□□□□□ -1.1
SS18-219ENST00000581570 ATRAIDQ6UW56 229 aa8.19□□□□□ -1.1
SS18-219ENST00000581570 OR10G9Q8NGN4 311 aa8.19□□□□□ -1.1
SS18-219ENST00000581570 PARLQ9H300 379 aa8.19□□□□□ -1.1
SS18-219ENST00000581570 KCNIP2Q9NS61 270 aa8.19□□□□□ -1.1
SS18-219ENST00000581570 C11orf21Q9P2W6 132 aa8.19□□□□□ -1.1
SS18-219ENST00000581570 Q9UF83 564 aa8.19□□□□□ -1.1
SS18-219ENST00000581570 A0A087WX48 190 aa8.18□□□□□ -1.1
SS18-219ENST00000581570 A0A0D9SG52 128 aa8.18□□□□□ -1.1
SS18-219ENST00000581570 Q0VG73 95 aa8.18□□□□□ -1.1
SS18-219ENST00000581570 KCNIP4Q6PIL6 250 aa8.18□□□□□ -1.1
SS18-219ENST00000581570 ZFP2Q6ZN57 461 aa8.18□□□□□ -1.1
SS18-219ENST00000581570 OR5C1Q8NGR4 320 aa8.18□□□□□ -1.1
SS18-219ENST00000581570 C1orf43Q9BWL3 253 aa8.18□□□□□ -1.1
SS18-219ENST00000581570 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.18□□□□□ -1.1
SS18-219ENST00000581570 A8MWV9 139 aa8.17□□□□□ -1.1
SS18-219ENST00000581570 TAAR5O14804 337 aa8.17□□□□□ -1.1
SS18-219ENST00000581570 ZNF80P51504 273 aaPredicted RBP8.17□□□□□ -1.1
SS18-219ENST00000581570 IL15RAQ13261 267 aa8.17□□□□□ -1.1
SS18-219ENST00000581570 KHDC3LQ587J8 217 aa8.17□□□□□ -1.1
SS18-219ENST00000581570 DGAT2L7PQ6IED9 249 aa8.17□□□□□ -1.1
SS18-219ENST00000581570 C14orf178Q8N769 122 aaPredicted RBP8.17□□□□□ -1.1
SS18-219ENST00000581570 LINC00479Q96M42 142 aa8.17□□□□□ -1.1
SS18-219ENST00000581570 CHCHD7Q9BUK0 85 aa8.17□□□□□ -1.1
SS18-219ENST00000581570 WDR61Q9GZS3 305 aaKnown RBP8.17□□□□□ -1.1
SS18-219ENST00000581570 DPH3P1Q9H4G8 78 aa8.17□□□□□ -1.1
SS18-219ENST00000581570 MBD2Q9UBB5 411 aa8.17□□□□□ -1.1
SS18-219ENST00000581570 USP17L23D6RBM5 183 aa8.16□□□□□ -1.1
SS18-219ENST00000581570 C17orf112F2Z3M2 114 aa8.16□□□□□ -1.1
SS18-219ENST00000581570 PANO1I0J062 215 aa8.16□□□□□ -1.1
SS18-219ENST00000581570 RNASE3P12724 160 aaKnown RBP8.16□□□□□ -1.1
SS18-219ENST00000581570 TAS2R45P59539 299 aa8.16□□□□□ -1.1
SS18-219ENST00000581570 LGALSLQ3ZCW2 172 aaPredicted RBP8.16□□□□□ -1.1
SS18-219ENST00000581570 ARL6IP6Q8N6S5 226 aa8.16□□□□□ -1.1
SS18-219ENST00000581570 C9orf163Q8N9P6 203 aa8.16□□□□□ -1.1
SS18-219ENST00000581570 TMEM75Q8N9X5 138 aa8.16□□□□□ -1.1
SS18-219ENST00000581570 HSD17B11Q8NBQ5 300 aa8.16□□□□□ -1.1
SS18-219ENST00000581570 ZC2HC1AQ96GY0 325 aa8.16□□□□□ -1.1
SS18-219ENST00000581570 SGK494Q96LW2 274 aa8.16□□□□□ -1.1
SS18-219ENST00000581570 SEC22CQ9BRL7 303 aa8.16□□□□□ -1.1
SS18-219ENST00000581570 NDFIP1Q9BT67 221 aa8.16□□□□□ -1.1
SS18-219ENST00000581570 PRSS1P07477 247 aa8.15□□□□□ -1.1
SS18-219ENST00000581570 TMEM262E9PQX1 116 aa8.14□□□□□ -1.11
SS18-219ENST00000581570 EIF4EBP3O60516 100 aaPredicted RBP8.14□□□□□ -1.11
SS18-219ENST00000581570 EIF3GO75821 320 aaKnown RBP eCLIP8.14□□□□□ -1.11
SS18-219ENST00000581570 GCGP01275 180 aa8.14□□□□□ -1.11
SS18-219ENST00000581570 H2AFB1P0C5Y9 115 aa8.14□□□□□ -1.11
SS18-219ENST00000581570 H2AFB2P0C5Z0 115 aa8.14□□□□□ -1.11
SS18-219ENST00000581570 GNG5P63218 68 aa8.14□□□□□ -1.11
SS18-219ENST00000581570 UFSP1Q6NVU6 142 aa8.14□□□□□ -1.11
SS18-219ENST00000581570 ENHOQ6UWT2 76 aa8.14□□□□□ -1.11
SS18-219ENST00000581570 SDIM1Q6ZPB5 146 aa8.14□□□□□ -1.11
SS18-219ENST00000581570 JPT2Q9H910 190 aa8.14□□□□□ -1.11
SS18-219ENST00000581570 HLA-DQA1P01909 254 aa8.13□□□□□ -1.11
SS18-219ENST00000581570 CRPP02741 224 aa8.13□□□□□ -1.11
SS18-219ENST00000581570 S100A4P26447 101 aaKnown RBP8.13□□□□□ -1.11
SS18-219ENST00000581570 PIK3CD-AS1Q5SR53 167 aa8.13□□□□□ -1.11
SS18-219ENST00000581570 OR2G3Q8NGZ4 309 aa8.13□□□□□ -1.11
SS18-219ENST00000581570 SDHCQ99643 169 aaPredicted RBP8.13□□□□□ -1.11
SS18-219ENST00000581570 SSBP4Q9BWG4 385 aaPredicted RBP8.13□□□□□ -1.11
SS18-219ENST00000581570 TRAV6A0A075B6T7 132 aa8.12□□□□□ -1.11
SS18-219ENST00000581570 GAS8-AS1O95177 125 aa8.12□□□□□ -1.11
SS18-219ENST00000581570 RPL19P84098 196 aaKnown RBP8.12□□□□□ -1.11
SS18-219ENST00000581570 ODF1Q14990 250 aa8.12□□□□□ -1.11
SS18-219ENST00000581570 SMUG1Q53HV7 270 aa8.12□□□□□ -1.11
SS18-219ENST00000581570 OR10G7Q8NGN6 311 aa8.12□□□□□ -1.11
SS18-219ENST00000581570 DPH3Q96FX2 82 aa8.12□□□□□ -1.11
SS18-219ENST00000581570 OR5AC2Q9NZP5 309 aa8.12□□□□□ -1.11
SS18-219ENST00000581570 SERTM2A0A1B0GWG4 89 aa8.11□□□□□ -1.11
SS18-219ENST00000581570 TCRBP04435 133 aa8.11□□□□□ -1.11
SS18-219ENST00000581570 C15orf54Q8N8G6 183 aa8.11□□□□□ -1.11
SS18-219ENST00000581570 LINC01600Q96MT4 127 aa8.11□□□□□ -1.11
SS18-219ENST00000581570 PSG8Q9UQ74 426 aa8.11□□□□□ -1.11
SS18-219ENST00000581570 RHODO00212 210 aa8.1□□□□□ -1.11
SS18-219ENST00000581570 IL7P13232 177 aa8.1□□□□□ -1.11
SS18-219ENST00000581570 CIRBPQ14011 172 aaKnown RBP8.1□□□□□ -1.11
SS18-219ENST00000581570 ZFP69Q49AA0 526 aa8.1□□□□□ -1.11
SS18-219ENST00000581570 PQLC2Q6ZP29 291 aa8.1□□□□□ -1.11
SS18-219ENST00000581570 IGKV3D-20A0A0C4DH25 116 aa8.09□□□□□ -1.11
SS18-219ENST00000581570 CCDC160A6NGH7 325 aa8.09□□□□□ -1.11
SS18-219ENST00000581570 K7EQM0 130 aa8.09□□□□□ -1.11
SS18-219ENST00000581570 PLA2G10O15496 165 aa8.09□□□□□ -1.11
SS18-219ENST00000581570 ANGP03950 147 aaKnown RBP8.09□□□□□ -1.11
SS18-219ENST00000581570 TCRAP04437 139 aa8.09□□□□□ -1.11
SS18-219ENST00000581570 FAM74A4Q5TZK3 123 aa8.09□□□□□ -1.11
SS18-219ENST00000581570 PRNTQ86SH4 94 aa8.09□□□□□ -1.11
SS18-219ENST00000581570 NUDT15Q9NV35 164 aa8.09□□□□□ -1.11
SS18-219ENST00000581570 A0A087WYN8 130 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms