RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 TTTY13Q9BZ97 58 aa2.52□□□□□ -2.01
NF1-220ENST00000581113 BANF2Q9H503 90 aa2.52□□□□□ -2.01
NF1-220ENST00000581113 ZNF586Q9NXT0 402 aa2.52□□□□□ -2.01
NF1-220ENST00000581113 IL36BQ9NZH7 164 aa2.52□□□□□ -2.01
NF1-220ENST00000581113 FUT9Q9Y231 359 aa2.52□□□□□ -2.01
NF1-220ENST00000581113 HIVEP2P31629 2446 aa2.52□□□□□ -2.01
NF1-220ENST00000581113 NSD1Q96L73 2696 aaPredicted RBP2.52□□□□□ -2.01
NF1-220ENST00000581113 CSPG4Q6UVK1 2322 aa2.52□□□□□ -2.01
NF1-220ENST00000581113 USF3Q68DE3 2245 aa2.52□□□□□ -2.01
NF1-220ENST00000581113 IGHV3-66A0A0C4DH42 116 aa2.52□□□□□ -2.01
NF1-220ENST00000581113 E7EQL1 145 aa2.52□□□□□ -2.01
NF1-220ENST00000581113 AKAIN1P0CW23 69 aa2.52□□□□□ -2.01
NF1-220ENST00000581113 P0DMU3 169 aa2.52□□□□□ -2.01
NF1-220ENST00000581113 FAM231AP0DMU4 169 aa2.52□□□□□ -2.01
NF1-220ENST00000581113 FAM231CP0DMU5 169 aa2.52□□□□□ -2.01
NF1-220ENST00000581113 PSMB8P28062 276 aa2.52□□□□□ -2.01
NF1-220ENST00000581113 LGALS9BQ3B8N2 356 aa2.52□□□□□ -2.01
NF1-220ENST00000581113 AMMECR1LQ6DCA0 310 aa2.52□□□□□ -2.01
NF1-220ENST00000581113 LGALS9CQ6DKI2 356 aa2.52□□□□□ -2.01
NF1-220ENST00000581113 MORN3Q6PF18 240 aaPredicted RBP2.52□□□□□ -2.01
NF1-220ENST00000581113 AAED1Q7RTV5 226 aa2.52□□□□□ -2.01
NF1-220ENST00000581113 TRAPPC6BQ86SZ2 158 aa2.52□□□□□ -2.01
NF1-220ENST00000581113 BPIFA4PQ86YQ2 179 aa2.52□□□□□ -2.01
NF1-220ENST00000581113 DEDD2Q8WXF8 326 aa2.52□□□□□ -2.01
NF1-220ENST00000581113 RBPMSQ93062 196 aaKnown RBP2.52□□□□□ -2.01
NF1-220ENST00000581113 TMEM106AQ96A25 262 aa2.52□□□□□ -2.01
NF1-220ENST00000581113 C2orf50Q96LR7 162 aa2.52□□□□□ -2.01
NF1-220ENST00000581113 B9D2Q9BPU9 175 aa2.52□□□□□ -2.01
NF1-220ENST00000581113 DERL1Q9BUN8 251 aa2.52□□□□□ -2.01
NF1-220ENST00000581113 SCRT1Q9BWW7 348 aa2.52□□□□□ -2.01
NF1-220ENST00000581113 C1QTNF6Q9BXI9 259 aa2.52□□□□□ -2.01
NF1-220ENST00000581113 SNHG12Q9BXW3 62 aa2.52□□□□□ -2.01
NF1-220ENST00000581113 ZNF443Q9Y2A4 671 aaPredicted RBP2.52□□□□□ -2.01
NF1-220ENST00000581113 PHLDA3Q9Y5J5 127 aa2.52□□□□□ -2.01
NF1-220ENST00000581113 SOX21Q9Y651 276 aaPredicted RBP2.52□□□□□ -2.01
NF1-220ENST00000581113 DSCAMO60469 2012 aa2.51□□□□□ -2.01
NF1-220ENST00000581113 JMJD1CQ15652 2540 aa2.51□□□□□ -2.01
NF1-220ENST00000581113 DSPPQ9NZW4 1301 aa2.51□□□□□ -2.01
NF1-220ENST00000581113 TRAV30A0A087WSZ9 112 aa2.51□□□□□ -2.01
NF1-220ENST00000581113 A0A096LNT2 108 aa2.51□□□□□ -2.01
NF1-220ENST00000581113 IGHV3-49A0A0A0MS15 119 aa2.51□□□□□ -2.01
NF1-220ENST00000581113 IGKV1-9A0A0C4DH69 117 aa2.51□□□□□ -2.01
NF1-220ENST00000581113 IGHV7-4-1A0A0J9YVY3 117 aa2.51□□□□□ -2.01
NF1-220ENST00000581113 A6NED7 52 aa2.51□□□□□ -2.01
NF1-220ENST00000581113 APCSP02743 223 aa2.51□□□□□ -2.01
NF1-220ENST00000581113 TRGV3P03979 118 aa2.51□□□□□ -2.01
NF1-220ENST00000581113 TCRAP04437 139 aa2.51□□□□□ -2.01
NF1-220ENST00000581113 PRM2P04554 102 aa2.51□□□□□ -2.01
NF1-220ENST00000581113 CD7P09564 240 aa2.51□□□□□ -2.01
NF1-220ENST00000581113 SLC25A16P16260 332 aa2.51□□□□□ -2.01
NF1-220ENST00000581113 LGALS3P17931 250 aaKnown RBP2.51□□□□□ -2.01
NF1-220ENST00000581113 CSN1S1P47710 185 aa2.51□□□□□ -2.01
NF1-220ENST00000581113 POLR2JP52435 117 aaKnown RBP2.51□□□□□ -2.01
NF1-220ENST00000581113 FOXA3P55318 350 aaPredicted RBP2.51□□□□□ -2.01
NF1-220ENST00000581113 HOXC5Q00444 222 aa2.51□□□□□ -2.01
NF1-220ENST00000581113 MOBPQ13875 183 aa2.51□□□□□ -2.01
NF1-220ENST00000581113 KISS1Q15726 138 aa2.51□□□□□ -2.01
NF1-220ENST00000581113 MEIG1Q5JSS6 88 aa2.51□□□□□ -2.01
NF1-220ENST00000581113 FAM104BQ5XKR9 115 aa2.51□□□□□ -2.01
NF1-220ENST00000581113 ZNF767PQ75MW2 155 aa2.51□□□□□ -2.01
NF1-220ENST00000581113 ACBD7Q8N6N7 88 aa2.51□□□□□ -2.01
NF1-220ENST00000581113 FER1L6-AS1Q8NA97 138 aa2.51□□□□□ -2.01
NF1-220ENST00000581113 OR5D14Q8NGL3 314 aa2.51□□□□□ -2.01
NF1-220ENST00000581113 OR5H6Q8NGV6 325 aa2.51□□□□□ -2.01
NF1-220ENST00000581113 UBALD1Q8TB05 177 aa2.51□□□□□ -2.01
NF1-220ENST00000581113 PP6455Q8WZ26 134 aa2.51□□□□□ -2.01
NF1-220ENST00000581113 ADAT1Q9BUB4 502 aaKnown RBP2.51□□□□□ -2.01
NF1-220ENST00000581113 BCL2L10Q9HD36 194 aa2.51□□□□□ -2.01
NF1-220ENST00000581113 TLN2Q9Y4G6 2542 aa2.51□□□□□ -2.01
NF1-220ENST00000581113 PRR14LQ5THK1 2151 aa2.5□□□□□ -2.01
NF1-220ENST00000581113 DSCAML1Q8TD84 2053 aa2.5□□□□□ -2.01
NF1-220ENST00000581113 ANK3Q12955 4377 aaKnown RBP2.5□□□□□ -2.01
NF1-220ENST00000581113 IGLV1-50A0A075B6I6 118 aa2.5□□□□□ -2.01
NF1-220ENST00000581113 IGHV1-18A0A0C4DH31 117 aa2.5□□□□□ -2.01
NF1-220ENST00000581113 ARRDC5A6NEK1 342 aa2.5□□□□□ -2.01
NF1-220ENST00000581113 CST7O76096 145 aa2.5□□□□□ -2.01
NF1-220ENST00000581113 MPC2O95563 127 aa2.5□□□□□ -2.01
NF1-220ENST00000581113 CD2P06729 351 aa2.5□□□□□ -2.01
NF1-220ENST00000581113 HLA-DMBP28068 263 aa2.5□□□□□ -2.01
NF1-220ENST00000581113 EFNA4P52798 201 aa2.5□□□□□ -2.01
NF1-220ENST00000581113 TAS2R45P59539 299 aa2.5□□□□□ -2.01
NF1-220ENST00000581113 S100A10P60903 97 aa2.5□□□□□ -2.01
NF1-220ENST00000581113 CCL20P78556 96 aa2.5□□□□□ -2.01
NF1-220ENST00000581113 LINC01554Q52M75 96 aa2.5□□□□□ -2.01
NF1-220ENST00000581113 C6orf52Q5T4I8 152 aa2.5□□□□□ -2.01
NF1-220ENST00000581113 Q6ZR03 302 aa2.5□□□□□ -2.01
NF1-220ENST00000581113 MSRB3Q8IXL7 192 aa2.5□□□□□ -2.01
NF1-220ENST00000581113 C10orf105Q8TEF2 133 aa2.5□□□□□ -2.01
NF1-220ENST00000581113 CMBLQ96DG6 245 aa2.5□□□□□ -2.01
NF1-220ENST00000581113 ZNF471Q9BX82 626 aaPredicted RBP2.5□□□□□ -2.01
NF1-220ENST00000581113 MRPL32Q9BYC8 188 aaKnown RBP2.5□□□□□ -2.01
NF1-220ENST00000581113 GABARAPL1Q9H0R8 117 aa2.5□□□□□ -2.01
NF1-220ENST00000581113 TUBA4BQ9H853 241 aa2.5□□□□□ -2.01
NF1-220ENST00000581113 C21orf62Q9NYP8 219 aa2.5□□□□□ -2.01
NF1-220ENST00000581113 ZNF222Q9UK12 451 aa2.5□□□□□ -2.01
NF1-220ENST00000581113 CADP27708 2225 aa2.5□□□□□ -2.01
NF1-220ENST00000581113 NUP214P35658 2090 aaPredicted RBP2.5□□□□□ -2.01
NF1-220ENST00000581113 FREM1Q5H8C1 2179 aa2.49□□□□□ -2.01
NF1-220ENST00000581113 ZANQ9Y493 2812 aa2.49□□□□□ -2.01
NF1-220ENST00000581113 HEATR5AQ86XA9 2040 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms