RNA–Protein interactions for RNA: ENST00000580997.1

SENP3-204, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 679 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-204ENST00000580997 TMEM75Q8N9X5 138 aa8.44□□□□□ -1.06
SENP3-204ENST00000580997 INO80EQ8NBZ0 244 aaPredicted RBP8.44□□□□□ -1.06
SENP3-204ENST00000580997 C9orf85Q96MD7 179 aa8.44□□□□□ -1.06
SENP3-204ENST00000580997 TRBV6-4A0A1B0GX49 114 aa8.43□□□□□ -1.06
SENP3-204ENST00000580997 RS1O15537 224 aa8.43□□□□□ -1.06
SENP3-204ENST00000580997 ERVFC1-1P60608 527 aa8.43□□□□□ -1.06
SENP3-204ENST00000580997 SMUG1Q53HV7 270 aa8.43□□□□□ -1.06
SENP3-204ENST00000580997 RPL7L1Q6DKI1 246 aaKnown RBP8.43□□□□□ -1.06
SENP3-204ENST00000580997 CDPF1Q6NVV7 123 aa8.43□□□□□ -1.06
SENP3-204ENST00000580997 DPPA3Q6W0C5 159 aa8.43□□□□□ -1.06
SENP3-204ENST00000580997 SLC25A29Q8N8R3 303 aa8.43□□□□□ -1.06
SENP3-204ENST00000580997 MSRB1Q9NZV6 116 aa8.43□□□□□ -1.06
SENP3-204ENST00000580997 A0A087WTM6 91 aa8.42□□□□□ -1.06
SENP3-204ENST00000580997 EREGO14944 169 aa8.42□□□□□ -1.06
SENP3-204ENST00000580997 RNASE3P12724 160 aaKnown RBP8.42□□□□□ -1.06
SENP3-204ENST00000580997 ZNF726P1Q15940 193 aa8.42□□□□□ -1.06
SENP3-204ENST00000580997 PRNTQ86SH4 94 aa8.42□□□□□ -1.06
SENP3-204ENST00000580997 LINC00479Q96M42 142 aa8.42□□□□□ -1.06
SENP3-204ENST00000580997 BORCS7-ASMTA0A0B4J1R7 106 aa8.41□□□□□ -1.06
SENP3-204ENST00000580997 IGHV3-38A0A0C4DH36 116 aa8.41□□□□□ -1.06
SENP3-204ENST00000580997 PGPEP1LA6NFU8 196 aa8.41□□□□□ -1.06
SENP3-204ENST00000580997 ZFP69Q49AA0 526 aa8.41□□□□□ -1.06
SENP3-204ENST00000580997 PIK3CD-AS1Q5SR53 167 aa8.41□□□□□ -1.06
SENP3-204ENST00000580997 C10orf126Q8N4M7 172 aa8.41□□□□□ -1.06
SENP3-204ENST00000580997 SCRT2Q9NQ03 307 aa8.41□□□□□ -1.06
SENP3-204ENST00000580997 IGKV3D-20A0A0C4DH25 116 aa8.4□□□□□ -1.06
SENP3-204ENST00000580997 CTXND1A0A1B0GTU2 59 aa8.4□□□□□ -1.06
SENP3-204ENST00000580997 G3V3Q6 166 aa8.4□□□□□ -1.06
SENP3-204ENST00000580997 CRYGDP07320 174 aa8.4□□□□□ -1.06
SENP3-204ENST00000580997 RHOHQ15669 191 aa8.4□□□□□ -1.06
SENP3-204ENST00000580997 LINC01556Q5JQF7 62 aa8.4□□□□□ -1.06
SENP3-204ENST00000580997 ZNF506Q5JVG8 444 aa8.4□□□□□ -1.06
SENP3-204ENST00000580997 NHLRC2Q8NBF2 726 aa8.4□□□□□ -1.06
SENP3-204ENST00000580997 OR2T35Q8NGX2 323 aa8.4□□□□□ -1.06
SENP3-204ENST00000580997 PRADC1Q9BSG0 188 aa8.4□□□□□ -1.06
SENP3-204ENST00000580997 NKX6-2Q9C056 277 aaPredicted RBP8.4□□□□□ -1.06
SENP3-204ENST00000580997 FXYD6-FXYD2A0A087WZ82 144 aa8.39□□□□□ -1.07
SENP3-204ENST00000580997 FABP5P3A8MUU1 101 aa8.39□□□□□ -1.07
SENP3-204ENST00000580997 MGST1P10620 155 aaKnown RBP8.39□□□□□ -1.07
SENP3-204ENST00000580997 COX8CQ7Z4L0 72 aa8.39□□□□□ -1.07
SENP3-204ENST00000580997 ARL2-SNX15V9GYD0 113 aa8.39□□□□□ -1.07
SENP3-204ENST00000580997 VPS13BQ7Z7G8 4022 aa8.38□□□□□ -1.07
SENP3-204ENST00000580997 TRAV8-6A0A0B4J262 113 aa8.38□□□□□ -1.07
SENP3-204ENST00000580997 TRAV34A0A0B4J273 112 aa8.38□□□□□ -1.07
SENP3-204ENST00000580997 FAM74A7A6NL05 159 aa8.38□□□□□ -1.07
SENP3-204ENST00000580997 IBA57-AS1B1ANH7 110 aa8.38□□□□□ -1.07
SENP3-204ENST00000580997 IFNA7P01567 189 aa8.38□□□□□ -1.07
SENP3-204ENST00000580997 FUSP35637 526 aaKnown RBP eCLIP8.38□□□□□ -1.07
SENP3-204ENST00000580997 PPT1P50897 306 aa8.38□□□□□ -1.07
SENP3-204ENST00000580997 DNLZQ5SXM8 178 aa8.38□□□□□ -1.07
SENP3-204ENST00000580997 ZFP2Q6ZN57 461 aa8.38□□□□□ -1.07
SENP3-204ENST00000580997 HIST1H2BAQ96A08 127 aa8.38□□□□□ -1.07
SENP3-204ENST00000580997 IGHV3-73A0A0B4J1V6 119 aa8.37□□□□□ -1.07
SENP3-204ENST00000580997 LRCOL1A6NCL2 159 aa8.37□□□□□ -1.07
SENP3-204ENST00000580997 A8MWV9 139 aa8.37□□□□□ -1.07
SENP3-204ENST00000580997 PEX7O00628 323 aa8.37□□□□□ -1.07
SENP3-204ENST00000580997 CRIP1P50238 77 aa8.37□□□□□ -1.07
SENP3-204ENST00000580997 XGP55808 180 aa8.37□□□□□ -1.07
SENP3-204ENST00000580997 LELP1Q5T871 98 aa8.37□□□□□ -1.07
SENP3-204ENST00000580997 UFSP1Q6NVU6 142 aa8.37□□□□□ -1.07
SENP3-204ENST00000580997 Q6ZSN1 163 aa8.37□□□□□ -1.07
SENP3-204ENST00000580997 GTSF1LQ9H1H1 148 aa8.37□□□□□ -1.07
SENP3-204ENST00000580997 CYTL1Q9NRR1 136 aa8.37□□□□□ -1.07
SENP3-204ENST00000580997 IL36BQ9NZH7 164 aa8.37□□□□□ -1.07
SENP3-204ENST00000580997 LINC00694P0DN24 101 aa8.36□□□□□ -1.07
SENP3-204ENST00000580997 FGF8P55075 233 aaPredicted RBP8.36□□□□□ -1.07
SENP3-204ENST00000580997 KRTAP10-1P60331 282 aa8.36□□□□□ -1.07
SENP3-204ENST00000580997 UBE2G2P60604 165 aa8.36□□□□□ -1.07
SENP3-204ENST00000580997 OR10J3Q5JRS4 329 aa8.36□□□□□ -1.07
SENP3-204ENST00000580997 AKR1C8PQ5T2L2 129 aa8.36□□□□□ -1.07
SENP3-204ENST00000580997 Q86TA4 180 aa8.36□□□□□ -1.07
SENP3-204ENST00000580997 KRTAP4-11Q9BYQ6 195 aa8.36□□□□□ -1.07
SENP3-204ENST00000580997 PARLQ9H300 379 aa8.36□□□□□ -1.07
SENP3-204ENST00000580997 ZFP30Q9Y2G7 519 aa8.36□□□□□ -1.07
SENP3-204ENST00000580997 TRBV6-1A0A0K0K1D8 114 aa8.35□□□□□ -1.07
SENP3-204ENST00000580997 KRBOX1C9JBD0 128 aa8.35□□□□□ -1.07
SENP3-204ENST00000580997 S100A4P26447 101 aaKnown RBP8.35□□□□□ -1.07
SENP3-204ENST00000580997 ASIPP42127 132 aa8.35□□□□□ -1.07
SENP3-204ENST00000580997 FHITP49789 147 aa8.35□□□□□ -1.07
SENP3-204ENST00000580997 RGS21Q2M5E4 152 aa8.35□□□□□ -1.07
SENP3-204ENST00000580997 ATP6V0E2Q8NHE4 81 aa8.35□□□□□ -1.07
SENP3-204ENST00000580997 ZC2HC1AQ96GY0 325 aa8.35□□□□□ -1.07
SENP3-204ENST00000580997 TCEAL7Q9BRU2 100 aa8.35□□□□□ -1.07
SENP3-204ENST00000580997 FAT1Q14517 4588 aa8.34□□□□□ -1.07
SENP3-204ENST00000580997 MAP1LC3B2A6NCE7 125 aa8.34□□□□□ -1.07
SENP3-204ENST00000580997 B4DEV8 164 aa8.34□□□□□ -1.07
SENP3-204ENST00000580997 ARPC5O15511 151 aa8.34□□□□□ -1.07
SENP3-204ENST00000580997 LAGE3Q14657 143 aa8.34□□□□□ -1.07
SENP3-204ENST00000580997 FMC1Q96HJ9 113 aa8.34□□□□□ -1.07
SENP3-204ENST00000580997 MAP1LC3BQ9GZQ8 125 aa8.34□□□□□ -1.07
SENP3-204ENST00000580997 EPM2AB3EWF7 344 aa8.33□□□□□ -1.08
SENP3-204ENST00000580997 PSCAO43653 123 aa8.33□□□□□ -1.08
SENP3-204ENST00000580997 ARMS2P0C7Q2 107 aa8.33□□□□□ -1.08
SENP3-204ENST00000580997 GCSHP23434 173 aa8.33□□□□□ -1.08
SENP3-204ENST00000580997 ZNF674Q2M3X9 581 aa8.33□□□□□ -1.08
SENP3-204ENST00000580997 LGALSLQ3ZCW2 172 aaPredicted RBP8.33□□□□□ -1.08
SENP3-204ENST00000580997 NTN5Q8WTR8 489 aaPredicted RBP8.33□□□□□ -1.08
SENP3-204ENST00000580997 SAMD10Q9BYL1 202 aa8.33□□□□□ -1.08
SENP3-204ENST00000580997 JPT2Q9H910 190 aa8.33□□□□□ -1.08
SENP3-204ENST00000580997 Q9UF83 564 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms