RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 ZNF575Q86XF7 245 aa11.15□□□□□ -0.62
SS18-216ENST00000580751 IL17DQ8TAD2 202 aa11.15□□□□□ -0.62
SS18-216ENST00000580751 TMEM263Q8WUH6 116 aaKnown RBP11.15□□□□□ -0.62
SS18-216ENST00000580751 GTSF1Q8WW33 167 aa11.15□□□□□ -0.62
SS18-216ENST00000580751 BORCS7Q96B45 105 aa11.15□□□□□ -0.62
SS18-216ENST00000580751 C16orf74Q96GX8 76 aa11.15□□□□□ -0.62
SS18-216ENST00000580751 CNFNQ9BYD5 112 aa11.15□□□□□ -0.62
SS18-216ENST00000580751 TEX48A0A1B0GUV7 120 aa11.14□□□□□ -0.63
SS18-216ENST00000580751 SCO1O75880 301 aa11.14□□□□□ -0.63
SS18-216ENST00000580751 TYMSP04818 313 aa11.14□□□□□ -0.63
SS18-216ENST00000580751 EMP1P54849 157 aa11.14□□□□□ -0.63
SS18-216ENST00000580751 FER1L6-AS1Q8NA97 138 aa11.14□□□□□ -0.63
SS18-216ENST00000580751 NUP35Q8NFH5 326 aa11.14□□□□□ -0.63
SS18-216ENST00000580751 NAGKQ9UJ70 344 aa11.14□□□□□ -0.63
SS18-216ENST00000580751 CBY3A6NI87 242 aa11.13□□□□□ -0.63
SS18-216ENST00000580751 SNAI2O43623 268 aa11.13□□□□□ -0.63
SS18-216ENST00000580751 S100A8P05109 93 aa11.13□□□□□ -0.63
SS18-216ENST00000580751 S100A4P26447 101 aaKnown RBP11.13□□□□□ -0.63
SS18-216ENST00000580751 CACNG7P62955 275 aa11.13□□□□□ -0.63
SS18-216ENST00000580751 C11orf45Q8TAV5 145 aa11.13□□□□□ -0.63
SS18-216ENST00000580751 RNASE8Q8TDE3 154 aaKnown RBP11.13□□□□□ -0.63
SS18-216ENST00000580751 SCRT2Q9NQ03 307 aa11.13□□□□□ -0.63
SS18-216ENST00000580751 IGHV4-4A0A075B6R2 117 aa11.12□□□□□ -0.63
SS18-216ENST00000580751 TMSB15BA0A087X1C1 80 aa11.12□□□□□ -0.63
SS18-216ENST00000580751 A0A1B0GUT8 65 aa11.12□□□□□ -0.63
SS18-216ENST00000580751 PRM2P04554 102 aa11.12□□□□□ -0.63
SS18-216ENST00000580751 AZU1P20160 251 aa11.12□□□□□ -0.63
SS18-216ENST00000580751 FAM3BP58499 235 aaPredicted RBP11.12□□□□□ -0.63
SS18-216ENST00000580751 RIGQ13278 110 aa11.12□□□□□ -0.63
SS18-216ENST00000580751 PIK3CD-AS1Q5SR53 167 aa11.12□□□□□ -0.63
SS18-216ENST00000580751 MUC21Q5SSG8 566 aa11.12□□□□□ -0.63
SS18-216ENST00000580751 Q6ZQT7 251 aa11.12□□□□□ -0.63
SS18-216ENST00000580751 PTH2Q96A98 100 aa11.12□□□□□ -0.63
SS18-216ENST00000580751 NDUFAF3Q9BU61 184 aa11.12□□□□□ -0.63
SS18-216ENST00000580751 URGCP-MRPS24S4R325 110 aa11.12□□□□□ -0.63
SS18-216ENST00000580751 IGHV3-16A0A0C4DH30 117 aa11.11□□□□□ -0.63
SS18-216ENST00000580751 COLCA2A8K830 154 aa11.11□□□□□ -0.63
SS18-216ENST00000580751 SPART-AS1P0CW21 52 aa11.11□□□□□ -0.63
SS18-216ENST00000580751 TCL1AP56279 114 aa11.11□□□□□ -0.63
SS18-216ENST00000580751 MUC7Q8TAX7 377 aa11.11□□□□□ -0.63
SS18-216ENST00000580751 FAM210BQ96KR6 192 aa11.11□□□□□ -0.63
SS18-216ENST00000580751 PLAC8L1A1L4L8 177 aa11.1□□□□□ -0.63
SS18-216ENST00000580751 GRIFINA4D1Z8 144 aa11.1□□□□□ -0.63
SS18-216ENST00000580751 LYRM9A8MSI8 78 aa11.1□□□□□ -0.63
SS18-216ENST00000580751 SNURFLB1AK76 121 aa11.1□□□□□ -0.63
SS18-216ENST00000580751 ARMS2P0C7Q2 107 aa11.1□□□□□ -0.63
SS18-216ENST00000580751 GZMBP10144 247 aa11.1□□□□□ -0.63
SS18-216ENST00000580751 ZNF415Q09FC8 603 aa11.1□□□□□ -0.63
SS18-216ENST00000580751 FAM222AQ5U5X8 452 aa11.1□□□□□ -0.63
SS18-216ENST00000580751 LYZL1Q6UWQ5 148 aa11.1□□□□□ -0.63
SS18-216ENST00000580751 PGLYRP4Q96LB8 373 aa11.1□□□□□ -0.63
SS18-216ENST00000580751 DKK2Q9UBU2 259 aa11.1□□□□□ -0.63
SS18-216ENST00000580751 TIMM8BQ9Y5J9 83 aaPredicted RBP11.1□□□□□ -0.63
SS18-216ENST00000580751 DNAH7Q8WXX0 4024 aa11.09□□□□□ -0.63
SS18-216ENST00000580751 GNRH2O43555 120 aa11.09□□□□□ -0.63
SS18-216ENST00000580751 MT-ND6P03923 174 aa11.09□□□□□ -0.63
SS18-216ENST00000580751 RNASE3P12724 160 aaKnown RBP11.09□□□□□ -0.63
SS18-216ENST00000580751 C9orf85Q96MD7 179 aa11.09□□□□□ -0.63
SS18-216ENST00000580751 SPXQ9BT56 116 aa11.09□□□□□ -0.63
SS18-216ENST00000580751 CELA1Q9UNI1 258 aa11.09□□□□□ -0.63
SS18-216ENST00000580751 TGIF2-C20orf24A0A0A6YYL0 155 aa11.08□□□□□ -0.64
SS18-216ENST00000580751 A0A1B0GXF2 115 aa11.08□□□□□ -0.64
SS18-216ENST00000580751 NXPH4O95158 308 aa11.08□□□□□ -0.64
SS18-216ENST00000580751 NANOS2P60321 138 aaKnown RBP11.08□□□□□ -0.64
SS18-216ENST00000580751 HBBP68871 147 aa11.08□□□□□ -0.64
SS18-216ENST00000580751 ZFP82Q8N141 532 aa11.08□□□□□ -0.64
SS18-216ENST00000580751 GATD1Q8NB37 220 aa11.08□□□□□ -0.64
SS18-216ENST00000580751 SYT8Q8NBV8 401 aa11.08□□□□□ -0.64
SS18-216ENST00000580751 TPPP3Q9BW30 176 aa11.08□□□□□ -0.64
SS18-216ENST00000580751 GNB1LQ9BYB4 327 aa11.08□□□□□ -0.64
SS18-216ENST00000580751 PHLDA3Q9Y5J5 127 aa11.08□□□□□ -0.64
SS18-216ENST00000580751 C3orf84H3BNL1 204 aa11.07□□□□□ -0.64
SS18-216ENST00000580751 H3BVH4 76 aa11.07□□□□□ -0.64
SS18-216ENST00000580751 RAB5AP20339 215 aa11.07□□□□□ -0.64
SS18-216ENST00000580751 C11orf72Q8NBR9 251 aa11.07□□□□□ -0.64
SS18-216ENST00000580751 GSN-AS1Q9NRJ2 163 aa11.07□□□□□ -0.64
SS18-216ENST00000580751 DAZ2Q13117 558 aaKnown RBP11.06□□□□□ -0.64
SS18-216ENST00000580751 SPANXN1Q5VSR9 72 aa11.06□□□□□ -0.64
SS18-216ENST00000580751 NOP10Q9NPE3 64 aaKnown RBP11.06□□□□□ -0.64
SS18-216ENST00000580751 MDFICQ9P1T7 246 aa11.06□□□□□ -0.64
SS18-216ENST00000580751 M0R2P5 195 aa11.05□□□□□ -0.64
SS18-216ENST00000580751 HLA-DQA1P01909 254 aa11.05□□□□□ -0.64
SS18-216ENST00000580751 TRGC1P0CF51 173 aa11.05□□□□□ -0.64
SS18-216ENST00000580751 NTF3P20783 257 aa11.05□□□□□ -0.64
SS18-216ENST00000580751 DAD1P61803 113 aa11.05□□□□□ -0.64
SS18-216ENST00000580751 TWIST1Q15672 202 aa11.05□□□□□ -0.64
SS18-216ENST00000580751 C12orf74Q32Q52 190 aa11.05□□□□□ -0.64
SS18-216ENST00000580751 LGALS9BQ3B8N2 356 aa11.05□□□□□ -0.64
SS18-216ENST00000580751 MRPL54Q6P161 138 aaKnown RBP11.05□□□□□ -0.64
SS18-216ENST00000580751 SMIM15Q7Z3B0 74 aa11.05□□□□□ -0.64
SS18-216ENST00000580751 NUPR2A6NF83 97 aa11.04□□□□□ -0.64
SS18-216ENST00000580751 Q6ZTC4 211 aa11.04□□□□□ -0.64
SS18-216ENST00000580751 OR10AG1Q8NH19 301 aa11.04□□□□□ -0.64
SS18-216ENST00000580751 DEFB130BP0DP73 79 aa11.03□□□□□ -0.64
SS18-216ENST00000580751 DEFB130AP0DP74 79 aa11.03□□□□□ -0.64
SS18-216ENST00000580751 ZFAND6Q6FIF0 208 aa11.03□□□□□ -0.64
SS18-216ENST00000580751 PHLDA1Q8WV24 401 aaPredicted RBP11.03□□□□□ -0.64
SS18-216ENST00000580751 FRZBQ92765 325 aa11.03□□□□□ -0.64
SS18-216ENST00000580751 TMEM191AQ9H0A3 160 aa11.03□□□□□ -0.64
SS18-216ENST00000580751 TRAV10A0A0B4J240 114 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms