RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 ARL2-SNX15V9GYD0 113 aa9.79□□□□□ -0.84
SMARCE1-216ENST00000580419 TRAV8-6A0A0B4J262 113 aa9.78□□□□□ -0.84
SMARCE1-216ENST00000580419 FABP5P3A8MUU1 101 aa9.78□□□□□ -0.84
SMARCE1-216ENST00000580419 A8MWV9 139 aa9.78□□□□□ -0.84
SMARCE1-216ENST00000580419 IBA57-AS1B1ANH7 110 aa9.78□□□□□ -0.84
SMARCE1-216ENST00000580419 RNASE3P12724 160 aaKnown RBP9.78□□□□□ -0.84
SMARCE1-216ENST00000580419 LELP1Q5T871 98 aa9.78□□□□□ -0.84
SMARCE1-216ENST00000580419 NTN5Q8WTR8 489 aaPredicted RBP9.78□□□□□ -0.84
SMARCE1-216ENST00000580419 SCRT2Q9NQ03 307 aa9.78□□□□□ -0.84
SMARCE1-216ENST00000580419 IL36BQ9NZH7 164 aa9.78□□□□□ -0.84
SMARCE1-216ENST00000580419 FHITP49789 147 aa9.77□□□□□ -0.85
SMARCE1-216ENST00000580419 ZFP30Q9Y2G7 519 aa9.77□□□□□ -0.85
SMARCE1-216ENST00000580419 TRBV6-1A0A0K0K1D8 114 aa9.76□□□□□ -0.85
SMARCE1-216ENST00000580419 Q5BKY6 102 aa9.76□□□□□ -0.85
SMARCE1-216ENST00000580419 ZNF506Q5JVG8 444 aa9.76□□□□□ -0.85
SMARCE1-216ENST00000580419 RPL7L1Q6DKI1 246 aaKnown RBP9.76□□□□□ -0.85
SMARCE1-216ENST00000580419 NHLRC2Q8NBF2 726 aa9.76□□□□□ -0.85
SMARCE1-216ENST00000580419 GTSF1LQ9H1H1 148 aa9.76□□□□□ -0.85
SMARCE1-216ENST00000580419 IGKV3D-20A0A0C4DH25 116 aa9.75□□□□□ -0.85
SMARCE1-216ENST00000580419 PGPEP1LA6NFU8 196 aa9.75□□□□□ -0.85
SMARCE1-216ENST00000580419 LINC00694P0DN24 101 aa9.75□□□□□ -0.85
SMARCE1-216ENST00000580419 ZNF726P1Q15940 193 aa9.75□□□□□ -0.85
SMARCE1-216ENST00000580419 DPPA3Q6W0C5 159 aa9.75□□□□□ -0.85
SMARCE1-216ENST00000580419 PRNTQ86SH4 94 aa9.75□□□□□ -0.85
SMARCE1-216ENST00000580419 OR2T35Q8NGX2 323 aa9.75□□□□□ -0.85
SMARCE1-216ENST00000580419 TNFRSF18Q9Y5U5 241 aa9.75□□□□□ -0.85
SMARCE1-216ENST00000580419 FAT1Q14517 4588 aa9.74□□□□□ -0.85
SMARCE1-216ENST00000580419 A0A087WWC5 75 aa9.74□□□□□ -0.85
SMARCE1-216ENST00000580419 LOC100131303A0A0U1RQF7 123 aa9.74□□□□□ -0.85
SMARCE1-216ENST00000580419 LRCOL1A6NCL2 159 aa9.74□□□□□ -0.85
SMARCE1-216ENST00000580419 FAM74A7A6NL05 159 aa9.74□□□□□ -0.85
SMARCE1-216ENST00000580419 RHODO00212 210 aa9.74□□□□□ -0.85
SMARCE1-216ENST00000580419 PEX7O00628 323 aa9.74□□□□□ -0.85
SMARCE1-216ENST00000580419 FGF8P55075 233 aaPredicted RBP9.74□□□□□ -0.85
SMARCE1-216ENST00000580419 ATP6V0E2Q8NHE4 81 aa9.74□□□□□ -0.85
SMARCE1-216ENST00000580419 SGK494Q96LW2 274 aa9.74□□□□□ -0.85
SMARCE1-216ENST00000580419 FXYD6-FXYD2A0A087WZ82 144 aa9.73□□□□□ -0.85
SMARCE1-216ENST00000580419 IFNA7P01567 189 aa9.73□□□□□ -0.85
SMARCE1-216ENST00000580419 C1QBP02746 253 aa9.73□□□□□ -0.85
SMARCE1-216ENST00000580419 ASIPP42127 132 aa9.73□□□□□ -0.85
SMARCE1-216ENST00000580419 XGP55808 180 aa9.73□□□□□ -0.85
SMARCE1-216ENST00000580419 AKR1C8PQ5T2L2 129 aa9.73□□□□□ -0.85
SMARCE1-216ENST00000580419 UFSP1Q6NVU6 142 aa9.73□□□□□ -0.85
SMARCE1-216ENST00000580419 Q86TA4 180 aa9.73□□□□□ -0.85
SMARCE1-216ENST00000580419 FMC1Q96HJ9 113 aa9.73□□□□□ -0.85
SMARCE1-216ENST00000580419 LINC00479Q96M42 142 aa9.73□□□□□ -0.85
SMARCE1-216ENST00000580419 PARLQ9H300 379 aa9.73□□□□□ -0.85
SMARCE1-216ENST00000580419 VPS13BQ7Z7G8 4022 aa9.72□□□□□ -0.85
SMARCE1-216ENST00000580419 G3V3Q6 166 aa9.72□□□□□ -0.85
SMARCE1-216ENST00000580419 S100A4P26447 101 aaKnown RBP9.72□□□□□ -0.85
SMARCE1-216ENST00000580419 TMEM70Q9BUB7 260 aa9.72□□□□□ -0.85
SMARCE1-216ENST00000580419 DMBT1Q9UGM3 2413 aaPredicted RBP9.72□□□□□ -0.85
SMARCE1-216ENST00000580419 EPM2AB3EWF7 344 aa9.71□□□□□ -0.86
SMARCE1-216ENST00000580419 GCSHP23434 173 aa9.71□□□□□ -0.86
SMARCE1-216ENST00000580419 ZNF345Q14585 488 aa9.71□□□□□ -0.86
SMARCE1-216ENST00000580419 OR10J3Q5JRS4 329 aa9.71□□□□□ -0.86
SMARCE1-216ENST00000580419 TOR2AQ5JU69 321 aa9.71□□□□□ -0.86
SMARCE1-216ENST00000580419 FAM162BQ5T6X4 162 aa9.71□□□□□ -0.86
SMARCE1-216ENST00000580419 SYT8Q8NBV8 401 aa9.71□□□□□ -0.86
SMARCE1-216ENST00000580419 STOML3Q8TAV4 291 aa9.71□□□□□ -0.86
SMARCE1-216ENST00000580419 TM2D2Q9BX73 214 aa9.71□□□□□ -0.86
SMARCE1-216ENST00000580419 CYTL1Q9NRR1 136 aa9.71□□□□□ -0.86
SMARCE1-216ENST00000580419 SRRM2Q9UQ35 2752 aaKnown RBP9.7□□□□□ -0.86
SMARCE1-216ENST00000580419 TRAV8-3A0A0A6YYJ7 113 aa9.7□□□□□ -0.86
SMARCE1-216ENST00000580419 B4DEV8 164 aa9.7□□□□□ -0.86
SMARCE1-216ENST00000580419 KRBOX1C9JBD0 128 aa9.7□□□□□ -0.86
SMARCE1-216ENST00000580419 PSCAO43653 123 aa9.7□□□□□ -0.86
SMARCE1-216ENST00000580419 S100A9P06702 114 aaKnown RBP9.7□□□□□ -0.86
SMARCE1-216ENST00000580419 SEC11BP0C7V7 166 aa9.7□□□□□ -0.86
SMARCE1-216ENST00000580419 ZNF674Q2M3X9 581 aa9.7□□□□□ -0.86
SMARCE1-216ENST00000580419 RGS21Q2M5E4 152 aa9.7□□□□□ -0.86
SMARCE1-216ENST00000580419 LINC01559Q495D7 138 aa9.7□□□□□ -0.86
SMARCE1-216ENST00000580419 COX11Q9Y6N1 276 aa9.7□□□□□ -0.86
SMARCE1-216ENST00000580419 TRAV34A0A0B4J273 112 aa9.69□□□□□ -0.86
SMARCE1-216ENST00000580419 MAP1LC3B2A6NCE7 125 aa9.69□□□□□ -0.86
SMARCE1-216ENST00000580419 UMAD1C9J7I0 102 aa9.69□□□□□ -0.86
SMARCE1-216ENST00000580419 LTAP01374 205 aa9.69□□□□□ -0.86
SMARCE1-216ENST00000580419 CXCL1P09341 107 aa9.69□□□□□ -0.86
SMARCE1-216ENST00000580419 CRIP1P50238 77 aa9.69□□□□□ -0.86
SMARCE1-216ENST00000580419 KRTAP10-1P60331 282 aa9.69□□□□□ -0.86
SMARCE1-216ENST00000580419 CHCHD7Q9BUK0 85 aa9.69□□□□□ -0.86
SMARCE1-216ENST00000580419 MAP1LC3BQ9GZQ8 125 aa9.69□□□□□ -0.86
SMARCE1-216ENST00000580419 TRBV10-1A0A0K0K1A3 114 aa9.68□□□□□ -0.86
SMARCE1-216ENST00000580419 HMSDA8MTL9 139 aa9.68□□□□□ -0.86
SMARCE1-216ENST00000580419 LGALSLQ3ZCW2 172 aaPredicted RBP9.68□□□□□ -0.86
SMARCE1-216ENST00000580419 Q8N814 137 aa9.68□□□□□ -0.86
SMARCE1-216ENST00000580419 MBD3L1Q8WWY6 194 aa9.68□□□□□ -0.86
SMARCE1-216ENST00000580419 ZC2HC1AQ96GY0 325 aa9.68□□□□□ -0.86
SMARCE1-216ENST00000580419 UBE2G2P60604 165 aa9.67□□□□□ -0.86
SMARCE1-216ENST00000580419 UBE2G1P62253 170 aa9.67□□□□□ -0.86
SMARCE1-216ENST00000580419 Q6ZSN1 163 aa9.67□□□□□ -0.86
SMARCE1-216ENST00000580419 KCNRGQ8N5I3 272 aa9.67□□□□□ -0.86
SMARCE1-216ENST00000580419 OR11H4Q8NGC9 324 aa9.67□□□□□ -0.86
SMARCE1-216ENST00000580419 FRZBQ92765 325 aa9.67□□□□□ -0.86
SMARCE1-216ENST00000580419 SFRP2Q96HF1 295 aa9.67□□□□□ -0.86
SMARCE1-216ENST00000580419 DNAH8Q96JB1 4490 aa9.66□□□□□ -0.86
SMARCE1-216ENST00000580419 IGHV3-73A0A0B4J1V6 119 aa9.66□□□□□ -0.86
SMARCE1-216ENST00000580419 ARPC5O15511 151 aa9.66□□□□□ -0.86
SMARCE1-216ENST00000580419 SH2D1AO60880 128 aa9.66□□□□□ -0.86
SMARCE1-216ENST00000580419 ARMS2P0C7Q2 107 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms