RNA–Protein interactions for RNA: ENST00000578958.1

SLC9A3R1-203, Transcript of SLC9A3 regulator 1, humanhuman

TSL 2

Gene SLC9A3R1, Length 714 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3R1-203ENST00000578958 UBE2G2P60604 165 aa11.87□□□□□ -0.51
SLC9A3R1-203ENST00000578958 OR2T35Q8NGX2 323 aa11.87□□□□□ -0.51
SLC9A3R1-203ENST00000578958 TRAV34A0A0B4J273 112 aa11.86□□□□□ -0.51
SLC9A3R1-203ENST00000578958 PGPEP1LA6NFU8 196 aa11.86□□□□□ -0.51
SLC9A3R1-203ENST00000578958 MGST1P10620 155 aaKnown RBP11.86□□□□□ -0.51
SLC9A3R1-203ENST00000578958 LGALSLQ3ZCW2 172 aaPredicted RBP11.86□□□□□ -0.51
SLC9A3R1-203ENST00000578958 ZNF506Q5JVG8 444 aa11.86□□□□□ -0.51
SLC9A3R1-203ENST00000578958 LINC00479Q96M42 142 aa11.86□□□□□ -0.51
SLC9A3R1-203ENST00000578958 C9orf85Q96MD7 179 aa11.86□□□□□ -0.51
SLC9A3R1-203ENST00000578958 RNF222A6NCQ9 220 aa11.85□□□□□ -0.51
SLC9A3R1-203ENST00000578958 FABP5P3A8MUU1 101 aa11.85□□□□□ -0.51
SLC9A3R1-203ENST00000578958 ASIPP42127 132 aa11.85□□□□□ -0.51
SLC9A3R1-203ENST00000578958 DPPA3Q6W0C5 159 aa11.85□□□□□ -0.51
SLC9A3R1-203ENST00000578958 PTH2Q96A98 100 aa11.85□□□□□ -0.51
SLC9A3R1-203ENST00000578958 NKX6-2Q9C056 277 aaPredicted RBP11.85□□□□□ -0.51
SLC9A3R1-203ENST00000578958 ARL2-SNX15V9GYD0 113 aa11.85□□□□□ -0.51
SLC9A3R1-203ENST00000578958 A8MWV9 139 aa11.84□□□□□ -0.51
SLC9A3R1-203ENST00000578958 PEX7O00628 323 aa11.84□□□□□ -0.51
SLC9A3R1-203ENST00000578958 RNASE3P12724 160 aaKnown RBP11.84□□□□□ -0.51
SLC9A3R1-203ENST00000578958 FGF8P55075 233 aaPredicted RBP11.84□□□□□ -0.51
SLC9A3R1-203ENST00000578958 LINC01556Q5JQF7 62 aa11.84□□□□□ -0.51
SLC9A3R1-203ENST00000578958 ATP6V0E2Q8NHE4 81 aa11.84□□□□□ -0.51
SLC9A3R1-203ENST00000578958 LELP1Q5T871 98 aa11.83□□□□□ -0.52
SLC9A3R1-203ENST00000578958 HIST1H2BAQ96A08 127 aa11.83□□□□□ -0.52
SLC9A3R1-203ENST00000578958 GTSF1LQ9H1H1 148 aa11.83□□□□□ -0.52
SLC9A3R1-203ENST00000578958 Q9HAA7 133 aa11.83□□□□□ -0.52
SLC9A3R1-203ENST00000578958 EPM2AB3EWF7 344 aa11.82□□□□□ -0.52
SLC9A3R1-203ENST00000578958 B4DEV8 164 aa11.82□□□□□ -0.52
SLC9A3R1-203ENST00000578958 IGHV3-30P01768 117 aa11.82□□□□□ -0.52
SLC9A3R1-203ENST00000578958 IGHV3-33P01772 117 aa11.82□□□□□ -0.52
SLC9A3R1-203ENST00000578958 IGHV3-30-3P0DP02 117 aa11.82□□□□□ -0.52
SLC9A3R1-203ENST00000578958 IGHV3-30-5P0DP03 117 aa11.82□□□□□ -0.52
SLC9A3R1-203ENST00000578958 ZNF726P1Q15940 193 aa11.82□□□□□ -0.52
SLC9A3R1-203ENST00000578958 SYT8Q8NBV8 401 aa11.82□□□□□ -0.52
SLC9A3R1-203ENST00000578958 STOML3Q8TAV4 291 aa11.82□□□□□ -0.52
SLC9A3R1-203ENST00000578958 IGKV3D-20A0A0C4DH25 116 aa11.81□□□□□ -0.52
SLC9A3R1-203ENST00000578958 FAM74A7A6NL05 159 aa11.81□□□□□ -0.52
SLC9A3R1-203ENST00000578958 IBA57-AS1B1ANH7 110 aa11.81□□□□□ -0.52
SLC9A3R1-203ENST00000578958 ARPC5O15511 151 aa11.81□□□□□ -0.52
SLC9A3R1-203ENST00000578958 GCSHP23434 173 aa11.81□□□□□ -0.52
SLC9A3R1-203ENST00000578958 UBE2G1P62253 170 aa11.81□□□□□ -0.52
SLC9A3R1-203ENST00000578958 RGS21Q2M5E4 152 aa11.81□□□□□ -0.52
SLC9A3R1-203ENST00000578958 ZFP2Q6ZN57 461 aa11.81□□□□□ -0.52
SLC9A3R1-203ENST00000578958 Q86TA4 180 aa11.81□□□□□ -0.52
SLC9A3R1-203ENST00000578958 MAP1LC3B2A6NCE7 125 aa11.8□□□□□ -0.52
SLC9A3R1-203ENST00000578958 GAGE12JA6NER3 117 aa11.8□□□□□ -0.52
SLC9A3R1-203ENST00000578958 GAGE1Q13065 139 aa11.8□□□□□ -0.52
SLC9A3R1-203ENST00000578958 GAGE4Q13068 117 aa11.8□□□□□ -0.52
SLC9A3R1-203ENST00000578958 GAGE5Q13069 117 aa11.8□□□□□ -0.52
SLC9A3R1-203ENST00000578958 GAGE13Q4V321 117 aa11.8□□□□□ -0.52
SLC9A3R1-203ENST00000578958 PIK3CD-AS1Q5SR53 167 aa11.8□□□□□ -0.52
SLC9A3R1-203ENST00000578958 MAP1LC3BQ9GZQ8 125 aa11.8□□□□□ -0.52
SLC9A3R1-203ENST00000578958 PARLQ9H300 379 aa11.8□□□□□ -0.52
SLC9A3R1-203ENST00000578958 ZFP30Q9Y2G7 519 aa11.8□□□□□ -0.52
SLC9A3R1-203ENST00000578958 H3BVH4 76 aa11.79□□□□□ -0.52
SLC9A3R1-203ENST00000578958 M0R036 132 aa11.79□□□□□ -0.52
SLC9A3R1-203ENST00000578958 CST9LP1Q5W188 147 aa11.79□□□□□ -0.52
SLC9A3R1-203ENST00000578958 FMC1Q96HJ9 113 aa11.79□□□□□ -0.52
SLC9A3R1-203ENST00000578958 IL36BQ9NZH7 164 aa11.79□□□□□ -0.52
SLC9A3R1-203ENST00000578958 IGLV5-52A0A0A0MRZ9 124 aa11.78□□□□□ -0.52
SLC9A3R1-203ENST00000578958 FAM162BQ5T6X4 162 aa11.78□□□□□ -0.52
SLC9A3R1-203ENST00000578958 TM2D2Q9BX73 214 aa11.78□□□□□ -0.52
SLC9A3R1-203ENST00000578958 ARMS2P0C7Q2 107 aa11.77□□□□□ -0.53
SLC9A3R1-203ENST00000578958 KRTAP10-1P60331 282 aa11.77□□□□□ -0.53
SLC9A3R1-203ENST00000578958 OR11H4Q8NGC9 324 aa11.77□□□□□ -0.53
SLC9A3R1-203ENST00000578958 FRZBQ92765 325 aa11.77□□□□□ -0.53
SLC9A3R1-203ENST00000578958 ZC2HC1AQ96GY0 325 aa11.77□□□□□ -0.53
SLC9A3R1-203ENST00000578958 PHLDA3Q9Y5J5 127 aa11.77□□□□□ -0.53
SLC9A3R1-203ENST00000578958 GRIFINA4D1Z8 144 aa11.76□□□□□ -0.53
SLC9A3R1-203ENST00000578958 KRBOX1C9JBD0 128 aa11.76□□□□□ -0.53
SLC9A3R1-203ENST00000578958 RHODO00212 210 aa11.76□□□□□ -0.53
SLC9A3R1-203ENST00000578958 SH2D1AO60880 128 aa11.76□□□□□ -0.53
SLC9A3R1-203ENST00000578958 TPT1P13693 172 aaKnown RBP11.76□□□□□ -0.53
SLC9A3R1-203ENST00000578958 FAM74A4Q5TZK3 123 aa11.76□□□□□ -0.53
SLC9A3R1-203ENST00000578958 DMRTA1Q5VZB9 504 aa11.76□□□□□ -0.53
SLC9A3R1-203ENST00000578958 Q6ZSN1 163 aa11.76□□□□□ -0.53
SLC9A3R1-203ENST00000578958 NTN5Q8WTR8 489 aaPredicted RBP11.76□□□□□ -0.53
SLC9A3R1-203ENST00000578958 TCEAL7Q9BRU2 100 aa11.76□□□□□ -0.53
SLC9A3R1-203ENST00000578958 A0A087WWC5 75 aa11.75□□□□□ -0.53
SLC9A3R1-203ENST00000578958 TMSB15BA0A087X1C1 80 aa11.75□□□□□ -0.53
SLC9A3R1-203ENST00000578958 AKR1C3P42330 323 aa11.75□□□□□ -0.53
SLC9A3R1-203ENST00000578958 XGP55808 180 aa11.75□□□□□ -0.53
SLC9A3R1-203ENST00000578958 LAGE3Q14657 143 aa11.75□□□□□ -0.53
SLC9A3R1-203ENST00000578958 JPT2Q9H910 190 aa11.75□□□□□ -0.53
SLC9A3R1-203ENST00000578958 URGCP-MRPS24S4R325 110 aa11.75□□□□□ -0.53
SLC9A3R1-203ENST00000578958 M0R381 172 aa11.74□□□□□ -0.53
SLC9A3R1-203ENST00000578958 FHITP49789 147 aa11.74□□□□□ -0.53
SLC9A3R1-203ENST00000578958 CRIP1P50238 77 aa11.74□□□□□ -0.53
SLC9A3R1-203ENST00000578958 TOR2AQ5JU69 321 aa11.74□□□□□ -0.53
SLC9A3R1-203ENST00000578958 SAMD10Q9BYL1 202 aa11.74□□□□□ -0.53
SLC9A3R1-203ENST00000578958 CYTL1Q9NRR1 136 aa11.74□□□□□ -0.53
SLC9A3R1-203ENST00000578958 TRAV8-3A0A0A6YYJ7 113 aa11.73□□□□□ -0.53
SLC9A3R1-203ENST00000578958 LRCOL1A6NCL2 159 aa11.73□□□□□ -0.53
SLC9A3R1-203ENST00000578958 SMLR1H3BR10 107 aa11.73□□□□□ -0.53
SLC9A3R1-203ENST00000578958 DNLZQ5SXM8 178 aa11.73□□□□□ -0.53
SLC9A3R1-203ENST00000578958 C14orf178Q8N769 122 aaPredicted RBP11.73□□□□□ -0.53
SLC9A3R1-203ENST00000578958 Q8N814 137 aa11.73□□□□□ -0.53
SLC9A3R1-203ENST00000578958 A0A087WWL8 130 aa11.72□□□□□ -0.53
SLC9A3R1-203ENST00000578958 G3V3Q6 166 aa11.72□□□□□ -0.53
SLC9A3R1-203ENST00000578958 KCNIP4Q6PIL6 250 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 212.5 ms