RNA–Protein interactions for RNA: ENST00000578681.5

DDX42-208, Transcript of DEAD-box helicase 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX42, Length 4,337 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-208ENST00000578681 LYRM7Q5U5X0 104 aa12.83□□□□□ -0.36
DDX42-208ENST00000578681 EBLN2Q6P2I7 272 aa12.82□□□□□ -0.36
DDX42-208ENST00000578681 K7ERJ3 54 aa12.82□□□□□ -0.36
DDX42-208ENST00000578681 CTRLP40313 264 aa12.82□□□□□ -0.36
DDX42-208ENST00000578681 FAM223BA6NKX1 122 aa12.82□□□□□ -0.36
DDX42-208ENST00000578681 FOXE3Q13461 319 aa12.82□□□□□ -0.36
DDX42-208ENST00000578681 FAM223AQ8IWN6 122 aa12.82□□□□□ -0.36
DDX42-208ENST00000578681 C20orf78Q9BR46 151 aa12.82□□□□□ -0.36
DDX42-208ENST00000578681 GFRA4Q9GZZ7 299 aa12.82□□□□□ -0.36
DDX42-208ENST00000578681 H7C2G1 150 aa12.81□□□□□ -0.36
DDX42-208ENST00000578681 SRSF9Q13242 221 aaKnown RBP eCLIP12.81□□□□□ -0.36
DDX42-208ENST00000578681 Q96MF0 132 aa12.81□□□□□ -0.36
DDX42-208ENST00000578681 C19orf71A6NCJ1 209 aa12.81□□□□□ -0.36
DDX42-208ENST00000578681 TCTEX1D4Q5JR98 221 aa12.81□□□□□ -0.36
DDX42-208ENST00000578681 FAM159AQ6UWV7 190 aa12.81□□□□□ -0.36
DDX42-208ENST00000578681 DYNLRB2Q8TF09 96 aa12.81□□□□□ -0.36
DDX42-208ENST00000578681 Q8N6K4 173 aa12.81□□□□□ -0.36
DDX42-208ENST00000578681 MBD6Q96DN6 1003 aa12.81□□□□□ -0.36
DDX42-208ENST00000578681 PRSS22Q9GZN4 317 aa12.81□□□□□ -0.36
DDX42-208ENST00000578681 OR11H12B2RN74 326 aa12.81□□□□□ -0.36
DDX42-208ENST00000578681 ZNF80P51504 273 aaPredicted RBP12.81□□□□□ -0.36
DDX42-208ENST00000578681 OR11H1Q8NG94 326 aa12.81□□□□□ -0.36
DDX42-208ENST00000578681 OR11H2Q8NH07 326 aa12.81□□□□□ -0.36
DDX42-208ENST00000578681 CFAP46Q8IYW2 2715 aa12.81□□□□□ -0.36
DDX42-208ENST00000578681 IGHV3OR16-12A0A075B7B8 117 aa12.8□□□□□ -0.36
DDX42-208ENST00000578681 SLC25A16P16260 332 aa12.8□□□□□ -0.36
DDX42-208ENST00000578681 HIST2H2BCQ6DN03 193 aa12.8□□□□□ -0.36
DDX42-208ENST00000578681 HIST2H2BDQ6DRA6 164 aa12.8□□□□□ -0.36
DDX42-208ENST00000578681 CITED2Q99967 270 aaPredicted RBP12.8□□□□□ -0.36
DDX42-208ENST00000578681 EBI3Q14213 229 aa12.8□□□□□ -0.36
DDX42-208ENST00000578681 DUX3Q96PT4 197 aa12.8□□□□□ -0.36
DDX42-208ENST00000578681 WIPF2Q8TF74 440 aaPredicted RBP12.8□□□□□ -0.36
DDX42-208ENST00000578681 TRAV26-2A0A0B4J265 109 aa12.79□□□□□ -0.36
DDX42-208ENST00000578681 IGHV1-24A0A0C4DH33 117 aa12.79□□□□□ -0.36
DDX42-208ENST00000578681 CRIP1P50238 77 aa12.79□□□□□ -0.36
DDX42-208ENST00000578681 SCGB1D4Q6XE38 83 aa12.79□□□□□ -0.36
DDX42-208ENST00000578681 AVPP01185 164 aa12.79□□□□□ -0.36
DDX42-208ENST00000578681 DSCR9P59020 149 aa12.79□□□□□ -0.36
DDX42-208ENST00000578681 CACNG7P62955 275 aa12.79□□□□□ -0.36
DDX42-208ENST00000578681 USMG5Q96IX5 58 aa12.79□□□□□ -0.36
DDX42-208ENST00000578681 SPAG8Q99932 426 aaPredicted RBP12.79□□□□□ -0.36
DDX42-208ENST00000578681 C10orf99Q6UWK7 81 aa12.79□□□□□ -0.36
DDX42-208ENST00000578681 MS4A6AQ9H2W1 248 aa12.79□□□□□ -0.36
DDX42-208ENST00000578681 SPENQ96T58 3664 aaKnown RBP12.79□□□□□ -0.36
DDX42-208ENST00000578681 K7EMI3 77 aa12.79□□□□□ -0.36
DDX42-208ENST00000578681 IGLV2-11P01706 119 aa12.79□□□□□ -0.36
DDX42-208ENST00000578681 LEPP41159 167 aa12.79□□□□□ -0.36
DDX42-208ENST00000578681 MT-ATP8P03928 68 aa12.78□□□□□ -0.36
DDX42-208ENST00000578681 CD7P09564 240 aa12.78□□□□□ -0.36
DDX42-208ENST00000578681 GATA1P15976 413 aaPredicted RBP12.78□□□□□ -0.36
DDX42-208ENST00000578681 ASIPP42127 132 aa12.78□□□□□ -0.36
DDX42-208ENST00000578681 DAZ1Q9NQZ3 744 aaKnown RBP12.78□□□□□ -0.36
DDX42-208ENST00000578681 SMAD5-AS1Q9Y6J3 95 aa12.78□□□□□ -0.36
DDX42-208ENST00000578681 TRAV12-3A0A0B4J271 114 aa12.78□□□□□ -0.36
DDX42-208ENST00000578681 SNRPD3P62318 126 aaKnown RBP12.78□□□□□ -0.36
DDX42-208ENST00000578681 MRPL51Q4U2R6 128 aaKnown RBP12.78□□□□□ -0.36
DDX42-208ENST00000578681 C9orf139Q6ZV77 190 aa12.78□□□□□ -0.36
DDX42-208ENST00000578681 SPATA12Q7Z6I5 190 aa12.78□□□□□ -0.36
DDX42-208ENST00000578681 F8W735 103 aaPredicted RBP12.78□□□□□ -0.36
DDX42-208ENST00000578681 CHCHD1Q96BP2 118 aaKnown RBP12.78□□□□□ -0.36
DDX42-208ENST00000578681 LINC00310P59036 64 aa12.77□□□□□ -0.36
DDX42-208ENST00000578681 DEFB136Q30KP8 78 aa12.77□□□□□ -0.36
DDX42-208ENST00000578681 FAM104BQ5XKR9 115 aa12.77□□□□□ -0.36
DDX42-208ENST00000578681 C14orf178Q8N769 122 aaPredicted RBP12.77□□□□□ -0.36
DDX42-208ENST00000578681 MYOZ3Q8TDC0 251 aa12.77□□□□□ -0.37
DDX42-208ENST00000578681 AJUBAQ96IF1 538 aa12.77□□□□□ -0.37
DDX42-208ENST00000578681 ZNF256Q9Y2P7 627 aaPredicted RBP12.77□□□□□ -0.37
DDX42-208ENST00000578681 HOXA3O43365 443 aaPredicted RBP12.77□□□□□ -0.37
DDX42-208ENST00000578681 NPYP01303 97 aa12.76□□□□□ -0.37
DDX42-208ENST00000578681 TRAV21A0A0B4J279 112 aa12.76□□□□□ -0.37
DDX42-208ENST00000578681 USP24Q9UPU5 2620 aa12.76□□□□□ -0.37
DDX42-208ENST00000578681 F8W1H4 67 aa12.75□□□□□ -0.37
DDX42-208ENST00000578681 TMEM160Q9NX00 188 aa12.75□□□□□ -0.37
DDX42-208ENST00000578681 TRAV12-2A0A075B6T6 113 aa12.75□□□□□ -0.37
DDX42-208ENST00000578681 RPL13AP40429 203 aaKnown RBP12.75□□□□□ -0.37
DDX42-208ENST00000578681 OR13C6PQ8NH95 151 aa12.75□□□□□ -0.37
DDX42-208ENST00000578681 FOXC2Q99958 501 aa12.74□□□□□ -0.37
DDX42-208ENST00000578681 NDUFA4O00483 81 aa12.74□□□□□ -0.37
DDX42-208ENST00000578681 IGF1P05019 195 aa12.74□□□□□ -0.37
DDX42-208ENST00000578681 BBC3Q96PG8 261 aaPredicted RBP12.74□□□□□ -0.37
DDX42-208ENST00000578681 JMJD8Q96S16 334 aa12.74□□□□□ -0.37
DDX42-208ENST00000578681 SIGLEC8Q9NYZ4 499 aa12.74□□□□□ -0.37
DDX42-208ENST00000578681 TSPAN13O95857 204 aa12.74□□□□□ -0.37
DDX42-208ENST00000578681 HBDP02042 147 aa12.74□□□□□ -0.37
DDX42-208ENST00000578681 A0A1B0GXF2 115 aa12.74□□□□□ -0.37
DDX42-208ENST00000578681 A4D1N5 150 aa12.74□□□□□ -0.37
DDX42-208ENST00000578681 KRTAP10-9P60411 292 aa12.73□□□□□ -0.37
DDX42-208ENST00000578681 ZFAND3Q9H8U3 227 aa12.73□□□□□ -0.37
DDX42-208ENST00000578681 SMPXQ9UHP9 88 aa12.73□□□□□ -0.37
DDX42-208ENST00000578681 HECTD1Q9ULT8 2610 aa12.73□□□□□ -0.37
DDX42-208ENST00000578681 OVOL1O14753 267 aa12.73□□□□□ -0.37
DDX42-208ENST00000578681 IFITM1P13164 125 aa12.73□□□□□ -0.37
DDX42-208ENST00000578681 PGPEP1Q9NXJ5 209 aa12.73□□□□□ -0.37
DDX42-208ENST00000578681 DCHS2Q6V1P9 2916 aa12.73□□□□□ -0.37
DDX42-208ENST00000578681 IFI27L1Q96BM0 104 aa12.73□□□□□ -0.37
DDX42-208ENST00000578681 ZNF56Q15929 161 aa12.72□□□□□ -0.37
DDX42-208ENST00000578681 C5orf47Q569G3 176 aa12.72□□□□□ -0.37
DDX42-208ENST00000578681 Q6ZQT7 251 aa12.72□□□□□ -0.37
DDX42-208ENST00000578681 ERG28Q9UKR5 140 aa12.72□□□□□ -0.37
DDX42-208ENST00000578681 TMEM262E9PQX1 116 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms