RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 TTTY13Q9BZ97 58 aa4.08□□□□□ -1.76
VAPA-203ENST00000577539 NXT2Q9NPJ8 142 aaKnown RBP4.08□□□□□ -1.76
VAPA-203ENST00000577539 U3KQK5 164 aa4.08□□□□□ -1.76
VAPA-203ENST00000577539 CSMD1Q96PZ7 3565 aa4.08□□□□□ -1.76
VAPA-203ENST00000577539 TRAV8-2A0A0B4J237 113 aa4.07□□□□□ -1.76
VAPA-203ENST00000577539 GTSCR1Q86UQ5 136 aa4.07□□□□□ -1.76
VAPA-203ENST00000577539 DEFB125Q8N687 156 aa4.07□□□□□ -1.76
VAPA-203ENST00000577539 OR2K2Q8NGT1 345 aa4.07□□□□□ -1.76
VAPA-203ENST00000577539 MYOZ3Q8TDC0 251 aa4.07□□□□□ -1.76
VAPA-203ENST00000577539 TNFRSF18Q9Y5U5 241 aa4.07□□□□□ -1.76
VAPA-203ENST00000577539 FCER1GP30273 86 aa4.07□□□□□ -1.76
VAPA-203ENST00000577539 RNASE4P34096 147 aaKnown RBP4.07□□□□□ -1.76
VAPA-203ENST00000577539 BLCAPP62952 87 aa4.07□□□□□ -1.76
VAPA-203ENST00000577539 PHLDA3Q9Y5J5 127 aa4.07□□□□□ -1.76
VAPA-203ENST00000577539 CD5LO43866 347 aa4.07□□□□□ -1.76
VAPA-203ENST00000577539 SMIM17P0DL12 118 aa4.07□□□□□ -1.76
VAPA-203ENST00000577539 C2orf91Q6ZV80 131 aa4.07□□□□□ -1.76
VAPA-203ENST00000577539 BSNQ9UPA5 3926 aa4.06□□□□□ -1.76
VAPA-203ENST00000577539 TLN2Q9Y4G6 2542 aa4.06□□□□□ -1.76
VAPA-203ENST00000577539 TRAV8-6A0A0B4J262 113 aa4.06□□□□□ -1.76
VAPA-203ENST00000577539 A6NDN8 102 aa4.06□□□□□ -1.76
VAPA-203ENST00000577539 H3BUT2 72 aa4.06□□□□□ -1.76
VAPA-203ENST00000577539 IGKV3-20P01619 116 aa4.06□□□□□ -1.76
VAPA-203ENST00000577539 C9orf139Q6ZV77 190 aa4.06□□□□□ -1.76
VAPA-203ENST00000577539 OR4X2Q8NGF9 303 aa4.06□□□□□ -1.76
VAPA-203ENST00000577539 NPFFR1Q9GZQ6 430 aa4.06□□□□□ -1.76
VAPA-203ENST00000577539 RBAKDNA6NC62 111 aa4.06□□□□□ -1.76
VAPA-203ENST00000577539 CFHR3Q02985 330 aa4.06□□□□□ -1.76
VAPA-203ENST00000577539 ZC2HC1BQ5TFG8 222 aa4.06□□□□□ -1.76
VAPA-203ENST00000577539 C14orf178Q8N769 122 aaPredicted RBP4.06□□□□□ -1.76
VAPA-203ENST00000577539 IL17DQ8TAD2 202 aa4.06□□□□□ -1.76
VAPA-203ENST00000577539 C20orf173Q96LM9 149 aa4.06□□□□□ -1.76
VAPA-203ENST00000577539 FAM223BA6NKX1 122 aa4.06□□□□□ -1.76
VAPA-203ENST00000577539 IGKCP01834 107 aa4.06□□□□□ -1.76
VAPA-203ENST00000577539 PRR9Q5T870 116 aa4.06□□□□□ -1.76
VAPA-203ENST00000577539 COX8CQ7Z4L0 72 aa4.06□□□□□ -1.76
VAPA-203ENST00000577539 FAM223AQ8IWN6 122 aa4.06□□□□□ -1.76
VAPA-203ENST00000577539 Q8N8P6 123 aa4.06□□□□□ -1.76
VAPA-203ENST00000577539 OR1N2Q8NGR9 330 aa4.06□□□□□ -1.76
VAPA-203ENST00000577539 VPS25Q9BRG1 176 aa4.06□□□□□ -1.76
VAPA-203ENST00000577539 RHPN1-AS1Q9BWJ2 59 aa4.06□□□□□ -1.76
VAPA-203ENST00000577539 PTPN13Q12923 2485 aa4.06□□□□□ -1.76
VAPA-203ENST00000577539 IGHV4-30-2A0A087WSY4 118 aa4.05□□□□□ -1.76
VAPA-203ENST00000577539 TRAV21A0A0B4J279 112 aa4.05□□□□□ -1.76
VAPA-203ENST00000577539 ASIPP42127 132 aa4.05□□□□□ -1.76
VAPA-203ENST00000577539 SEC11AP67812 179 aa4.05□□□□□ -1.76
VAPA-203ENST00000577539 HSD52Q0P140 79 aa4.05□□□□□ -1.76
VAPA-203ENST00000577539 LAGE3Q14657 143 aa4.05□□□□□ -1.76
VAPA-203ENST00000577539 MRPL35Q9NZE8 188 aaKnown RBP4.05□□□□□ -1.76
VAPA-203ENST00000577539 ATP5LO75964 103 aa4.05□□□□□ -1.76
VAPA-203ENST00000577539 DPM2O94777 84 aa4.05□□□□□ -1.76
VAPA-203ENST00000577539 ANXA2RQ3ZCQ2 193 aa4.05□□□□□ -1.76
VAPA-203ENST00000577539 LINC01620Q4KN68 170 aa4.05□□□□□ -1.76
VAPA-203ENST00000577539 C9orf47Q6ZRZ4 202 aa4.05□□□□□ -1.76
VAPA-203ENST00000577539 BOD1L2Q8IYS8 172 aa4.05□□□□□ -1.76
VAPA-203ENST00000577539 OR9G4Q8NGQ1 327 aa4.05□□□□□ -1.76
VAPA-203ENST00000577539 LRRK2Q5S007 2527 aa4.05□□□□□ -1.76
VAPA-203ENST00000577539 MYO9AB2RTY4 2548 aa4.05□□□□□ -1.76
VAPA-203ENST00000577539 IGKV2D-26A0A0A0MRZ7 120 aa4.05□□□□□ -1.76
VAPA-203ENST00000577539 K7EP13 123 aa4.05□□□□□ -1.76
VAPA-203ENST00000577539 GNRH2O43555 120 aa4.05□□□□□ -1.76
VAPA-203ENST00000577539 MAPK1IP1LQ8NDC0 245 aa4.05□□□□□ -1.76
VAPA-203ENST00000577539 PIFOQ8TCI5 191 aa4.05□□□□□ -1.76
VAPA-203ENST00000577539 LINC00477Q96M19 166 aa4.05□□□□□ -1.76
VAPA-203ENST00000577539 ABCA2Q9BZC7 2435 aa4.04□□□□□ -1.76
VAPA-203ENST00000577539 IGHV7-4-1A0A0J9YVY3 117 aa4.04□□□□□ -1.76
VAPA-203ENST00000577539 NDUFA4O00483 81 aa4.04□□□□□ -1.76
VAPA-203ENST00000577539 OVOL1O14753 267 aa4.04□□□□□ -1.76
VAPA-203ENST00000577539 FGF6P10767 208 aa4.04□□□□□ -1.76
VAPA-203ENST00000577539 SRSF1Q07955 248 aaKnown RBP eCLIP4.04□□□□□ -1.76
VAPA-203ENST00000577539 ZNF575Q86XF7 245 aa4.04□□□□□ -1.76
VAPA-203ENST00000577539 MRPL53Q96EL3 112 aaKnown RBP4.04□□□□□ -1.76
VAPA-203ENST00000577539 DUX5Q96PT3 197 aa4.04□□□□□ -1.76
VAPA-203ENST00000577539 SCGB3A1Q96QR1 104 aa4.04□□□□□ -1.76
VAPA-203ENST00000577539 CNFNQ9BYD5 112 aa4.04□□□□□ -1.76
VAPA-203ENST00000577539 CENPEQ02224 2701 aa4.04□□□□□ -1.76
VAPA-203ENST00000577539 NAV2Q8IVL1 2488 aa4.04□□□□□ -1.76
VAPA-203ENST00000577539 GAGE12BA1L429 117 aa4.04□□□□□ -1.76
VAPA-203ENST00000577539 GAGE12HA6NDE8 117 aa4.04□□□□□ -1.76
VAPA-203ENST00000577539 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.04□□□□□ -1.76
VAPA-203ENST00000577539 K7EMI3 77 aa4.04□□□□□ -1.76
VAPA-203ENST00000577539 MSMBP08118 114 aa4.04□□□□□ -1.76
VAPA-203ENST00000577539 NEGR1Q7Z3B1 354 aa4.04□□□□□ -1.76
VAPA-203ENST00000577539 RPL39LQ96EH5 51 aaKnown RBP4.04□□□□□ -1.76
VAPA-203ENST00000577539 CSDC2Q9Y534 153 aaKnown RBP4.04□□□□□ -1.76
VAPA-203ENST00000577539 COL12A1Q99715 3063 aa4.04□□□□□ -1.76
VAPA-203ENST00000577539 DOPEY1Q5JWR5 2465 aa4.04□□□□□ -1.76
VAPA-203ENST00000577539 SVEP1Q4LDE5 3571 aa4.04□□□□□ -1.76
VAPA-203ENST00000577539 SONP18583 2426 aaKnown RBP4.04□□□□□ -1.76
VAPA-203ENST00000577539 A0A0G2JLM5 398 aa4.04□□□□□ -1.76
VAPA-203ENST00000577539 ZNF688P0C7X2 276 aa4.04□□□□□ -1.76
VAPA-203ENST00000577539 GTF2H5Q6ZYL4 71 aa4.04□□□□□ -1.76
VAPA-203ENST00000577539 C10orf105Q8TEF2 133 aa4.04□□□□□ -1.76
VAPA-203ENST00000577539 USMG5Q96IX5 58 aa4.04□□□□□ -1.76
VAPA-203ENST00000577539 BBC3Q96PG8 261 aaPredicted RBP4.04□□□□□ -1.76
VAPA-203ENST00000577539 FAM74A4Q5TZK3 123 aa4.03□□□□□ -1.76
VAPA-203ENST00000577539 ZFAND2AQ8N6M9 145 aa4.03□□□□□ -1.76
VAPA-203ENST00000577539 SMIM2Q9BVW6 85 aa4.03□□□□□ -1.76
VAPA-203ENST00000577539 CST9LQ9H4G1 147 aa4.03□□□□□ -1.76
VAPA-203ENST00000577539 NHP2Q9NX24 153 aaKnown RBP4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms