RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 LINC00694P0DN24 101 aa5.84□□□□□ -1.47
SMG6-218ENST00000575454 BTCP35070 178 aa5.84□□□□□ -1.47
SMG6-218ENST00000575454 ZNF506Q5JVG8 444 aa5.84□□□□□ -1.47
SMG6-218ENST00000575454 ATRAIDQ6UW56 229 aa5.84□□□□□ -1.47
SMG6-218ENST00000575454 GOLT1AQ6ZVE7 132 aa5.84□□□□□ -1.47
SMG6-218ENST00000575454 NIT1Q86X76 327 aa5.84□□□□□ -1.47
SMG6-218ENST00000575454 UBE2WQ96B02 151 aa5.84□□□□□ -1.47
SMG6-218ENST00000575454 C9orf85Q96MD7 179 aa5.84□□□□□ -1.47
SMG6-218ENST00000575454 WDR61Q9GZS3 305 aaKnown RBP5.84□□□□□ -1.47
SMG6-218ENST00000575454 MBD2Q9UBB5 411 aa5.84□□□□□ -1.47
SMG6-218ENST00000575454 KLK12Q9UKR0 248 aa5.84□□□□□ -1.47
SMG6-218ENST00000575454 PGPEP1LA6NFU8 196 aa5.83□□□□□ -1.48
SMG6-218ENST00000575454 K7EQM0 130 aa5.83□□□□□ -1.48
SMG6-218ENST00000575454 NHLH2Q02577 135 aa5.83□□□□□ -1.48
SMG6-218ENST00000575454 IL15RAQ13261 267 aa5.83□□□□□ -1.48
SMG6-218ENST00000575454 DGAT2L7PQ6IED9 249 aa5.83□□□□□ -1.48
SMG6-218ENST00000575454 C1orf43Q9BWL3 253 aa5.83□□□□□ -1.48
SMG6-218ENST00000575454 S100A4P26447 101 aaKnown RBP5.82□□□□□ -1.48
SMG6-218ENST00000575454 HNRNPA3P51991 378 aaKnown RBP5.82□□□□□ -1.48
SMG6-218ENST00000575454 LGALSLQ3ZCW2 172 aaPredicted RBP5.82□□□□□ -1.48
SMG6-218ENST00000575454 ZFP69Q49AA0 526 aa5.82□□□□□ -1.48
SMG6-218ENST00000575454 OR2T35Q8NGX2 323 aa5.82□□□□□ -1.48
SMG6-218ENST00000575454 TVP23CQ96ET8 276 aa5.82□□□□□ -1.48
SMG6-218ENST00000575454 ZC2HC1AQ96GY0 325 aa5.82□□□□□ -1.48
SMG6-218ENST00000575454 LINC00479Q96M42 142 aa5.82□□□□□ -1.48
SMG6-218ENST00000575454 PARLQ9H300 379 aa5.82□□□□□ -1.48
SMG6-218ENST00000575454 DPH3P1Q9H4G8 78 aa5.82□□□□□ -1.48
SMG6-218ENST00000575454 OR5AC2Q9NZP5 309 aa5.82□□□□□ -1.48
SMG6-218ENST00000575454 TNXBP22105 4242 aa5.82□□□□□ -1.48
SMG6-218ENST00000575454 CCDC160A6NGH7 325 aa5.81□□□□□ -1.48
SMG6-218ENST00000575454 RHODO00212 210 aa5.81□□□□□ -1.48
SMG6-218ENST00000575454 CRPP02741 224 aa5.81□□□□□ -1.48
SMG6-218ENST00000575454 TCRBP04435 133 aa5.81□□□□□ -1.48
SMG6-218ENST00000575454 SMUG1Q53HV7 270 aa5.81□□□□□ -1.48
SMG6-218ENST00000575454 DMRTA1Q5VZB9 504 aa5.81□□□□□ -1.48
SMG6-218ENST00000575454 PQLC2Q6ZP29 291 aa5.81□□□□□ -1.48
SMG6-218ENST00000575454 SEC22CQ9BRL7 303 aa5.81□□□□□ -1.48
SMG6-218ENST00000575454 FAT4Q6V0I7 4981 aa5.8□□□□□ -1.48
SMG6-218ENST00000575454 TRAV6A0A075B6T7 132 aa5.8□□□□□ -1.48
SMG6-218ENST00000575454 A0A1W2PPV4 95 aa5.8□□□□□ -1.48
SMG6-218ENST00000575454 TMEM262E9PQX1 116 aa5.8□□□□□ -1.48
SMG6-218ENST00000575454 LYRM1O43325 122 aa5.8□□□□□ -1.48
SMG6-218ENST00000575454 GCGP01275 180 aa5.8□□□□□ -1.48
SMG6-218ENST00000575454 RNASE3P12724 160 aaKnown RBP5.8□□□□□ -1.48
SMG6-218ENST00000575454 IL7P13232 177 aa5.8□□□□□ -1.48
SMG6-218ENST00000575454 PKIAP61925 76 aa5.8□□□□□ -1.48
SMG6-218ENST00000575454 C9orf163Q8N9P6 203 aa5.8□□□□□ -1.48
SMG6-218ENST00000575454 OR10G7Q8NGN6 311 aa5.8□□□□□ -1.48
SMG6-218ENST00000575454 OR2G3Q8NGZ4 309 aa5.8□□□□□ -1.48
SMG6-218ENST00000575454 SCGB1C1Q8TD33 95 aa5.8□□□□□ -1.48
SMG6-218ENST00000575454 SAMD10Q9BYL1 202 aa5.8□□□□□ -1.48
SMG6-218ENST00000575454 NUDT15Q9NV35 164 aa5.8□□□□□ -1.48
SMG6-218ENST00000575454 C11orf21Q9P2W6 132 aa5.8□□□□□ -1.48
SMG6-218ENST00000575454 ASIPP42127 132 aa5.79□□□□□ -1.48
SMG6-218ENST00000575454 RPL19P84098 196 aaKnown RBP5.79□□□□□ -1.48
SMG6-218ENST00000575454 SAPCD1Q5SSQ6 148 aa5.79□□□□□ -1.48
SMG6-218ENST00000575454 UFSP1Q6NVU6 142 aa5.79□□□□□ -1.48
SMG6-218ENST00000575454 C14orf178Q8N769 122 aaPredicted RBP5.79□□□□□ -1.48
SMG6-218ENST00000575454 C5orf17Q8NAS9 161 aa5.79□□□□□ -1.48
SMG6-218ENST00000575454 DNAJC30Q96LL9 226 aa5.79□□□□□ -1.48
SMG6-218ENST00000575454 SDHCQ99643 169 aaPredicted RBP5.79□□□□□ -1.48
SMG6-218ENST00000575454 TRBV10-1A0A0K0K1A3 114 aa5.78□□□□□ -1.48
SMG6-218ENST00000575454 USP17L23D6RBM5 183 aa5.78□□□□□ -1.48
SMG6-218ENST00000575454 PLA2G10O15496 165 aa5.78□□□□□ -1.48
SMG6-218ENST00000575454 TCRAP04437 139 aa5.78□□□□□ -1.48
SMG6-218ENST00000575454 H2AFB2P0C5Z0 115 aa5.78□□□□□ -1.48
SMG6-218ENST00000575454 ZNF80P51504 273 aaPredicted RBP5.78□□□□□ -1.48
SMG6-218ENST00000575454 GNG5P63218 68 aa5.78□□□□□ -1.48
SMG6-218ENST00000575454 CYCSP99999 105 aaKnown RBP5.78□□□□□ -1.48
SMG6-218ENST00000575454 MIAQ16674 131 aa5.78□□□□□ -1.48
SMG6-218ENST00000575454 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.78□□□□□ -1.48
SMG6-218ENST00000575454 CLRN3Q8NCR9 226 aa5.78□□□□□ -1.48
SMG6-218ENST00000575454 RBM38Q9H0Z9 239 aaKnown RBP5.78□□□□□ -1.48
SMG6-218ENST00000575454 IL36BQ9NZH7 164 aa5.78□□□□□ -1.48
SMG6-218ENST00000575454 PSG8Q9UQ74 426 aa5.78□□□□□ -1.48
SMG6-218ENST00000575454 PRSS1P07477 247 aa5.77□□□□□ -1.49
SMG6-218ENST00000575454 RPL36AP83881 106 aaKnown RBP5.77□□□□□ -1.49
SMG6-218ENST00000575454 FLI1Q01543 452 aaPredicted RBP5.77□□□□□ -1.49
SMG6-218ENST00000575454 ENHOQ6UWT2 76 aa5.77□□□□□ -1.49
SMG6-218ENST00000575454 SDIM1Q6ZPB5 146 aa5.77□□□□□ -1.49
SMG6-218ENST00000575454 TMEM75Q8N9X5 138 aa5.77□□□□□ -1.49
SMG6-218ENST00000575454 RPL36ALQ969Q0 106 aaKnown RBP5.77□□□□□ -1.49
SMG6-218ENST00000575454 DPH3Q96FX2 82 aa5.77□□□□□ -1.49
SMG6-218ENST00000575454 RNF185Q96GF1 192 aa5.77□□□□□ -1.49
SMG6-218ENST00000575454 SGK494Q96LW2 274 aa5.77□□□□□ -1.49
SMG6-218ENST00000575454 Q9UF83 564 aa5.77□□□□□ -1.49
SMG6-218ENST00000575454 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.77□□□□□ -1.49
SMG6-218ENST00000575454 TRBV7-3A0A075B6L6 115 aa5.76□□□□□ -1.49
SMG6-218ENST00000575454 TRBV6-8A0A0A6YYG3 113 aa5.76□□□□□ -1.49
SMG6-218ENST00000575454 FABP5P3A8MUU1 101 aa5.76□□□□□ -1.49
SMG6-218ENST00000575454 HLA-DQA1P01909 254 aa5.76□□□□□ -1.49
SMG6-218ENST00000575454 CIRBPQ14011 172 aaKnown RBP5.76□□□□□ -1.49
SMG6-218ENST00000575454 LRRC37A5PQ49AS3 106 aa5.76□□□□□ -1.49
SMG6-218ENST00000575454 PRNTQ86SH4 94 aa5.76□□□□□ -1.49
SMG6-218ENST00000575454 C15orf54Q8N8G6 183 aa5.76□□□□□ -1.49
SMG6-218ENST00000575454 OR11H4Q8NGC9 324 aa5.76□□□□□ -1.49
SMG6-218ENST00000575454 EPDR1Q9UM22 224 aa5.76□□□□□ -1.49
SMG6-218ENST00000575454 IGKV3D-20A0A0C4DH25 116 aa5.75□□□□□ -1.49
SMG6-218ENST00000575454 FAM240BA0A1B0GVZ2 78 aa5.75□□□□□ -1.49
SMG6-218ENST00000575454 B4DEV8 164 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms