RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 IGF1P05019 195 aa10.98□□□□□ -0.65
SMG6-215ENST00000574501 TSPEAR-AS2P59090 65 aa10.98□□□□□ -0.65
SMG6-215ENST00000574501 PRR9Q5T870 116 aa10.98□□□□□ -0.65
SMG6-215ENST00000574501 SHISA2Q6UWI4 295 aa10.98□□□□□ -0.65
SMG6-215ENST00000574501 NPBQ8NG41 125 aa10.98□□□□□ -0.65
SMG6-215ENST00000574501 CACNA1BQ00975 2339 aa10.98□□□□□ -0.65
SMG6-215ENST00000574501 IGHV4-4A0A075B6R2 117 aa10.98□□□□□ -0.65
SMG6-215ENST00000574501 SNCGO76070 127 aa10.98□□□□□ -0.65
SMG6-215ENST00000574501 SRD5A1P18405 259 aa10.98□□□□□ -0.65
SMG6-215ENST00000574501 SPTBN2O15020 2390 aa10.98□□□□□ -0.65
SMG6-215ENST00000574501 RNF223E7ERA6 249 aa10.97□□□□□ -0.65
SMG6-215ENST00000574501 DPM3Q9P2X0 92 aa10.97□□□□□ -0.65
SMG6-215ENST00000574501 PRO1854Q9UHT4 67 aa10.97□□□□□ -0.65
SMG6-215ENST00000574501 E7EQL1 145 aa10.97□□□□□ -0.65
SMG6-215ENST00000574501 PIEZO2Q9H5I5 2752 aa10.97□□□□□ -0.65
SMG6-215ENST00000574501 IGLV4-69A0A075B6H9 119 aa10.96□□□□□ -0.65
SMG6-215ENST00000574501 CFAP161Q6P656 301 aa10.96□□□□□ -0.65
SMG6-215ENST00000574501 A0A0G2JNJ9 132 aa10.96□□□□□ -0.66
SMG6-215ENST00000574501 TRBV7-9A0A0J9YWB2 115 aa10.96□□□□□ -0.66
SMG6-215ENST00000574501 GAGE12JA6NER3 117 aa10.96□□□□□ -0.66
SMG6-215ENST00000574501 GAGE7O76087 117 aa10.96□□□□□ -0.66
SMG6-215ENST00000574501 TSHBP01222 138 aa10.96□□□□□ -0.66
SMG6-215ENST00000574501 CLEC3BP05452 202 aa10.96□□□□□ -0.66
SMG6-215ENST00000574501 GAGE12FP0CL80 117 aa10.96□□□□□ -0.66
SMG6-215ENST00000574501 GAGE12GP0CL81 117 aa10.96□□□□□ -0.66
SMG6-215ENST00000574501 GAGE12IP0CL82 117 aa10.96□□□□□ -0.66
SMG6-215ENST00000574501 HERV-K104P63124 156 aa10.96□□□□□ -0.66
SMG6-215ENST00000574501 GAGE4Q13068 117 aa10.96□□□□□ -0.66
SMG6-215ENST00000574501 TTC32Q5I0X7 151 aa10.96□□□□□ -0.66
SMG6-215ENST00000574501 Q9UFV3 132 aa10.96□□□□□ -0.66
SMG6-215ENST00000574501 TMEM170BQ5T4T1 132 aa10.95□□□□□ -0.66
SMG6-215ENST00000574501 SMIM20Q8N5G0 67 aa10.95□□□□□ -0.66
SMG6-215ENST00000574501 NTN5Q8WTR8 489 aaPredicted RBP10.95□□□□□ -0.66
SMG6-215ENST00000574501 SCGB2A1O75556 95 aa10.95□□□□□ -0.66
SMG6-215ENST00000574501 HERVK_113P61574 105 aa10.95□□□□□ -0.66
SMG6-215ENST00000574501 C15orf32Q32M92 178 aa10.95□□□□□ -0.66
SMG6-215ENST00000574501 SLC25A29Q8N8R3 303 aa10.95□□□□□ -0.66
SMG6-215ENST00000574501 ZFAND3Q9H8U3 227 aa10.95□□□□□ -0.66
SMG6-215ENST00000574501 IFITM1P13164 125 aa10.94□□□□□ -0.66
SMG6-215ENST00000574501 S100A4P26447 101 aaKnown RBP10.94□□□□□ -0.66
SMG6-215ENST00000574501 ARL3P36405 182 aa10.94□□□□□ -0.66
SMG6-215ENST00000574501 PIEZO1Q92508 2521 aa10.94□□□□□ -0.66
SMG6-215ENST00000574501 EIF4EBP3O60516 100 aaPredicted RBP10.94□□□□□ -0.66
SMG6-215ENST00000574501 ELANEP08246 267 aa10.94□□□□□ -0.66
SMG6-215ENST00000574501 Q8N1Y9 231 aa10.94□□□□□ -0.66
SMG6-215ENST00000574501 DPH3P1Q9H4G8 78 aa10.94□□□□□ -0.66
SMG6-215ENST00000574501 TP53TG1Q9Y2A0 90 aa10.94□□□□□ -0.66
SMG6-215ENST00000574501 CLPSL1A2RUU4 121 aa10.93□□□□□ -0.66
SMG6-215ENST00000574501 A4D1N5 150 aa10.93□□□□□ -0.66
SMG6-215ENST00000574501 RPL39P62891 51 aaKnown RBP10.93□□□□□ -0.66
SMG6-215ENST00000574501 C1orf122Q6ZSJ8 110 aa10.93□□□□□ -0.66
SMG6-215ENST00000574501 PHLDA3Q9Y5J5 127 aa10.93□□□□□ -0.66
SMG6-215ENST00000574501 TEX49A0A1B0GTD5 131 aa10.93□□□□□ -0.66
SMG6-215ENST00000574501 TIMD4Q96H15 378 aa10.93□□□□□ -0.66
SMG6-215ENST00000574501 ABCA4P78363 2273 aa10.92□□□□□ -0.66
SMG6-215ENST00000574501 APC2O95996 2303 aa10.92□□□□□ -0.66
SMG6-215ENST00000574501 IGHV4-39P01824 125 aa10.92□□□□□ -0.66
SMG6-215ENST00000574501 ASIPP42127 132 aa10.92□□□□□ -0.66
SMG6-215ENST00000574501 DEFB1P60022 68 aa10.92□□□□□ -0.66
SMG6-215ENST00000574501 RPL32P62910 135 aaKnown RBP10.92□□□□□ -0.66
SMG6-215ENST00000574501 FAM159AQ6UWV7 190 aa10.92□□□□□ -0.66
SMG6-215ENST00000574501 CLEC19AQ6UXS0 136 aa10.92□□□□□ -0.66
SMG6-215ENST00000574501 C9orf47Q6ZRZ4 202 aa10.92□□□□□ -0.66
SMG6-215ENST00000574501 ZNRF2Q8NHG8 242 aa10.92□□□□□ -0.66
SMG6-215ENST00000574501 BEX4Q9NWD9 120 aaPredicted RBP10.92□□□□□ -0.66
SMG6-215ENST00000574501 ECSCRQ19T08 205 aa10.91□□□□□ -0.66
SMG6-215ENST00000574501 GPHB5Q86YW7 130 aa10.91□□□□□ -0.66
SMG6-215ENST00000574501 DEFB124Q8NES8 71 aa10.91□□□□□ -0.66
SMG6-215ENST00000574501 FAM57AQ8TBR7 257 aa10.91□□□□□ -0.66
SMG6-215ENST00000574501 SPTBN4Q9H254 2564 aa10.91□□□□□ -0.66
SMG6-215ENST00000574501 LY6HO94772 140 aa10.9□□□□□ -0.66
SMG6-215ENST00000574501 IGHV3-33P01772 117 aa10.9□□□□□ -0.66
SMG6-215ENST00000574501 PMVKQ15126 192 aa10.9□□□□□ -0.66
SMG6-215ENST00000574501 PIP4P1Q86T03 277 aa10.9□□□□□ -0.66
SMG6-215ENST00000574501 AMELXQ99217 191 aa10.9□□□□□ -0.66
SMG6-215ENST00000574501 IGHV7-81A0A0B4J1V7 117 aa10.9□□□□□ -0.66
SMG6-215ENST00000574501 TRAV2A0A0B4J234 112 aa10.9□□□□□ -0.66
SMG6-215ENST00000574501 J3QQQ9 107 aa10.9□□□□□ -0.66
SMG6-215ENST00000574501 Q1RN00 199 aa10.9□□□□□ -0.66
SMG6-215ENST00000574501 C16orf92Q96LL3 132 aa10.9□□□□□ -0.66
SMG6-215ENST00000574501 IGIPA6NJ69 53 aa10.89□□□□□ -0.67
SMG6-215ENST00000574501 GNRH2O43555 120 aa10.89□□□□□ -0.67
SMG6-215ENST00000574501 ODF3Q96PU9 254 aa10.89□□□□□ -0.67
SMG6-215ENST00000574501 IGHV3-64A0A075B6Q5 118 aa10.89□□□□□ -0.67
SMG6-215ENST00000574501 CENPVL3A0A0U1RRI6 287 aa10.89□□□□□ -0.67
SMG6-215ENST00000574501 LGALS3P17931 250 aaKnown RBP10.89□□□□□ -0.67
SMG6-215ENST00000574501 C15orf53Q8NAA6 179 aa10.89□□□□□ -0.67
SMG6-215ENST00000574501 TMEM263Q8WUH6 116 aaKnown RBP10.89□□□□□ -0.67
SMG6-215ENST00000574501 C20orf173Q96LM9 149 aa10.89□□□□□ -0.67
SMG6-215ENST00000574501 FAM110AQ9BQ89 295 aa10.89□□□□□ -0.67
SMG6-215ENST00000574501 TRAV8-4A0A0B4J246 113 aa10.88□□□□□ -0.67
SMG6-215ENST00000574501 PAPPA-AS1Q5QFB9 102 aa10.88□□□□□ -0.67
SMG6-215ENST00000574501 MUSTN1Q8IVN3 82 aa10.88□□□□□ -0.67
SMG6-215ENST00000574501 LINC01620Q4KN68 170 aa10.87□□□□□ -0.67
SMG6-215ENST00000574501 CCDC140Q96MF4 163 aa10.87□□□□□ -0.67
SMG6-215ENST00000574501 LY6G5BQ8NDX9 201 aa10.87□□□□□ -0.67
SMG6-215ENST00000574501 METTL26Q96S19 204 aa10.87□□□□□ -0.67
SMG6-215ENST00000574501 MED13LQ71F56 2210 aa10.86□□□□□ -0.67
SMG6-215ENST00000574501 ZFAND2AQ8N6M9 145 aa10.86□□□□□ -0.67
SMG6-215ENST00000574501 C3orf56Q8N813 242 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms