RNA–Protein interactions for RNA: ENST00000574121.1

CCNE1-204, Transcript of cyclin E1, humanhuman

TSL 2

Gene CCNE1, Length 1,295 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-204ENST00000574121 OR2D3Q8NGH3 330 aa11.11□□□□□ -0.63
CCNE1-204ENST00000574121 NUDT11Q96G61 164 aa11.11□□□□□ -0.63
CCNE1-204ENST00000574121 SCRT2Q9NQ03 307 aa11.11□□□□□ -0.63
CCNE1-204ENST00000574121 NAT8Q9UHE5 227 aa11.11□□□□□ -0.63
CCNE1-204ENST00000574121 GRIFINA4D1Z8 144 aa11.1□□□□□ -0.63
CCNE1-204ENST00000574121 H3BVH4 76 aa11.1□□□□□ -0.63
CCNE1-204ENST00000574121 OR5AL1P0C617 328 aa11.1□□□□□ -0.63
CCNE1-204ENST00000574121 RPL19P84098 196 aaKnown RBP11.1□□□□□ -0.63
CCNE1-204ENST00000574121 CIDEAO60543 219 aa11.09□□□□□ -0.63
CCNE1-204ENST00000574121 SFTA3P0C7M3 94 aa11.09□□□□□ -0.63
CCNE1-204ENST00000574121 HTN3P15516 51 aa11.09□□□□□ -0.63
CCNE1-204ENST00000574121 SYT8Q8NBV8 401 aa11.09□□□□□ -0.63
CCNE1-204ENST00000574121 SSBP4Q9BWG4 385 aaPredicted RBP11.09□□□□□ -0.63
CCNE1-204ENST00000574121 RPP21Q9H633 154 aaKnown RBP11.09□□□□□ -0.63
CCNE1-204ENST00000574121 PHLDA3Q9Y5J5 127 aa11.09□□□□□ -0.63
CCNE1-204ENST00000574121 TRAV4A0A0B4J268 109 aa11.08□□□□□ -0.64
CCNE1-204ENST00000574121 LINC00862A6NCI5 91 aa11.08□□□□□ -0.64
CCNE1-204ENST00000574121 F5H768 121 aa11.08□□□□□ -0.64
CCNE1-204ENST00000574121 SNAI2O43623 268 aa11.08□□□□□ -0.64
CCNE1-204ENST00000574121 ERVFC1-1P60608 527 aa11.08□□□□□ -0.64
CCNE1-204ENST00000574121 CT83Q5H943 113 aa11.08□□□□□ -0.64
CCNE1-204ENST00000574121 ZFP82Q8N141 532 aa11.08□□□□□ -0.64
CCNE1-204ENST00000574121 RNASE7Q9H1E1 156 aaKnown RBP11.08□□□□□ -0.64
CCNE1-204ENST00000574121 A0A1W2PPQ1 181 aa11.07□□□□□ -0.64
CCNE1-204ENST00000574121 A8MWV9 139 aa11.07□□□□□ -0.64
CCNE1-204ENST00000574121 IGLL5B9A064 214 aa11.07□□□□□ -0.64
CCNE1-204ENST00000574121 RPL23P62829 140 aaKnown RBP11.07□□□□□ -0.64
CCNE1-204ENST00000574121 SLAQ13239 276 aa11.07□□□□□ -0.64
CCNE1-204ENST00000574121 ISOC2Q96AB3 205 aa11.07□□□□□ -0.64
CCNE1-204ENST00000574121 OSTCQ9NRP0 149 aa11.07□□□□□ -0.64
CCNE1-204ENST00000574121 F2Z2F3 143 aa11.06□□□□□ -0.64
CCNE1-204ENST00000574121 GATCO43716 136 aaKnown RBP11.06□□□□□ -0.64
CCNE1-204ENST00000574121 NXPH4O95158 308 aa11.06□□□□□ -0.64
CCNE1-204ENST00000574121 IGLC6P0CF74 106 aa11.06□□□□□ -0.64
CCNE1-204ENST00000574121 COMMD7Q86VX2 200 aa11.06□□□□□ -0.64
CCNE1-204ENST00000574121 C15orf54Q8N8G6 183 aa11.06□□□□□ -0.64
CCNE1-204ENST00000574121 FER1L6-AS1Q8NA97 138 aa11.06□□□□□ -0.64
CCNE1-204ENST00000574121 OR4C5Q8NGB2 326 aa11.06□□□□□ -0.64
CCNE1-204ENST00000574121 IGHV4-4A0A075B6R2 117 aa11.05□□□□□ -0.64
CCNE1-204ENST00000574121 A8MWL6 223 aa11.05□□□□□ -0.64
CCNE1-204ENST00000574121 H3BNG1 76 aa11.05□□□□□ -0.64
CCNE1-204ENST00000574121 RS1O15537 224 aa11.05□□□□□ -0.64
CCNE1-204ENST00000574121 HOXA5P20719 270 aa11.05□□□□□ -0.64
CCNE1-204ENST00000574121 PNRC1Q12796 327 aaPredicted RBP11.05□□□□□ -0.64
CCNE1-204ENST00000574121 ADIRFQ15847 76 aa11.05□□□□□ -0.64
CCNE1-204ENST00000574121 DMRTA1Q5VZB9 504 aa11.05□□□□□ -0.64
CCNE1-204ENST00000574121 POM121L12Q8N7R1 296 aa11.05□□□□□ -0.64
CCNE1-204ENST00000574121 C15orf53Q8NAA6 179 aa11.05□□□□□ -0.64
CCNE1-204ENST00000574121 M0R381 172 aa11.04□□□□□ -0.64
CCNE1-204ENST00000574121 CFAP126Q5VTH2 177 aa11.04□□□□□ -0.64
CCNE1-204ENST00000574121 TMEM88Q6PEY1 159 aa11.04□□□□□ -0.64
CCNE1-204ENST00000574121 ZFP2Q6ZN57 461 aa11.04□□□□□ -0.64
CCNE1-204ENST00000574121 SFRP2Q96HF1 295 aa11.04□□□□□ -0.64
CCNE1-204ENST00000574121 ZNF479Q96JC4 524 aa11.04□□□□□ -0.64
CCNE1-204ENST00000574121 PRO0255Q9UI72 69 aa11.04□□□□□ -0.64
CCNE1-204ENST00000574121 TRGV4A0A0C4DH28 118 aa11.03□□□□□ -0.64
CCNE1-204ENST00000574121 TMEM218A2RU14 115 aa11.03□□□□□ -0.64
CCNE1-204ENST00000574121 FAM231BA6NCW3 169 aa11.03□□□□□ -0.64
CCNE1-204ENST00000574121 IGHV3-53P01767 116 aa11.03□□□□□ -0.64
CCNE1-204ENST00000574121 GZMBP10144 247 aa11.03□□□□□ -0.64
CCNE1-204ENST00000574121 CTRLP40313 264 aa11.03□□□□□ -0.64
CCNE1-204ENST00000574121 CACNG7P62955 275 aa11.03□□□□□ -0.64
CCNE1-204ENST00000574121 FHL2Q14192 279 aa11.03□□□□□ -0.64
CCNE1-204ENST00000574121 SPANXN1Q5VSR9 72 aa11.03□□□□□ -0.64
CCNE1-204ENST00000574121 WDR73Q6P4I2 378 aa11.03□□□□□ -0.64
CCNE1-204ENST00000574121 OR10AG1Q8NH19 301 aa11.03□□□□□ -0.64
CCNE1-204ENST00000574121 GFRA4Q9GZZ7 299 aa11.03□□□□□ -0.64
CCNE1-204ENST00000574121 MUC4Q99102 2169 aa11.02□□□□□ -0.65
CCNE1-204ENST00000574121 TRAV26-1A0A087WT03 109 aa11.02□□□□□ -0.65
CCNE1-204ENST00000574121 RHODO00212 210 aa11.02□□□□□ -0.65
CCNE1-204ENST00000574121 FOXA3P55318 350 aaPredicted RBP11.02□□□□□ -0.65
CCNE1-204ENST00000574121 OR10G8Q8NGN5 311 aa11.02□□□□□ -0.65
CCNE1-204ENST00000574121 TSKUQ8WUA8 353 aa11.02□□□□□ -0.65
CCNE1-204ENST00000574121 TPPP3Q9BW30 176 aa11.02□□□□□ -0.65
CCNE1-204ENST00000574121 APLNQ9ULZ1 77 aa11.02□□□□□ -0.65
CCNE1-204ENST00000574121 HHLA3Q9XRX5 114 aa11.02□□□□□ -0.65
CCNE1-204ENST00000574121 CNFNQ9BYD5 112 aa11.01□□□□□ -0.65
CCNE1-204ENST00000574121 V9GYV3 84 aa11.01□□□□□ -0.65
CCNE1-204ENST00000574121 GATA1P15976 413 aaPredicted RBP11□□□□□ -0.65
CCNE1-204ENST00000574121 CRYBA4P53673 196 aa11□□□□□ -0.65
CCNE1-204ENST00000574121 UFSP1Q6NVU6 142 aa11□□□□□ -0.65
CCNE1-204ENST00000574121 LYZL1Q6UWQ5 148 aa11□□□□□ -0.65
CCNE1-204ENST00000574121 GTSF1Q8WW33 167 aa11□□□□□ -0.65
CCNE1-204ENST00000574121 SEC11CQ9BY50 192 aa11□□□□□ -0.65
CCNE1-204ENST00000574121 TRBV6-4A0A1B0GX49 114 aa10.99□□□□□ -0.65
CCNE1-204ENST00000574121 F8W036 122 aa10.99□□□□□ -0.65
CCNE1-204ENST00000574121 PPP1R2P9O14990 202 aa10.99□□□□□ -0.65
CCNE1-204ENST00000574121 PAX4O43316 350 aa10.99□□□□□ -0.65
CCNE1-204ENST00000574121 VSIG2Q96IQ7 327 aa10.99□□□□□ -0.65
CCNE1-204ENST00000574121 AP1S3Q96PC3 154 aa10.99□□□□□ -0.65
CCNE1-204ENST00000574121 A0A0J9YY99 117 aa10.98□□□□□ -0.65
CCNE1-204ENST00000574121 CRYGDP07320 174 aa10.98□□□□□ -0.65
CCNE1-204ENST00000574121 ADCYAP1P18509 176 aa10.98□□□□□ -0.65
CCNE1-204ENST00000574121 JPT2Q9H910 190 aa10.98□□□□□ -0.65
CCNE1-204ENST00000574121 DNAH7Q8WXX0 4024 aa10.97□□□□□ -0.65
CCNE1-204ENST00000574121 MUC21A0A0G2JKD1 596 aa10.97□□□□□ -0.65
CCNE1-204ENST00000574121 MUC21A0A140T8X8 626 aa10.97□□□□□ -0.65
CCNE1-204ENST00000574121 HIGD1CA8MV81 97 aa10.97□□□□□ -0.65
CCNE1-204ENST00000574121 TRGC1P0CF51 173 aa10.97□□□□□ -0.65
CCNE1-204ENST00000574121 NTF3P20783 257 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms