RNA–Protein interactions for RNA: ENST00000574099.1

CCDC40-211, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-211ENST00000574099 TCRBP04435 133 aa11.36□□□□□ -0.59
CCDC40-211ENST00000574099 ZNF80P51504 273 aaPredicted RBP11.36□□□□□ -0.59
CCDC40-211ENST00000574099 FAM74A1Q5RGS3 127 aa11.36□□□□□ -0.59
CCDC40-211ENST00000574099 CYB561D1Q8N8Q1 229 aa11.36□□□□□ -0.59
CCDC40-211ENST00000574099 OR2T35Q8NGX2 323 aa11.36□□□□□ -0.59
CCDC40-211ENST00000574099 SAMD10Q9BYL1 202 aa11.36□□□□□ -0.59
CCDC40-211ENST00000574099 PARLQ9H300 379 aa11.36□□□□□ -0.59
CCDC40-211ENST00000574099 MBD2Q9UBB5 411 aa11.36□□□□□ -0.59
CCDC40-211ENST00000574099 PLA2G10O15496 165 aa11.35□□□□□ -0.59
CCDC40-211ENST00000574099 LYRM1O43325 122 aa11.35□□□□□ -0.59
CCDC40-211ENST00000574099 TAS2R45P59539 299 aa11.35□□□□□ -0.59
CCDC40-211ENST00000574099 NIT1Q86X76 327 aa11.35□□□□□ -0.59
CCDC40-211ENST00000574099 A0A087WWC5 75 aa11.34□□□□□ -0.59
CCDC40-211ENST00000574099 RNASE3P12724 160 aaKnown RBP11.34□□□□□ -0.59
CCDC40-211ENST00000574099 LRRC37A5PQ49AS3 106 aa11.34□□□□□ -0.59
CCDC40-211ENST00000574099 C14orf178Q8N769 122 aaPredicted RBP11.34□□□□□ -0.59
CCDC40-211ENST00000574099 NDFIP1Q9BT67 221 aa11.34□□□□□ -0.59
CCDC40-211ENST00000574099 OR5AC2Q9NZP5 309 aa11.34□□□□□ -0.59
CCDC40-211ENST00000574099 LRP2P98164 4655 aa11.32□□□□□ -0.6
CCDC40-211ENST00000574099 TAAR5O14804 337 aa11.32□□□□□ -0.6
CCDC40-211ENST00000574099 GCGP01275 180 aa11.32□□□□□ -0.6
CCDC40-211ENST00000574099 SEC11BP0C7V7 166 aa11.32□□□□□ -0.6
CCDC40-211ENST00000574099 LGALSLQ3ZCW2 172 aaPredicted RBP11.32□□□□□ -0.6
CCDC40-211ENST00000574099 A0A087WX48 190 aa11.31□□□□□ -0.6
CCDC40-211ENST00000574099 SIX6O95475 246 aa11.31□□□□□ -0.6
CCDC40-211ENST00000574099 H2AFB2P0C5Z0 115 aa11.31□□□□□ -0.6
CCDC40-211ENST00000574099 C14orf177Q52M58 125 aa11.31□□□□□ -0.6
CCDC40-211ENST00000574099 ZFP2Q6ZN57 461 aa11.31□□□□□ -0.6
CCDC40-211ENST00000574099 PTH2Q96A98 100 aa11.31□□□□□ -0.6
CCDC40-211ENST00000574099 LINC00479Q96M42 142 aa11.31□□□□□ -0.6
CCDC40-211ENST00000574099 JPT2Q9H910 190 aa11.31□□□□□ -0.6
CCDC40-211ENST00000574099 A8MWV9 139 aa11.3□□□□□ -0.6
CCDC40-211ENST00000574099 HMGB3O15347 200 aaKnown RBP11.3□□□□□ -0.6
CCDC40-211ENST00000574099 FGF8P55075 233 aaPredicted RBP11.3□□□□□ -0.6
CCDC40-211ENST00000574099 RNF213Q63HN8 5207 aa11.3□□□□□ -0.6
CCDC40-211ENST00000574099 H0YIZ8 118 aa11.29□□□□□ -0.6
CCDC40-211ENST00000574099 ATRAIDQ6UW56 229 aa11.29□□□□□ -0.6
CCDC40-211ENST00000574099 C1orf43Q9BWL3 253 aa11.29□□□□□ -0.6
CCDC40-211ENST00000574099 RBM38Q9H0Z9 239 aaKnown RBP11.29□□□□□ -0.6
CCDC40-211ENST00000574099 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.29□□□□□ -0.6
CCDC40-211ENST00000574099 S100A4P26447 101 aaKnown RBP11.28□□□□□ -0.6
CCDC40-211ENST00000574099 ZFP69Q49AA0 526 aa11.28□□□□□ -0.6
CCDC40-211ENST00000574099 DMRTA1Q5VZB9 504 aa11.28□□□□□ -0.6
CCDC40-211ENST00000574099 KCNIP4Q6PIL6 250 aa11.28□□□□□ -0.6
CCDC40-211ENST00000574099 ARL6IP6Q8N6S5 226 aa11.28□□□□□ -0.6
CCDC40-211ENST00000574099 SMIM3Q9BZL3 60 aa11.28□□□□□ -0.6
CCDC40-211ENST00000574099 PANO1I0J062 215 aa11.27□□□□□ -0.61
CCDC40-211ENST00000574099 HLA-DQA1P01909 254 aa11.27□□□□□ -0.61
CCDC40-211ENST00000574099 ELOBQ15370 118 aa11.27□□□□□ -0.61
CCDC40-211ENST00000574099 SMUG1Q53HV7 270 aa11.27□□□□□ -0.61
CCDC40-211ENST00000574099 UFSP1Q6NVU6 142 aa11.27□□□□□ -0.61
CCDC40-211ENST00000574099 PQLC2Q6ZP29 291 aa11.27□□□□□ -0.61
CCDC40-211ENST00000574099 Q6ZRU5 148 aa11.27□□□□□ -0.61
CCDC40-211ENST00000574099 PSG8Q9UQ74 426 aa11.27□□□□□ -0.61
CCDC40-211ENST00000574099 A0A1W2PPV4 95 aa11.26□□□□□ -0.61
CCDC40-211ENST00000574099 USP17L23D6RBM5 183 aa11.26□□□□□ -0.61
CCDC40-211ENST00000574099 TCRAP04437 139 aa11.26□□□□□ -0.61
CCDC40-211ENST00000574099 ASIPP42127 132 aa11.26□□□□□ -0.61
CCDC40-211ENST00000574099 Q0VG73 95 aa11.26□□□□□ -0.61
CCDC40-211ENST00000574099 FAM74A4Q5TZK3 123 aa11.26□□□□□ -0.61
CCDC40-211ENST00000574099 PRNTQ86SH4 94 aa11.26□□□□□ -0.61
CCDC40-211ENST00000574099 OR10G9Q8NGN4 311 aa11.26□□□□□ -0.61
CCDC40-211ENST00000574099 OR2G3Q8NGZ4 309 aa11.26□□□□□ -0.61
CCDC40-211ENST00000574099 SCGB1C1Q8TD33 95 aa11.26□□□□□ -0.61
CCDC40-211ENST00000574099 CRPP02741 224 aa11.25□□□□□ -0.61
CCDC40-211ENST00000574099 RAB2AP61019 212 aa11.25□□□□□ -0.61
CCDC40-211ENST00000574099 CHCHD7Q9BUK0 85 aa11.25□□□□□ -0.61
CCDC40-211ENST00000574099 IGKV3D-20A0A0C4DH25 116 aa11.24□□□□□ -0.61
CCDC40-211ENST00000574099 SERTM2A0A1B0GWG4 89 aa11.24□□□□□ -0.61
CCDC40-211ENST00000574099 TMEM262E9PQX1 116 aa11.24□□□□□ -0.61
CCDC40-211ENST00000574099 K7EQM0 130 aa11.24□□□□□ -0.61
CCDC40-211ENST00000574099 PRSS1P07477 247 aa11.24□□□□□ -0.61
CCDC40-211ENST00000574099 ARL14EPLP0DKL9 152 aa11.24□□□□□ -0.61
CCDC40-211ENST00000574099 FLI1Q01543 452 aaPredicted RBP11.24□□□□□ -0.61
CCDC40-211ENST00000574099 ENHOQ6UWT2 76 aa11.24□□□□□ -0.61
CCDC40-211ENST00000574099 C15orf54Q8N8G6 183 aa11.24□□□□□ -0.61
CCDC40-211ENST00000574099 C5orf17Q8NAS9 161 aa11.24□□□□□ -0.61
CCDC40-211ENST00000574099 HSPB11Q9Y547 144 aa11.24□□□□□ -0.61
CCDC40-211ENST00000574099 TNXBP22105 4242 aa11.24□□□□□ -0.61
CCDC40-211ENST00000574099 H3BVH4 76 aa11.23□□□□□ -0.61
CCDC40-211ENST00000574099 ZC2HC1AQ96GY0 325 aa11.23□□□□□ -0.61
CCDC40-211ENST00000574099 A0A087WWL8 130 aa11.22□□□□□ -0.61
CCDC40-211ENST00000574099 A0A0D9SG52 128 aa11.22□□□□□ -0.61
CCDC40-211ENST00000574099 FAM240BA0A1B0GVZ2 78 aa11.22□□□□□ -0.61
CCDC40-211ENST00000574099 RHODO00212 210 aa11.22□□□□□ -0.61
CCDC40-211ENST00000574099 PIK3CD-AS1Q5SR53 167 aa11.22□□□□□ -0.61
CCDC40-211ENST00000574099 C9orf163Q8N9P6 203 aa11.22□□□□□ -0.61
CCDC40-211ENST00000574099 OR10G7Q8NGN6 311 aa11.22□□□□□ -0.61
CCDC40-211ENST00000574099 ODF1Q14990 250 aa11.21□□□□□ -0.61
CCDC40-211ENST00000574099 ANGP03950 147 aaKnown RBP11.2□□□□□ -0.62
CCDC40-211ENST00000574099 MPV17L2Q567V2 206 aa11.2□□□□□ -0.62
CCDC40-211ENST00000574099 IL36BQ9NZH7 164 aa11.2□□□□□ -0.62
CCDC40-211ENST00000574099 RPL36AP83881 106 aaKnown RBP11.19□□□□□ -0.62
CCDC40-211ENST00000574099 DGAT2L7PQ6IED9 249 aa11.19□□□□□ -0.62
CCDC40-211ENST00000574099 CLPSL2Q6UWE3 100 aa11.19□□□□□ -0.62
CCDC40-211ENST00000574099 PPP1R1CQ8WVI7 109 aa11.19□□□□□ -0.62
CCDC40-211ENST00000574099 RPL36ALQ969Q0 106 aaKnown RBP11.19□□□□□ -0.62
CCDC40-211ENST00000574099 WFDC1Q9HC57 220 aa11.19□□□□□ -0.62
CCDC40-211ENST00000574099 TRAV34A0A0B4J273 112 aa11.18□□□□□ -0.62
CCDC40-211ENST00000574099 B4DEV8 164 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms