RNA–Protein interactions for RNA: ENST00000573955.1

USP43-204, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 2,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-204ENST00000573955 J3QKU1 62 aa12.28□□□□□ -0.44
USP43-204ENST00000573955 PCP2Q8IVA1 136 aa12.28□□□□□ -0.44
USP43-204ENST00000573955 LINC01356Q8N9X3 169 aa12.28□□□□□ -0.44
USP43-204ENST00000573955 AAMDCQ9H7C9 122 aa12.28□□□□□ -0.44
USP43-204ENST00000573955 RHODO00212 210 aa12.28□□□□□ -0.44
USP43-204ENST00000573955 HBBP68871 147 aa12.28□□□□□ -0.44
USP43-204ENST00000573955 ZFAND3Q9H8U3 227 aa12.28□□□□□ -0.44
USP43-204ENST00000573955 SMAD5-AS1Q9Y6J3 95 aa12.28□□□□□ -0.44
USP43-204ENST00000573955 A0A096LNT2 108 aa12.27□□□□□ -0.44
USP43-204ENST00000573955 CHEK1O14757 476 aa12.27□□□□□ -0.44
USP43-204ENST00000573955 P01737 135 aa12.27□□□□□ -0.44
USP43-204ENST00000573955 IGHV3-11P01762 117 aa12.27□□□□□ -0.44
USP43-204ENST00000573955 APOHP02749 345 aaPredicted RBP12.27□□□□□ -0.44
USP43-204ENST00000573955 RPL7P18124 248 aaKnown RBP12.27□□□□□ -0.44
USP43-204ENST00000573955 SRD5A1P18405 259 aa12.27□□□□□ -0.44
USP43-204ENST00000573955 NF1P21359 2839 aa12.27□□□□□ -0.44
USP43-204ENST00000573955 A0A1B0GXF2 115 aa12.27□□□□□ -0.45
USP43-204ENST00000573955 TTC32Q5I0X7 151 aa12.27□□□□□ -0.45
USP43-204ENST00000573955 NFE4Q86UQ8 179 aa12.27□□□□□ -0.45
USP43-204ENST00000573955 MAP1LC3AQ9H492 121 aa12.27□□□□□ -0.45
USP43-204ENST00000573955 MYO9AB2RTY4 2548 aa12.27□□□□□ -0.45
USP43-204ENST00000573955 SETD2Q9BYW2 2564 aaPredicted RBP12.27□□□□□ -0.45
USP43-204ENST00000573955 IGKV2-40A0A087WW87 121 aaPredicted RBP12.26□□□□□ -0.45
USP43-204ENST00000573955 WIPF1O43516 503 aa12.26□□□□□ -0.45
USP43-204ENST00000573955 IGKV2D-40P01614 121 aaPredicted RBP12.26□□□□□ -0.45
USP43-204ENST00000573955 TRBV12-3P01733 135 aa12.26□□□□□ -0.45
USP43-204ENST00000573955 DEFB112Q30KQ8 113 aa12.26□□□□□ -0.45
USP43-204ENST00000573955 RPP21Q9H633 154 aaKnown RBP12.26□□□□□ -0.45
USP43-204ENST00000573955 IGHV4-59P01825 116 aa12.26□□□□□ -0.45
USP43-204ENST00000573955 CSN1S1P47710 185 aa12.26□□□□□ -0.45
USP43-204ENST00000573955 GAGE2BQ13066 116 aa12.26□□□□□ -0.45
USP43-204ENST00000573955 GAGE2EQ4V326 116 aa12.26□□□□□ -0.45
USP43-204ENST00000573955 KLK15Q9H2R5 256 aa12.26□□□□□ -0.45
USP43-204ENST00000573955 GAGE2DQ9UEU5 116 aa12.26□□□□□ -0.45
USP43-204ENST00000573955 CR1P17927 2039 aa12.26□□□□□ -0.45
USP43-204ENST00000573955 TRBV7-1A0A0A6YYK4 115 aa12.25□□□□□ -0.45
USP43-204ENST00000573955 C19orf54Q5BKX5 351 aa12.25□□□□□ -0.45
USP43-204ENST00000573955 LYPD1Q8N2G4 141 aa12.25□□□□□ -0.45
USP43-204ENST00000573955 CLPSL1A2RUU4 121 aa12.25□□□□□ -0.45
USP43-204ENST00000573955 ZNF785A8K8V0 405 aa12.25□□□□□ -0.45
USP43-204ENST00000573955 C8orf49Q96NF6 230 aa12.25□□□□□ -0.45
USP43-204ENST00000573955 C19orf71A6NCJ1 209 aa12.24□□□□□ -0.45
USP43-204ENST00000573955 CSN3P07498 182 aa12.24□□□□□ -0.45
USP43-204ENST00000573955 IFITM1P13164 125 aa12.24□□□□□ -0.45
USP43-204ENST00000573955 OR8A1Q8NGG7 326 aa12.24□□□□□ -0.45
USP43-204ENST00000573955 PGLYRP4Q96LB8 373 aa12.24□□□□□ -0.45
USP43-204ENST00000573955 HIGD1BQ9P298 99 aa12.24□□□□□ -0.45
USP43-204ENST00000573955 IGHG2P01859 326 aa12.24□□□□□ -0.45
USP43-204ENST00000573955 PDE6HQ13956 83 aa12.24□□□□□ -0.45
USP43-204ENST00000573955 RNF182Q8N6D2 247 aa12.24□□□□□ -0.45
USP43-204ENST00000573955 TMEM75Q8N9X5 138 aa12.24□□□□□ -0.45
USP43-204ENST00000573955 KIR2DL4Q99706 377 aa12.24□□□□□ -0.45
USP43-204ENST00000573955 CHAC1Q9BUX1 264 aa12.24□□□□□ -0.45
USP43-204ENST00000573955 AP5S1Q9NUS5 200 aa12.24□□□□□ -0.45
USP43-204ENST00000573955 BUB3O43684 328 aa12.24□□□□□ -0.45
USP43-204ENST00000573955 LGALS9BQ3B8N2 356 aa12.24□□□□□ -0.45
USP43-204ENST00000573955 MEIG1Q5JSS6 88 aa12.24□□□□□ -0.45
USP43-204ENST00000573955 LGALS9CQ6DKI2 356 aa12.24□□□□□ -0.45
USP43-204ENST00000573955 FAM159AQ6UWV7 190 aa12.24□□□□□ -0.45
USP43-204ENST00000573955 Q8TAT8 98 aa12.24□□□□□ -0.45
USP43-204ENST00000573955 TMEM126AQ9H061 195 aa12.24□□□□□ -0.45
USP43-204ENST00000573955 AKAP9Q99996 3911 aa12.23□□□□□ -0.45
USP43-204ENST00000573955 NPIPB6E9PJ23 425 aa12.23□□□□□ -0.45
USP43-204ENST00000573955 IGF1P05019 195 aa12.23□□□□□ -0.45
USP43-204ENST00000573955 KLK9Q2XQG4 91 aa12.23□□□□□ -0.45
USP43-204ENST00000573955 PPDPFLQ8WWR9 84 aa12.23□□□□□ -0.45
USP43-204ENST00000573955 PRSS22Q9GZN4 317 aa12.23□□□□□ -0.45
USP43-204ENST00000573955 KLK9Q9UKQ9 250 aa12.23□□□□□ -0.45
USP43-204ENST00000573955 IGHG4P01861 327 aa12.23□□□□□ -0.45
USP43-204ENST00000573955 DEFB113Q30KQ7 82 aa12.23□□□□□ -0.45
USP43-204ENST00000573955 CEND1Q8N111 149 aa12.23□□□□□ -0.45
USP43-204ENST00000573955 Q96MF0 132 aa12.23□□□□□ -0.45
USP43-204ENST00000573955 FAM223BA6NKX1 122 aa12.22□□□□□ -0.45
USP43-204ENST00000573955 TMEM262E9PQX1 116 aa12.22□□□□□ -0.45
USP43-204ENST00000573955 FAM223AQ8IWN6 122 aa12.22□□□□□ -0.45
USP43-204ENST00000573955 TPPP3Q9BW30 176 aa12.22□□□□□ -0.45
USP43-204ENST00000573955 ZNF492Q9P255 531 aa12.22□□□□□ -0.45
USP43-204ENST00000573955 SMIM9A6NGZ8 99 aa12.22□□□□□ -0.45
USP43-204ENST00000573955 CFAP126Q5VTH2 177 aa12.22□□□□□ -0.45
USP43-204ENST00000573955 PSMG3-AS1Q96PY0 264 aa12.22□□□□□ -0.45
USP43-204ENST00000573955 METTL26Q96S19 204 aa12.22□□□□□ -0.45
USP43-204ENST00000573955 CRIP2P52943 208 aaPredicted RBP12.21□□□□□ -0.45
USP43-204ENST00000573955 CACNG7P62955 275 aa12.21□□□□□ -0.45
USP43-204ENST00000573955 UNQ9165/PRO28630Q6UXU0 137 aa12.21□□□□□ -0.45
USP43-204ENST00000573955 IGHV4-31P0DP07 118 aa12.21□□□□□ -0.46
USP43-204ENST00000573955 CRIP1P50238 77 aa12.21□□□□□ -0.46
USP43-204ENST00000573955 WFDC11Q8NEX6 87 aa12.21□□□□□ -0.46
USP43-204ENST00000573955 FLNBO75369 2602 aaKnown RBP12.2□□□□□ -0.46
USP43-204ENST00000573955 TMSB15BA0A087X1C1 80 aa12.2□□□□□ -0.46
USP43-204ENST00000573955 RRN3P1Q2M238 152 aa12.2□□□□□ -0.46
USP43-204ENST00000573955 K7EMI3 77 aa12.2□□□□□ -0.46
USP43-204ENST00000573955 SNCGO76070 127 aa12.2□□□□□ -0.46
USP43-204ENST00000573955 ZNF688P0C7X2 276 aa12.2□□□□□ -0.46
USP43-204ENST00000573955 ERCC8Q13216 396 aa12.2□□□□□ -0.46
USP43-204ENST00000573955 C12orf74Q32Q52 190 aa12.2□□□□□ -0.46
USP43-204ENST00000573955 C10orf99Q6UWK7 81 aa12.2□□□□□ -0.46
USP43-204ENST00000573955 IL17RELQ6ZVW7 336 aa12.2□□□□□ -0.46
USP43-204ENST00000573955 PRAC2D3DTV9 90 aa12.19□□□□□ -0.46
USP43-204ENST00000573955 SMCPP49901 116 aaPredicted RBP12.19□□□□□ -0.46
USP43-204ENST00000573955 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms