RNA–Protein interactions for RNA: ENST00000571186.5

CIITA-205, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 1,041 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-205ENST00000571186 SMR3BP02814 79 aaPredicted RBP9.76□□□□□ -0.85
CIITA-205ENST00000571186 PFN1P07737 140 aaKnown RBP9.76□□□□□ -0.85
CIITA-205ENST00000571186 PPT1P50897 306 aa9.76□□□□□ -0.85
CIITA-205ENST00000571186 NKX2-5P52952 324 aaPredicted RBP9.76□□□□□ -0.85
CIITA-205ENST00000571186 KRTAP10-1P60331 282 aa9.76□□□□□ -0.85
CIITA-205ENST00000571186 ZFP69Q49AA0 526 aa9.76□□□□□ -0.85
CIITA-205ENST00000571186 SAPCD1Q5SSQ6 148 aa9.76□□□□□ -0.85
CIITA-205ENST00000571186 SLC51BQ86UW2 128 aa9.76□□□□□ -0.85
CIITA-205ENST00000571186 SDF2L1Q9HCN8 221 aa9.76□□□□□ -0.85
CIITA-205ENST00000571186 ICOSQ9Y6W8 199 aa9.76□□□□□ -0.85
CIITA-205ENST00000571186 VPS13BQ7Z7G8 4022 aa9.76□□□□□ -0.85
CIITA-205ENST00000571186 SCO2A0A1W2PP80 73 aa9.75□□□□□ -0.85
CIITA-205ENST00000571186 FBLL1A6NHQ2 334 aaKnown RBP9.75□□□□□ -0.85
CIITA-205ENST00000571186 DNAH10OSP0CZ25 163 aa9.75□□□□□ -0.85
CIITA-205ENST00000571186 SULT1A2P50226 295 aa9.75□□□□□ -0.85
CIITA-205ENST00000571186 CRIP1P50238 77 aa9.75□□□□□ -0.85
CIITA-205ENST00000571186 NFE4Q86UQ8 179 aa9.75□□□□□ -0.85
CIITA-205ENST00000571186 ZC2HC1AQ96GY0 325 aa9.75□□□□□ -0.85
CIITA-205ENST00000571186 C18orf15Q96N68 181 aa9.75□□□□□ -0.85
CIITA-205ENST00000571186 GNG13Q9P2W3 67 aa9.75□□□□□ -0.85
CIITA-205ENST00000571186 TRAV9-2A0A087WT02 112 aa9.74□□□□□ -0.85
CIITA-205ENST00000571186 A0A087WTM6 91 aa9.74□□□□□ -0.85
CIITA-205ENST00000571186 SFTA3P0C7M3 94 aa9.74□□□□□ -0.85
CIITA-205ENST00000571186 AKR1C3P42330 323 aa9.74□□□□□ -0.85
CIITA-205ENST00000571186 UBE2G1P62253 170 aa9.74□□□□□ -0.85
CIITA-205ENST00000571186 EIF5AL1Q6IS14 154 aaKnown RBP9.74□□□□□ -0.85
CIITA-205ENST00000571186 FMC1Q96HJ9 113 aa9.74□□□□□ -0.85
CIITA-205ENST00000571186 KCNS1Q96KK3 526 aa9.74□□□□□ -0.85
CIITA-205ENST00000571186 SPXQ9BT56 116 aa9.74□□□□□ -0.85
CIITA-205ENST00000571186 MYCBP2O75592 4640 aa9.74□□□□□ -0.85
CIITA-205ENST00000571186 IGKV3D-20A0A0C4DH25 116 aa9.73□□□□□ -0.85
CIITA-205ENST00000571186 RAB5CP51148 216 aa9.73□□□□□ -0.85
CIITA-205ENST00000571186 FHL2Q14192 279 aa9.73□□□□□ -0.85
CIITA-205ENST00000571186 NHLRC2Q8NBF2 726 aa9.73□□□□□ -0.85
CIITA-205ENST00000571186 ZNF479Q96JC4 524 aa9.73□□□□□ -0.85
CIITA-205ENST00000571186 BOLA1Q9Y3E2 137 aa9.73□□□□□ -0.85
CIITA-205ENST00000571186 FABP5P3A8MUU1 101 aa9.72□□□□□ -0.85
CIITA-205ENST00000571186 FAM229AH3BQW9 127 aa9.72□□□□□ -0.85
CIITA-205ENST00000571186 M0R2P5 195 aa9.72□□□□□ -0.85
CIITA-205ENST00000571186 SH2D1AO60880 128 aa9.72□□□□□ -0.85
CIITA-205ENST00000571186 LTAP01374 205 aa9.72□□□□□ -0.85
CIITA-205ENST00000571186 LYPD5Q6UWN5 251 aa9.72□□□□□ -0.85
CIITA-205ENST00000571186 RASL10AQ92737 203 aa9.72□□□□□ -0.85
CIITA-205ENST00000571186 TCEAL7Q9BRU2 100 aa9.72□□□□□ -0.85
CIITA-205ENST00000571186 PRO0255Q9UI72 69 aa9.72□□□□□ -0.85
CIITA-205ENST00000571186 ZFP30Q9Y2G7 519 aa9.72□□□□□ -0.85
CIITA-205ENST00000571186 TRAV1-1A0A0B4J248 108 aa9.71□□□□□ -0.86
CIITA-205ENST00000571186 TRBV6-1A0A0K0K1D8 114 aa9.71□□□□□ -0.86
CIITA-205ENST00000571186 C9JCJ5 164 aa9.71□□□□□ -0.86
CIITA-205ENST00000571186 M0R036 132 aa9.71□□□□□ -0.86
CIITA-205ENST00000571186 RNASE3P12724 160 aaKnown RBP9.71□□□□□ -0.86
CIITA-205ENST00000571186 GCSHP23434 173 aa9.71□□□□□ -0.86
CIITA-205ENST00000571186 MRPL23Q16540 153 aaKnown RBP9.71□□□□□ -0.86
CIITA-205ENST00000571186 ALKAL2Q6UX46 152 aa9.71□□□□□ -0.86
CIITA-205ENST00000571186 HHLA3Q9XRX5 114 aa9.71□□□□□ -0.86
CIITA-205ENST00000571186 LY96Q9Y6Y9 160 aa9.71□□□□□ -0.86
CIITA-205ENST00000571186 PGPEP1LA6NFU8 196 aa9.7□□□□□ -0.86
CIITA-205ENST00000571186 ORM1P02763 201 aa9.7□□□□□ -0.86
CIITA-205ENST00000571186 CRYBA4P53673 196 aa9.7□□□□□ -0.86
CIITA-205ENST00000571186 SLAQ13239 276 aa9.7□□□□□ -0.86
CIITA-205ENST00000571186 COX8CQ7Z4L0 72 aa9.7□□□□□ -0.86
CIITA-205ENST00000571186 C9orf85Q96MD7 179 aa9.7□□□□□ -0.86
CIITA-205ENST00000571186 DERL1Q9BUN8 251 aa9.7□□□□□ -0.86
CIITA-205ENST00000571186 MANBALQ9NQG1 85 aa9.7□□□□□ -0.86
CIITA-205ENST00000571186 MSRB1Q9NZV6 116 aa9.7□□□□□ -0.86
CIITA-205ENST00000571186 TMSB15BA0A087X1C1 80 aa9.69□□□□□ -0.86
CIITA-205ENST00000571186 TRGV4A0A0C4DH28 118 aa9.69□□□□□ -0.86
CIITA-205ENST00000571186 GRIFINA4D1Z8 144 aa9.69□□□□□ -0.86
CIITA-205ENST00000571186 B4DEV8 164 aa9.69□□□□□ -0.86
CIITA-205ENST00000571186 KRBOX1C9JBD0 128 aa9.69□□□□□ -0.86
CIITA-205ENST00000571186 HAMPP81172 84 aa9.69□□□□□ -0.86
CIITA-205ENST00000571186 ZNF876PQ49A33 203 aa9.69□□□□□ -0.86
CIITA-205ENST00000571186 NEGR1Q7Z3B1 354 aa9.69□□□□□ -0.86
CIITA-205ENST00000571186 OR4C5Q8NGB2 326 aa9.69□□□□□ -0.86
CIITA-205ENST00000571186 TRAV4A0A0B4J268 109 aa9.68□□□□□ -0.86
CIITA-205ENST00000571186 EVI2AP22794 236 aa9.68□□□□□ -0.86
CIITA-205ENST00000571186 ZNF674Q2M3X9 581 aa9.68□□□□□ -0.86
CIITA-205ENST00000571186 FAM162BQ5T6X4 162 aa9.68□□□□□ -0.86
CIITA-205ENST00000571186 BAGE2Q86Y30 109 aa9.68□□□□□ -0.86
CIITA-205ENST00000571186 IGHV3-73A0A0B4J1V6 119 aa9.67□□□□□ -0.86
CIITA-205ENST00000571186 TEX46H3BTG2 121 aa9.67□□□□□ -0.86
CIITA-205ENST00000571186 J3QL48 77 aa9.67□□□□□ -0.86
CIITA-205ENST00000571186 S100A9P06702 114 aaKnown RBP9.67□□□□□ -0.86
CIITA-205ENST00000571186 S100A4P26447 101 aaKnown RBP9.67□□□□□ -0.86
CIITA-205ENST00000571186 ASIPP42127 132 aa9.67□□□□□ -0.86
CIITA-205ENST00000571186 RPL35P42766 123 aaKnown RBP9.67□□□□□ -0.86
CIITA-205ENST00000571186 ZNF506Q5JVG8 444 aa9.67□□□□□ -0.86
CIITA-205ENST00000571186 MLST8Q9BVC4 326 aa9.67□□□□□ -0.86
CIITA-205ENST00000571186 LOC100131303A0A0U1RQF7 123 aa9.66□□□□□ -0.86
CIITA-205ENST00000571186 RAB19A4D1S5 217 aa9.66□□□□□ -0.86
CIITA-205ENST00000571186 H3BVH4 76 aa9.66□□□□□ -0.86
CIITA-205ENST00000571186 RS1O15537 224 aa9.66□□□□□ -0.86
CIITA-205ENST00000571186 RPL19P84098 196 aaKnown RBP9.66□□□□□ -0.86
CIITA-205ENST00000571186 CFAP126Q5VTH2 177 aa9.66□□□□□ -0.86
CIITA-205ENST00000571186 Q6ZSN1 163 aa9.66□□□□□ -0.86
CIITA-205ENST00000571186 WFDC10BQ8IUB3 73 aa9.66□□□□□ -0.86
CIITA-205ENST00000571186 C11orf52Q96A22 123 aa9.66□□□□□ -0.86
CIITA-205ENST00000571186 K7EP13 123 aa9.65□□□□□ -0.86
CIITA-205ENST00000571186 ARMS2P0C7Q2 107 aa9.65□□□□□ -0.86
CIITA-205ENST00000571186 BCL2P10415 239 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms