RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 SYT8Q8NBV8 401 aa16.77■□□□□ 0.28
RAB40C-212ENST00000569575 C11orf45Q8TAV5 145 aa16.77■□□□□ 0.28
RAB40C-212ENST00000569575 TSKUQ8WUA8 353 aa16.77■□□□□ 0.28
RAB40C-212ENST00000569575 TMSB15BA0A087X1C1 80 aa16.76■□□□□ 0.27
RAB40C-212ENST00000569575 CIDEAO60543 219 aa16.76■□□□□ 0.27
RAB40C-212ENST00000569575 IGLC6P0CF74 106 aa16.76■□□□□ 0.27
RAB40C-212ENST00000569575 FER1L6-AS1Q8NA97 138 aa16.76■□□□□ 0.27
RAB40C-212ENST00000569575 CTDSP1Q9GZU7 261 aa16.76■□□□□ 0.27
RAB40C-212ENST00000569575 PHLDA3Q9Y5J5 127 aa16.76■□□□□ 0.27
RAB40C-212ENST00000569575 V9GYV3 84 aa16.76■□□□□ 0.27
RAB40C-212ENST00000569575 GRIFINA4D1Z8 144 aa16.75■□□□□ 0.27
RAB40C-212ENST00000569575 DEFB4AO15263 64 aa16.75■□□□□ 0.27
RAB40C-212ENST00000569575 SLC7A5P1Q8MH63 180 aa16.75■□□□□ 0.27
RAB40C-212ENST00000569575 SVBPQ8N300 66 aa16.75■□□□□ 0.27
RAB40C-212ENST00000569575 H3BVH4 76 aa16.74■□□□□ 0.27
RAB40C-212ENST00000569575 CACNG7P62955 275 aa16.74■□□□□ 0.27
RAB40C-212ENST00000569575 ZFP82Q8N141 532 aa16.74■□□□□ 0.27
RAB40C-212ENST00000569575 TENM3Q9P273 2699 aa16.74■□□□□ 0.27
RAB40C-212ENST00000569575 PRKDCP78527 4128 aaKnown RBP16.73■□□□□ 0.27
RAB40C-212ENST00000569575 DAD1P61803 113 aa16.73■□□□□ 0.27
RAB40C-212ENST00000569575 RHEBQ15382 184 aa16.73■□□□□ 0.27
RAB40C-212ENST00000569575 ZNF876PQ49A33 203 aa16.73■□□□□ 0.27
RAB40C-212ENST00000569575 TMEM242Q9NWH2 141 aa16.73■□□□□ 0.27
RAB40C-212ENST00000569575 TRGV1A0A0A0MS02 117 aa16.72■□□□□ 0.27
RAB40C-212ENST00000569575 SNAPINO95295 136 aa16.72■□□□□ 0.27
RAB40C-212ENST00000569575 CNFNQ9BYD5 112 aa16.72■□□□□ 0.27
RAB40C-212ENST00000569575 IGHV4-4A0A075B6R2 117 aa16.71■□□□□ 0.27
RAB40C-212ENST00000569575 CTRLP40313 264 aa16.71■□□□□ 0.27
RAB40C-212ENST00000569575 RNF212Q495C1 297 aa16.71■□□□□ 0.27
RAB40C-212ENST00000569575 IMMP2LQ96T52 175 aa16.71■□□□□ 0.27
RAB40C-212ENST00000569575 NAT8BQ9UHF3 227 aa16.71■□□□□ 0.27
RAB40C-212ENST00000569575 A0A087WWC5 75 aa16.7■□□□□ 0.26
RAB40C-212ENST00000569575 A8MWV9 139 aa16.7■□□□□ 0.26
RAB40C-212ENST00000569575 NXPH4O95158 308 aa16.7■□□□□ 0.26
RAB40C-212ENST00000569575 APOC3P02656 99 aa16.7■□□□□ 0.26
RAB40C-212ENST00000569575 Q6ZTI0 123 aa16.7■□□□□ 0.26
RAB40C-212ENST00000569575 BORCS7Q96B45 105 aa16.7■□□□□ 0.26
RAB40C-212ENST00000569575 TRGV2A0A075B6R0 118 aa16.69■□□□□ 0.26
RAB40C-212ENST00000569575 SMIM27A0A1W2PRY6 76 aa16.69■□□□□ 0.26
RAB40C-212ENST00000569575 SPANXN1Q5VSR9 72 aa16.69■□□□□ 0.26
RAB40C-212ENST00000569575 CLRN3Q8NCR9 226 aa16.69■□□□□ 0.26
RAB40C-212ENST00000569575 CELA1Q9UNI1 258 aa16.69■□□□□ 0.26
RAB40C-212ENST00000569575 MUC4Q99102 2169 aa16.68■□□□□ 0.26
RAB40C-212ENST00000569575 STAB2Q8WWQ8 2551 aa16.68■□□□□ 0.26
RAB40C-212ENST00000569575 DEFB130BP0DP73 79 aa16.68■□□□□ 0.26
RAB40C-212ENST00000569575 DEFB130AP0DP74 79 aa16.68■□□□□ 0.26
RAB40C-212ENST00000569575 GZMBP10144 247 aa16.68■□□□□ 0.26
RAB40C-212ENST00000569575 C12orf74Q32Q52 190 aa16.68■□□□□ 0.26
RAB40C-212ENST00000569575 GTSF1Q8WW33 167 aa16.68■□□□□ 0.26
RAB40C-212ENST00000569575 WWC2-AS2Q96NR7 200 aa16.68■□□□□ 0.26
RAB40C-212ENST00000569575 DNAH9Q9NYC9 4486 aa16.67■□□□□ 0.26
RAB40C-212ENST00000569575 GAGE12BA1L429 117 aa16.67■□□□□ 0.26
RAB40C-212ENST00000569575 HIGD1CA8MV81 97 aa16.67■□□□□ 0.26
RAB40C-212ENST00000569575 GAGE7O76087 117 aa16.67■□□□□ 0.26
RAB40C-212ENST00000569575 ATP5G1P05496 136 aa16.67■□□□□ 0.26
RAB40C-212ENST00000569575 GAGE12FP0CL80 117 aa16.67■□□□□ 0.26
RAB40C-212ENST00000569575 GAGE12GP0CL81 117 aa16.67■□□□□ 0.26
RAB40C-212ENST00000569575 GAGE12IP0CL82 117 aa16.67■□□□□ 0.26
RAB40C-212ENST00000569575 LYZL1Q6UWQ5 148 aa16.67■□□□□ 0.26
RAB40C-212ENST00000569575 MRPL16Q9NX20 251 aaKnown RBP16.67■□□□□ 0.26
RAB40C-212ENST00000569575 COL7A1Q02388 2944 aa16.67■□□□□ 0.26
RAB40C-212ENST00000569575 TRAV4A0A0B4J268 109 aa16.66■□□□□ 0.26
RAB40C-212ENST00000569575 C7orf77A4D0Y5 90 aa16.65■□□□□ 0.26
RAB40C-212ENST00000569575 SLAQ13239 276 aa16.65■□□□□ 0.26
RAB40C-212ENST00000569575 DMRTA1Q5VZB9 504 aa16.65■□□□□ 0.26
RAB40C-212ENST00000569575 ZFP2Q6ZN57 461 aa16.65■□□□□ 0.26
RAB40C-212ENST00000569575 OR10AG1Q8NH19 301 aa16.65■□□□□ 0.26
RAB40C-212ENST00000569575 TPPP3Q9BW30 176 aa16.65■□□□□ 0.26
RAB40C-212ENST00000569575 TRAV10A0A0B4J240 114 aa16.64■□□□□ 0.25
RAB40C-212ENST00000569575 A0A1B0GUT8 65 aa16.64■□□□□ 0.25
RAB40C-212ENST00000569575 A0A1B0GW15 77 aa16.64■□□□□ 0.25
RAB40C-212ENST00000569575 M0R381 172 aa16.64■□□□□ 0.25
RAB40C-212ENST00000569575 RHODO00212 210 aa16.64■□□□□ 0.25
RAB40C-212ENST00000569575 TRGC1P0CF51 173 aa16.64■□□□□ 0.25
RAB40C-212ENST00000569575 OR4C5Q8NGB2 326 aa16.64■□□□□ 0.25
RAB40C-212ENST00000569575 TRAV9-1A0A075B6T8 112 aa16.63■□□□□ 0.25
RAB40C-212ENST00000569575 RS1O15537 224 aa16.63■□□□□ 0.25
RAB40C-212ENST00000569575 NANOS2P60321 138 aaKnown RBP16.63■□□□□ 0.25
RAB40C-212ENST00000569575 NUP35Q8NFH5 326 aa16.63■□□□□ 0.25
RAB40C-212ENST00000569575 FAM210BQ96KR6 192 aa16.63■□□□□ 0.25
RAB40C-212ENST00000569575 NTF3P20783 257 aa16.62■□□□□ 0.25
RAB40C-212ENST00000569575 RIGQ13278 110 aa16.62■□□□□ 0.25
RAB40C-212ENST00000569575 KCNIP4Q6PIL6 250 aa16.62■□□□□ 0.25
RAB40C-212ENST00000569575 PGLYRP4Q96LB8 373 aa16.62■□□□□ 0.25
RAB40C-212ENST00000569575 AP1S3Q96PC3 154 aa16.62■□□□□ 0.25
RAB40C-212ENST00000569575 HUWE1Q7Z6Z7 4374 aaKnown RBP16.62■□□□□ 0.25
RAB40C-212ENST00000569575 S100A8P05109 93 aa16.61■□□□□ 0.25
RAB40C-212ENST00000569575 CFAP126Q5VTH2 177 aa16.61■□□□□ 0.25
RAB40C-212ENST00000569575 SMIM15Q7Z3B0 74 aa16.61■□□□□ 0.25
RAB40C-212ENST00000569575 RPS10P5Q9NQ39 176 aa16.61■□□□□ 0.25
RAB40C-212ENST00000569575 S100PP25815 95 aa16.6■□□□□ 0.25
RAB40C-212ENST00000569575 Q6ZTC4 211 aa16.6■□□□□ 0.25
RAB40C-212ENST00000569575 ATP5L2Q7Z4Y8 100 aa16.6■□□□□ 0.25
RAB40C-212ENST00000569575 BTF3L4Q96K17 158 aa16.6■□□□□ 0.25
RAB40C-212ENST00000569575 SMIM17P0DL12 118 aa16.59■□□□□ 0.25
RAB40C-212ENST00000569575 TWIST1Q15672 202 aa16.59■□□□□ 0.25
RAB40C-212ENST00000569575 DEFB131BA0A096LNP1 70 aa16.58■□□□□ 0.24
RAB40C-212ENST00000569575 NUPR2A6NF83 97 aa16.58■□□□□ 0.24
RAB40C-212ENST00000569575 POM121L12Q8N7R1 296 aa16.58■□□□□ 0.24
RAB40C-212ENST00000569575 H3BNG1 76 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms