RNA–Protein interactions for RNA: ENST00000569454.1

CDH13-213, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-213ENST00000569454 LINC01545Q5VT33 79 aa4.35□□□□□ -1.71
CDH13-213ENST00000569454 IGFL4Q6B9Z1 124 aa4.35□□□□□ -1.71
CDH13-213ENST00000569454 Q6YL49 198 aa4.35□□□□□ -1.71
CDH13-213ENST00000569454 Q6ZN92 141 aa4.35□□□□□ -1.71
CDH13-213ENST00000569454 Q71RC1 249 aaPredicted RBP4.35□□□□□ -1.71
CDH13-213ENST00000569454 OR8A1Q8NGG7 326 aa4.35□□□□□ -1.71
CDH13-213ENST00000569454 MYOZ3Q8TDC0 251 aa4.35□□□□□ -1.71
CDH13-213ENST00000569454 MRAP2Q96G30 205 aa4.35□□□□□ -1.71
CDH13-213ENST00000569454 FAM19A4Q96LR4 140 aa4.35□□□□□ -1.71
CDH13-213ENST00000569454 UBE2E2Q96LR5 201 aa4.35□□□□□ -1.71
CDH13-213ENST00000569454 PMCHL2Q9BQD1 86 aa4.35□□□□□ -1.71
CDH13-213ENST00000569454 ZNF747Q9BV97 191 aa4.35□□□□□ -1.71
CDH13-213ENST00000569454 KLK15Q9H2R5 256 aa4.35□□□□□ -1.71
CDH13-213ENST00000569454 SIGLEC8Q9NYZ4 499 aa4.35□□□□□ -1.71
CDH13-213ENST00000569454 TRAV2A0A0B4J234 112 aa4.34□□□□□ -1.71
CDH13-213ENST00000569454 M0R381 172 aa4.34□□□□□ -1.71
CDH13-213ENST00000569454 CSN3P07498 182 aa4.34□□□□□ -1.71
CDH13-213ENST00000569454 S100A4P26447 101 aaKnown RBP4.34□□□□□ -1.71
CDH13-213ENST00000569454 G0S2P27469 103 aa4.34□□□□□ -1.71
CDH13-213ENST00000569454 TSPOP30536 169 aa4.34□□□□□ -1.71
CDH13-213ENST00000569454 LEPP41159 167 aa4.34□□□□□ -1.71
CDH13-213ENST00000569454 RPL11P62913 178 aaKnown RBP4.34□□□□□ -1.71
CDH13-213ENST00000569454 LGALS9BQ3B8N2 356 aa4.34□□□□□ -1.71
CDH13-213ENST00000569454 COL5A1-AS1Q5SY13 56 aa4.34□□□□□ -1.71
CDH13-213ENST00000569454 SPANXN1Q5VSR9 72 aa4.34□□□□□ -1.71
CDH13-213ENST00000569454 LGALS9CQ6DKI2 356 aa4.34□□□□□ -1.71
CDH13-213ENST00000569454 Q8N2B8 174 aa4.34□□□□□ -1.71
CDH13-213ENST00000569454 ZFAND2AQ8N6M9 145 aa4.34□□□□□ -1.71
CDH13-213ENST00000569454 WFDC12Q8WWY7 111 aa4.34□□□□□ -1.71
CDH13-213ENST00000569454 AP1S3Q96PC3 154 aa4.34□□□□□ -1.71
CDH13-213ENST00000569454 SNHG12Q9BXW3 62 aa4.34□□□□□ -1.71
CDH13-213ENST00000569454 KRTAP4-9Q9BYQ8 210 aa4.34□□□□□ -1.71
CDH13-213ENST00000569454 A1L4Q6 167 aa4.33□□□□□ -1.72
CDH13-213ENST00000569454 KLLNB2CW77 178 aa4.33□□□□□ -1.72
CDH13-213ENST00000569454 ATP5LO75964 103 aa4.33□□□□□ -1.72
CDH13-213ENST00000569454 DUSP14O95147 198 aaKnown RBP4.33□□□□□ -1.72
CDH13-213ENST00000569454 NXPH4O95158 308 aa4.33□□□□□ -1.72
CDH13-213ENST00000569454 NPYP01303 97 aa4.33□□□□□ -1.72
CDH13-213ENST00000569454 FCER1GP30273 86 aa4.33□□□□□ -1.72
CDH13-213ENST00000569454 IFI27P40305 119 aaPredicted RBP4.33□□□□□ -1.72
CDH13-213ENST00000569454 NUTF2P61970 127 aaKnown RBP4.33□□□□□ -1.72
CDH13-213ENST00000569454 TDRG1Q3Y452 100 aa4.33□□□□□ -1.72
CDH13-213ENST00000569454 SLC25A34Q6PIV7 304 aa4.33□□□□□ -1.72
CDH13-213ENST00000569454 Q8N8P6 123 aa4.33□□□□□ -1.72
CDH13-213ENST00000569454 OR1N2Q8NGR9 330 aa4.33□□□□□ -1.72
CDH13-213ENST00000569454 OR2K2Q8NGT1 345 aa4.33□□□□□ -1.72
CDH13-213ENST00000569454 DCANP1Q8TF63 244 aa4.33□□□□□ -1.72
CDH13-213ENST00000569454 NRGNQ92686 78 aa4.33□□□□□ -1.72
CDH13-213ENST00000569454 RNF185Q96GF1 192 aa4.33□□□□□ -1.72
CDH13-213ENST00000569454 C20orf173Q96LM9 149 aa4.33□□□□□ -1.72
CDH13-213ENST00000569454 C20orf78Q9BR46 151 aa4.33□□□□□ -1.72
CDH13-213ENST00000569454 DPH3P1Q9H4G8 78 aa4.33□□□□□ -1.72
CDH13-213ENST00000569454 ZNF702PQ9H963 129 aa4.33□□□□□ -1.72
CDH13-213ENST00000569454 PHLDA3Q9Y5J5 127 aa4.33□□□□□ -1.72
CDH13-213ENST00000569454 PRRC2AP48634 2157 aaKnown RBP4.32□□□□□ -1.72
CDH13-213ENST00000569454 A0A096LNJ9 63 aa4.32□□□□□ -1.72
CDH13-213ENST00000569454 H3BVH4 76 aa4.32□□□□□ -1.72
CDH13-213ENST00000569454 IGLL1P15814 213 aa4.32□□□□□ -1.72
CDH13-213ENST00000569454 RPL32P62910 135 aaKnown RBP4.32□□□□□ -1.72
CDH13-213ENST00000569454 ORMDL2Q53FV1 153 aa4.32□□□□□ -1.72
CDH13-213ENST00000569454 SAMD5Q5TGI4 173 aa4.32□□□□□ -1.72
CDH13-213ENST00000569454 FAM159AQ6UWV7 190 aa4.32□□□□□ -1.72
CDH13-213ENST00000569454 C12orf54Q6X4T0 127 aa4.32□□□□□ -1.72
CDH13-213ENST00000569454 Q6ZS46 218 aa4.32□□□□□ -1.72
CDH13-213ENST00000569454 ZNF575Q86XF7 245 aa4.32□□□□□ -1.72
CDH13-213ENST00000569454 IFI27L1Q96BM0 104 aa4.32□□□□□ -1.72
CDH13-213ENST00000569454 SCRT2Q9NQ03 307 aa4.32□□□□□ -1.72
CDH13-213ENST00000569454 C11orf21Q9P2W6 132 aa4.32□□□□□ -1.72
CDH13-213ENST00000569454 PEMTQ9UBM1 199 aa4.32□□□□□ -1.72
CDH13-213ENST00000569454 GOLT1BQ9Y3E0 138 aa4.32□□□□□ -1.72
CDH13-213ENST00000569454 HERC2O95714 4834 aa4.32□□□□□ -1.72
CDH13-213ENST00000569454 LOC389332A0A1B0GUA5 103 aa4.31□□□□□ -1.72
CDH13-213ENST00000569454 A0A1B0GV90 55 aa4.31□□□□□ -1.72
CDH13-213ENST00000569454 K7EQG2 157 aa4.31□□□□□ -1.72
CDH13-213ENST00000569454 PAX4O43316 350 aa4.31□□□□□ -1.72
CDH13-213ENST00000569454 HOXA3O43365 443 aaPredicted RBP4.31□□□□□ -1.72
CDH13-213ENST00000569454 NCR2O95944 276 aa4.31□□□□□ -1.72
CDH13-213ENST00000569454 SMIM17P0DL12 118 aa4.31□□□□□ -1.72
CDH13-213ENST00000569454 HOXD3P31249 432 aaPredicted RBP4.31□□□□□ -1.72
CDH13-213ENST00000569454 KIR3DS1Q14943 382 aa4.31□□□□□ -1.72
CDH13-213ENST00000569454 FOXI2Q6ZQN5 318 aa4.31□□□□□ -1.72
CDH13-213ENST00000569454 ATOH7Q8N100 152 aa4.31□□□□□ -1.72
CDH13-213ENST00000569454 SYT8Q8NBV8 401 aa4.31□□□□□ -1.72
CDH13-213ENST00000569454 C4orf3Q8WVX3 66 aa4.31□□□□□ -1.72
CDH13-213ENST00000569454 Q96MF0 132 aa4.31□□□□□ -1.72
CDH13-213ENST00000569454 SMIM2Q9BVW6 85 aa4.31□□□□□ -1.72
CDH13-213ENST00000569454 NSD1Q96L73 2696 aaPredicted RBP4.3□□□□□ -1.72
CDH13-213ENST00000569454 VPS13CQ709C8 3753 aa4.3□□□□□ -1.72
CDH13-213ENST00000569454 MGAM2Q2M2H8 2515 aa4.3□□□□□ -1.72
CDH13-213ENST00000569454 ACANP16112 2415 aa4.3□□□□□ -1.72
CDH13-213ENST00000569454 TRGV11A0A075B6L2 103 aa4.3□□□□□ -1.72
CDH13-213ENST00000569454 MUC21A0A0G2JKD1 596 aa4.3□□□□□ -1.72
CDH13-213ENST00000569454 A0A0J9YX75 114 aa4.3□□□□□ -1.72
CDH13-213ENST00000569454 MUC21A0A140T8X8 626 aa4.3□□□□□ -1.72
CDH13-213ENST00000569454 C7orf71A4D174 169 aa4.3□□□□□ -1.72
CDH13-213ENST00000569454 TCAPO15273 167 aa4.3□□□□□ -1.72
CDH13-213ENST00000569454 DLEU1O43261 78 aa4.3□□□□□ -1.72
CDH13-213ENST00000569454 COX8AP10176 69 aa4.3□□□□□ -1.72
CDH13-213ENST00000569454 HLA-DRB4P13762 266 aa4.3□□□□□ -1.72
CDH13-213ENST00000569454 EVI2AP22794 236 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms