RNA–Protein interactions for RNA: ENST00000569278.1

CHRFAM7A-206, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 3

Gene CHRFAM7A, Length 464 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-206ENST00000569278 ESDP10768 282 aa8.07□□□□□ -1.12
CHRFAM7A-206ENST00000569278 TFPI2P48307 235 aa8.07□□□□□ -1.12
CHRFAM7A-206ENST00000569278 AKR1D1P51857 326 aa8.07□□□□□ -1.12
CHRFAM7A-206ENST00000569278 HIST1H1AQ02539 215 aaPredicted RBP8.07□□□□□ -1.12
CHRFAM7A-206ENST00000569278 RBMY1FQ15415 496 aaKnown RBP8.07□□□□□ -1.12
CHRFAM7A-206ENST00000569278 TMEM78Q5T7P6 136 aa8.07□□□□□ -1.12
CHRFAM7A-206ENST00000569278 OR2D3Q8NGH3 330 aa8.07□□□□□ -1.12
CHRFAM7A-206ENST00000569278 TMEM18Q96B42 140 aa8.07□□□□□ -1.12
CHRFAM7A-206ENST00000569278 C16orf92Q96LL3 132 aa8.07□□□□□ -1.12
CHRFAM7A-206ENST00000569278 NEU1Q99519 415 aa8.07□□□□□ -1.12
CHRFAM7A-206ENST00000569278 RHPN1-AS1Q9BWJ2 59 aa8.07□□□□□ -1.12
CHRFAM7A-206ENST00000569278 NRN1Q9NPD7 142 aa8.07□□□□□ -1.12
CHRFAM7A-206ENST00000569278 MUC4Q99102 2169 aa8.07□□□□□ -1.12
CHRFAM7A-206ENST00000569278 IGKV3-7A0A075B6H7 116 aa8.06□□□□□ -1.12
CHRFAM7A-206ENST00000569278 SNURFLB1AK76 121 aa8.06□□□□□ -1.12
CHRFAM7A-206ENST00000569278 CA1P00915 261 aaPredicted RBP8.06□□□□□ -1.12
CHRFAM7A-206ENST00000569278 APCSP02743 223 aa8.06□□□□□ -1.12
CHRFAM7A-206ENST00000569278 CRISP2P16562 243 aa8.06□□□□□ -1.12
CHRFAM7A-206ENST00000569278 HBBP68871 147 aa8.06□□□□□ -1.12
CHRFAM7A-206ENST00000569278 PRR27Q6MZM9 219 aa8.06□□□□□ -1.12
CHRFAM7A-206ENST00000569278 TMEM136Q6ZRR5 245 aa8.06□□□□□ -1.12
CHRFAM7A-206ENST00000569278 RPH3ALQ9UNE2 315 aa8.06□□□□□ -1.12
CHRFAM7A-206ENST00000569278 TRAV2A0A0B4J234 112 aa8.05□□□□□ -1.12
CHRFAM7A-206ENST00000569278 A0A1B0GUT8 65 aa8.05□□□□□ -1.12
CHRFAM7A-206ENST00000569278 TMEM189A5PLL7 270 aa8.05□□□□□ -1.12
CHRFAM7A-206ENST00000569278 H3BTX0 84 aa8.05□□□□□ -1.12
CHRFAM7A-206ENST00000569278 M0R3E3 92 aa8.05□□□□□ -1.12
CHRFAM7A-206ENST00000569278 RTL8CO15255 209 aa8.05□□□□□ -1.12
CHRFAM7A-206ENST00000569278 ZNF138P52744 262 aa8.05□□□□□ -1.12
CHRFAM7A-206ENST00000569278 S100A12P80511 92 aa8.05□□□□□ -1.12
CHRFAM7A-206ENST00000569278 ANKRD39Q53RE8 183 aa8.05□□□□□ -1.12
CHRFAM7A-206ENST00000569278 Q6ZTC4 211 aa8.05□□□□□ -1.12
CHRFAM7A-206ENST00000569278 HIST3H2BBQ8N257 126 aa8.05□□□□□ -1.12
CHRFAM7A-206ENST00000569278 GATD1Q8NB37 220 aa8.05□□□□□ -1.12
CHRFAM7A-206ENST00000569278 OR10J6PQ8NGY7 276 aa8.05□□□□□ -1.12
CHRFAM7A-206ENST00000569278 X6R8D5 127 aa8.05□□□□□ -1.12
CHRFAM7A-206ENST00000569278 IGHV4-28A0A0C4DH34 117 aa8.04□□□□□ -1.12
CHRFAM7A-206ENST00000569278 A0A1B0GXF2 115 aa8.04□□□□□ -1.12
CHRFAM7A-206ENST00000569278 IGLL5B9A064 214 aa8.04□□□□□ -1.12
CHRFAM7A-206ENST00000569278 SNRPCP09234 159 aaKnown RBP8.04□□□□□ -1.12
CHRFAM7A-206ENST00000569278 NHLRC2Q8NBF2 726 aa8.04□□□□□ -1.12
CHRFAM7A-206ENST00000569278 ZC2HC1AQ96GY0 325 aa8.04□□□□□ -1.12
CHRFAM7A-206ENST00000569278 CELA1Q9UNI1 258 aa8.04□□□□□ -1.12
CHRFAM7A-206ENST00000569278 TRAV8-1A0A0A6YYK1 113 aa8.03□□□□□ -1.12
CHRFAM7A-206ENST00000569278 TRAV8-2A0A0B4J237 113 aa8.03□□□□□ -1.12
CHRFAM7A-206ENST00000569278 RAB4AP20338 218 aa8.03□□□□□ -1.12
CHRFAM7A-206ENST00000569278 TCTAP57738 103 aa8.03□□□□□ -1.12
CHRFAM7A-206ENST00000569278 DEFB131AP59861 70 aa8.03□□□□□ -1.12
CHRFAM7A-206ENST00000569278 RAB4BP61018 213 aa8.03□□□□□ -1.12
CHRFAM7A-206ENST00000569278 TCF24Q7RTU0 167 aa8.03□□□□□ -1.12
CHRFAM7A-206ENST00000569278 TRPT1Q86TN4 253 aaKnown RBP8.03□□□□□ -1.12
CHRFAM7A-206ENST00000569278 ODF3Q96PU9 254 aa8.03□□□□□ -1.12
CHRFAM7A-206ENST00000569278 MS4A6AQ9H2W1 248 aa8.03□□□□□ -1.12
CHRFAM7A-206ENST00000569278 IGHV4-4A0A075B6R2 117 aa8.02□□□□□ -1.13
CHRFAM7A-206ENST00000569278 IGHV3-66A0A0C4DH42 116 aa8.02□□□□□ -1.13
CHRFAM7A-206ENST00000569278 SOCS3O14543 225 aa8.02□□□□□ -1.13
CHRFAM7A-206ENST00000569278 HLA-DMBP28068 263 aa8.02□□□□□ -1.13
CHRFAM7A-206ENST00000569278 CRIP1P50238 77 aa8.02□□□□□ -1.13
CHRFAM7A-206ENST00000569278 SNRPD3P62318 126 aaKnown RBP8.02□□□□□ -1.13
CHRFAM7A-206ENST00000569278 ZNF493Q6ZR52 646 aa8.02□□□□□ -1.13
CHRFAM7A-206ENST00000569278 BAGE3Q86Y29 109 aa8.02□□□□□ -1.13
CHRFAM7A-206ENST00000569278 CSNK1G2-AS1Q8NCQ2 148 aa8.02□□□□□ -1.13
CHRFAM7A-206ENST00000569278 GTSF1Q8WW33 167 aa8.02□□□□□ -1.13
CHRFAM7A-206ENST00000569278 SGK494Q96LW2 274 aa8.02□□□□□ -1.13
CHRFAM7A-206ENST00000569278 CNFNQ9BYD5 112 aa8.02□□□□□ -1.13
CHRFAM7A-206ENST00000569278 AGPAT4-IT1Q9H0P7 198 aa8.02□□□□□ -1.13
CHRFAM7A-206ENST00000569278 AMBPP02760 352 aa8.01□□□□□ -1.13
CHRFAM7A-206ENST00000569278 MED14OSP0DP75 135 aa8.01□□□□□ -1.13
CHRFAM7A-206ENST00000569278 PMCHP20382 165 aa8.01□□□□□ -1.13
CHRFAM7A-206ENST00000569278 CMC4P56277 68 aaPredicted RBP8.01□□□□□ -1.13
CHRFAM7A-206ENST00000569278 TCL1AP56279 114 aa8.01□□□□□ -1.13
CHRFAM7A-206ENST00000569278 MRPL54Q6P161 138 aaKnown RBP8.01□□□□□ -1.13
CHRFAM7A-206ENST00000569278 LINC00336Q6ZUF6 198 aa8.01□□□□□ -1.13
CHRFAM7A-206ENST00000569278 VGLL1Q99990 258 aa8.01□□□□□ -1.13
CHRFAM7A-206ENST00000569278 TRAV21A0A0B4J279 112 aa8□□□□□ -1.13
CHRFAM7A-206ENST00000569278 KNCNA6PVL3 124 aa8□□□□□ -1.13
CHRFAM7A-206ENST00000569278 K7EQG2 157 aa8□□□□□ -1.13
CHRFAM7A-206ENST00000569278 SH2D1AO60880 128 aa8□□□□□ -1.13
CHRFAM7A-206ENST00000569278 DUSP14O95147 198 aaKnown RBP8□□□□□ -1.13
CHRFAM7A-206ENST00000569278 PPBPP02775 128 aa8□□□□□ -1.13
CHRFAM7A-206ENST00000569278 RPL11P62913 178 aaKnown RBP8□□□□□ -1.13
CHRFAM7A-206ENST00000569278 C12orf74Q32Q52 190 aa8□□□□□ -1.13
CHRFAM7A-206ENST00000569278 ZNF738Q8NE65 137 aa8□□□□□ -1.13
CHRFAM7A-206ENST00000569278 PGLYRP4Q96LB8 373 aa8□□□□□ -1.13
CHRFAM7A-206ENST00000569278 C12orf57Q99622 126 aa8□□□□□ -1.13
CHRFAM7A-206ENST00000569278 HIST1H2BLQ99880 126 aa8□□□□□ -1.13
CHRFAM7A-206ENST00000569278 FAT1Q14517 4588 aa8□□□□□ -1.13
CHRFAM7A-206ENST00000569278 IGKV2-40A0A087WW87 121 aaPredicted RBP7.99□□□□□ -1.13
CHRFAM7A-206ENST00000569278 ZNF705FA8MVS1 300 aaPredicted RBP7.99□□□□□ -1.13
CHRFAM7A-206ENST00000569278 IGKV2D-40P01614 121 aaPredicted RBP7.99□□□□□ -1.13
CHRFAM7A-206ENST00000569278 CTRLP40313 264 aa7.99□□□□□ -1.13
CHRFAM7A-206ENST00000569278 CACNG7P62955 275 aa7.99□□□□□ -1.13
CHRFAM7A-206ENST00000569278 JOSD1Q15040 202 aaPredicted RBP7.99□□□□□ -1.13
CHRFAM7A-206ENST00000569278 OR8A1Q8NGG7 326 aa7.99□□□□□ -1.13
CHRFAM7A-206ENST00000569278 OR10D4PQ8NGN7 298 aa7.99□□□□□ -1.13
CHRFAM7A-206ENST00000569278 DCANP1Q8TF63 244 aa7.99□□□□□ -1.13
CHRFAM7A-206ENST00000569278 CHCHD1Q96BP2 118 aaKnown RBP7.99□□□□□ -1.13
CHRFAM7A-206ENST00000569278 LAMTOR2Q9Y2Q5 125 aa7.99□□□□□ -1.13
CHRFAM7A-206ENST00000569278 NACAE9PAV3 2078 aa7.98□□□□□ -1.13
CHRFAM7A-206ENST00000569278 TRAV10A0A0B4J240 114 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms