RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 DEFB130BP0DP73 79 aa10.29□□□□□ -0.76
COMMD4-225ENST00000569245 DEFB130AP0DP74 79 aa10.29□□□□□ -0.76
COMMD4-225ENST00000569245 RPS20P60866 119 aaKnown RBP10.29□□□□□ -0.76
COMMD4-225ENST00000569245 TDRG1Q3Y452 100 aa10.29□□□□□ -0.76
COMMD4-225ENST00000569245 OR2D3Q8NGH3 330 aa10.29□□□□□ -0.76
COMMD4-225ENST00000569245 EPPK1P58107 5090 aaKnown RBP10.29□□□□□ -0.76
COMMD4-225ENST00000569245 LYRM9A8MSI8 78 aa10.28□□□□□ -0.76
COMMD4-225ENST00000569245 A8MWL6 223 aa10.28□□□□□ -0.76
COMMD4-225ENST00000569245 CXCL1P09341 107 aa10.28□□□□□ -0.76
COMMD4-225ENST00000569245 RPL19P84098 196 aaKnown RBP10.28□□□□□ -0.76
COMMD4-225ENST00000569245 ZNF575Q86XF7 245 aa10.28□□□□□ -0.76
COMMD4-225ENST00000569245 C16orf74Q96GX8 76 aa10.28□□□□□ -0.76
COMMD4-225ENST00000569245 KCNS1Q96KK3 526 aa10.28□□□□□ -0.76
COMMD4-225ENST00000569245 IMMP2LQ96T52 175 aa10.28□□□□□ -0.76
COMMD4-225ENST00000569245 LINC00467Q9BRT7 94 aa10.28□□□□□ -0.76
COMMD4-225ENST00000569245 IL36BQ9NZH7 164 aa10.28□□□□□ -0.76
COMMD4-225ENST00000569245 IGHV1OR15-1A0A075B7D0 117 aa10.27□□□□□ -0.77
COMMD4-225ENST00000569245 XKRY2A2RUG3 117 aa10.27□□□□□ -0.77
COMMD4-225ENST00000569245 FAM231BA6NCW3 169 aa10.27□□□□□ -0.77
COMMD4-225ENST00000569245 ANXA2RQ3ZCQ2 193 aa10.27□□□□□ -0.77
COMMD4-225ENST00000569245 FAM159AQ6UWV7 190 aa10.27□□□□□ -0.77
COMMD4-225ENST00000569245 TSKUQ8WUA8 353 aa10.27□□□□□ -0.77
COMMD4-225ENST00000569245 PYGO2Q9BRQ0 406 aa10.27□□□□□ -0.77
COMMD4-225ENST00000569245 GFRA4Q9GZZ7 299 aa10.27□□□□□ -0.77
COMMD4-225ENST00000569245 VPS13DQ5THJ4 4388 aa10.27□□□□□ -0.77
COMMD4-225ENST00000569245 SMIM27A0A1W2PRY6 76 aa10.26□□□□□ -0.77
COMMD4-225ENST00000569245 FOXA3P55318 350 aaPredicted RBP10.26□□□□□ -0.77
COMMD4-225ENST00000569245 MUC21Q5SSG8 566 aa10.26□□□□□ -0.77
COMMD4-225ENST00000569245 DNLZQ5SXM8 178 aa10.26□□□□□ -0.77
COMMD4-225ENST00000569245 ZNF493Q6ZR52 646 aa10.26□□□□□ -0.77
COMMD4-225ENST00000569245 NAGKQ9UJ70 344 aa10.26□□□□□ -0.77
COMMD4-225ENST00000569245 TIMM8BQ9Y5J9 83 aaPredicted RBP10.26□□□□□ -0.77
COMMD4-225ENST00000569245 KMT2AQ03164 3969 aa10.25□□□□□ -0.77
COMMD4-225ENST00000569245 TMSB15BA0A087X1C1 80 aa10.25□□□□□ -0.77
COMMD4-225ENST00000569245 P0DMU3 169 aa10.25□□□□□ -0.77
COMMD4-225ENST00000569245 FAM231AP0DMU4 169 aa10.25□□□□□ -0.77
COMMD4-225ENST00000569245 FAM231CP0DMU5 169 aa10.25□□□□□ -0.77
COMMD4-225ENST00000569245 TMEM263Q8WUH6 116 aaKnown RBP10.25□□□□□ -0.77
COMMD4-225ENST00000569245 FAM210BQ96KR6 192 aa10.25□□□□□ -0.77
COMMD4-225ENST00000569245 NOP10Q9NPE3 64 aaKnown RBP10.25□□□□□ -0.77
COMMD4-225ENST00000569245 SMCO4Q9NRQ5 59 aa10.25□□□□□ -0.77
COMMD4-225ENST00000569245 PLAC8L1A1L4L8 177 aa10.24□□□□□ -0.77
COMMD4-225ENST00000569245 SCO1O75880 301 aa10.24□□□□□ -0.77
COMMD4-225ENST00000569245 TYMSP04818 313 aa10.24□□□□□ -0.77
COMMD4-225ENST00000569245 IGLC6P0CF74 106 aa10.24□□□□□ -0.77
COMMD4-225ENST00000569245 KCNIP4Q6PIL6 250 aa10.24□□□□□ -0.77
COMMD4-225ENST00000569245 GTSF1Q8WW33 167 aa10.24□□□□□ -0.77
COMMD4-225ENST00000569245 NAT8BQ9UHF3 227 aa10.24□□□□□ -0.77
COMMD4-225ENST00000569245 A0A1W2PPQ1 181 aa10.23□□□□□ -0.77
COMMD4-225ENST00000569245 GRIFINA4D1Z8 144 aa10.23□□□□□ -0.77
COMMD4-225ENST00000569245 F5H768 121 aa10.23□□□□□ -0.77
COMMD4-225ENST00000569245 GNRH2O43555 120 aa10.23□□□□□ -0.77
COMMD4-225ENST00000569245 MED14OSP0DP75 135 aa10.23□□□□□ -0.77
COMMD4-225ENST00000569245 GZMBP10144 247 aa10.23□□□□□ -0.77
COMMD4-225ENST00000569245 TMEM88Q6PEY1 159 aa10.23□□□□□ -0.77
COMMD4-225ENST00000569245 RNASE8Q8TDE3 154 aaKnown RBP10.23□□□□□ -0.77
COMMD4-225ENST00000569245 SSBP4Q9BWG4 385 aaPredicted RBP10.23□□□□□ -0.77
COMMD4-225ENST00000569245 TRGV11A0A075B6L2 103 aa10.22□□□□□ -0.77
COMMD4-225ENST00000569245 TRAV9-1A0A075B6T8 112 aa10.22□□□□□ -0.77
COMMD4-225ENST00000569245 CBY3A6NI87 242 aa10.22□□□□□ -0.77
COMMD4-225ENST00000569245 HIGD1CA8MV81 97 aa10.22□□□□□ -0.77
COMMD4-225ENST00000569245 SNURFLB1AK76 121 aa10.22□□□□□ -0.77
COMMD4-225ENST00000569245 S100PP25815 95 aa10.22□□□□□ -0.77
COMMD4-225ENST00000569245 ASIPP42127 132 aa10.22□□□□□ -0.77
COMMD4-225ENST00000569245 CBLN2Q8IUK8 224 aa10.22□□□□□ -0.77
COMMD4-225ENST00000569245 UBE2DNLQ8IWF7 75 aa10.22□□□□□ -0.77
COMMD4-225ENST00000569245 NUP35Q8NFH5 326 aa10.22□□□□□ -0.77
COMMD4-225ENST00000569245 TP53TG3Q9ULZ0 132 aa10.22□□□□□ -0.77
COMMD4-225ENST00000569245 IGHV3-16A0A0C4DH30 117 aa10.21□□□□□ -0.77
COMMD4-225ENST00000569245 SNAI2O43623 268 aa10.21□□□□□ -0.77
COMMD4-225ENST00000569245 ATP5G1P05496 136 aa10.21□□□□□ -0.77
COMMD4-225ENST00000569245 OR5AL1P0C617 328 aa10.21□□□□□ -0.77
COMMD4-225ENST00000569245 CTRLP40313 264 aa10.21□□□□□ -0.77
COMMD4-225ENST00000569245 TCL1AP56279 114 aa10.21□□□□□ -0.77
COMMD4-225ENST00000569245 FAM3BP58499 235 aaPredicted RBP10.21□□□□□ -0.77
COMMD4-225ENST00000569245 ELOBQ15370 118 aa10.21□□□□□ -0.77
COMMD4-225ENST00000569245 POM121L12Q8N7R1 296 aa10.21□□□□□ -0.77
COMMD4-225ENST00000569245 FER1L6-AS1Q8NA97 138 aa10.21□□□□□ -0.77
COMMD4-225ENST00000569245 YPEL4Q96NS1 127 aa10.21□□□□□ -0.77
COMMD4-225ENST00000569245 SCRT2Q9NQ03 307 aa10.21□□□□□ -0.77
COMMD4-225ENST00000569245 F2Z2F3 143 aa10.2□□□□□ -0.78
COMMD4-225ENST00000569245 ARMS2P0C7Q2 107 aa10.2□□□□□ -0.78
COMMD4-225ENST00000569245 RNASE3P12724 160 aaKnown RBP10.2□□□□□ -0.78
COMMD4-225ENST00000569245 S100A4P26447 101 aaKnown RBP10.2□□□□□ -0.78
COMMD4-225ENST00000569245 BTF3L4Q96K17 158 aa10.2□□□□□ -0.78
COMMD4-225ENST00000569245 URGCP-MRPS24S4R325 110 aa10.2□□□□□ -0.78
COMMD4-225ENST00000569245 TRBV24-1A0A075B6N3 115 aa10.19□□□□□ -0.78
COMMD4-225ENST00000569245 GAGE12BA1L429 117 aa10.19□□□□□ -0.78
COMMD4-225ENST00000569245 H3BVH4 76 aa10.19□□□□□ -0.78
COMMD4-225ENST00000569245 GAGE7O76087 117 aa10.19□□□□□ -0.78
COMMD4-225ENST00000569245 GAGE12FP0CL80 117 aa10.19□□□□□ -0.78
COMMD4-225ENST00000569245 GAGE12GP0CL81 117 aa10.19□□□□□ -0.78
COMMD4-225ENST00000569245 GAGE12IP0CL82 117 aa10.19□□□□□ -0.78
COMMD4-225ENST00000569245 WDR73Q6P4I2 378 aa10.19□□□□□ -0.78
COMMD4-225ENST00000569245 LYZL1Q6UWQ5 148 aa10.19□□□□□ -0.78
COMMD4-225ENST00000569245 C11orf72Q8NBR9 251 aa10.19□□□□□ -0.78
COMMD4-225ENST00000569245 PGLYRP4Q96LB8 373 aa10.19□□□□□ -0.78
COMMD4-225ENST00000569245 C9orf85Q96MD7 179 aa10.19□□□□□ -0.78
COMMD4-225ENST00000569245 CNFNQ9BYD5 112 aa10.19□□□□□ -0.78
COMMD4-225ENST00000569245 MDFICQ9P1T7 246 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms