RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-209ENST00000569243 NDUFB11Q9NX14 153 aa0.77□□□□□ -2.29
UBR1-209ENST00000569243 PRO2289Q9P1D8 64 aa0.77□□□□□ -2.29
UBR1-209ENST00000569243 SLIT2O94813 1529 aa0.77□□□□□ -2.29
UBR1-209ENST00000569243 TTC37Q6PGP7 1564 aa0.77□□□□□ -2.29
UBR1-209ENST00000569243 CC2D2AQ9P2K1 1620 aa0.77□□□□□ -2.29
UBR1-209ENST00000569243 USP54Q70EL1 1684 aa0.77□□□□□ -2.29
UBR1-209ENST00000569243 AKAP12Q02952 1782 aa0.77□□□□□ -2.29
UBR1-209ENST00000569243 TRPM7Q96QT4 1865 aa0.77□□□□□ -2.29
UBR1-209ENST00000569243 MCM3APO60318 1980 aa0.77□□□□□ -2.29
UBR1-209ENST00000569243 FREM3P0C091 2139 aa0.77□□□□□ -2.29
UBR1-209ENST00000569243 UNC13CQ8NB66 2214 aa0.77□□□□□ -2.29
UBR1-209ENST00000569243 EML5Q05BV3 1969 aa0.76□□□□□ -2.29
UBR1-209ENST00000569243 STRCQ7RTU9 1775 aa0.76□□□□□ -2.29
UBR1-209ENST00000569243 COL24A1Q17RW2 1714 aa0.76□□□□□ -2.29
UBR1-209ENST00000569243 BCORL1Q5H9F3 1711 aa0.76□□□□□ -2.29
UBR1-209ENST00000569243 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.76□□□□□ -2.29
UBR1-209ENST00000569243 ROBO1Q9Y6N7 1651 aa0.76□□□□□ -2.29
UBR1-209ENST00000569243 LRP5O75197 1615 aa0.76□□□□□ -2.29
UBR1-209ENST00000569243 NRKQ7Z2Y5 1582 aa0.76□□□□□ -2.29
UBR1-209ENST00000569243 RB1CC1Q8TDY2 1594 aa0.76□□□□□ -2.29
UBR1-209ENST00000569243 MAGI1Q96QZ7 1491 aaPredicted RBP0.76□□□□□ -2.29
UBR1-209ENST00000569243 YPEL1O60688 119 aa0.76□□□□□ -2.29
UBR1-209ENST00000569243 NDUFB6O95139 128 aa0.76□□□□□ -2.29
UBR1-209ENST00000569243 GYPBP06028 91 aa0.76□□□□□ -2.29
UBR1-209ENST00000569243 BAALC-AS2P0C853 105 aa0.76□□□□□ -2.29
UBR1-209ENST00000569243 CXCL8P10145 99 aa0.76□□□□□ -2.29
UBR1-209ENST00000569243 SLC25A6P12236 298 aa0.76□□□□□ -2.29
UBR1-209ENST00000569243 CSAG1Q6PB30 78 aa0.76□□□□□ -2.29
UBR1-209ENST00000569243 ZNF833PQ6ZTB9 187 aa0.76□□□□□ -2.29
UBR1-209ENST00000569243 Q6ZTI0 123 aa0.76□□□□□ -2.29
UBR1-209ENST00000569243 DYNLRB2Q8TF09 96 aa0.76□□□□□ -2.29
UBR1-209ENST00000569243 C10orf82Q8WW14 230 aa0.76□□□□□ -2.29
UBR1-209ENST00000569243 VAMP8Q9BV40 100 aa0.76□□□□□ -2.29
UBR1-209ENST00000569243 LINC00474Q9P2X8 69 aa0.76□□□□□ -2.29
UBR1-209ENST00000569243 FREM1Q5H8C1 2179 aa0.76□□□□□ -2.29
UBR1-209ENST00000569243 MYOFQ9NZM1 2061 aa0.76□□□□□ -2.29
UBR1-209ENST00000569243 AKAP11Q9UKA4 1901 aa0.76□□□□□ -2.29
UBR1-209ENST00000569243 STRCP1A6NGW2 1772 aa0.75□□□□□ -2.29
UBR1-209ENST00000569243 RBBP6Q7Z6E9 1792 aaKnown RBP0.75□□□□□ -2.29
UBR1-209ENST00000569243 CASZ1Q86V15 1759 aa0.75□□□□□ -2.29
UBR1-209ENST00000569243 PXDNLA1KZ92 1463 aa0.75□□□□□ -2.29
UBR1-209ENST00000569243 PTPRMP28827 1452 aa0.75□□□□□ -2.29
UBR1-209ENST00000569243 MED13Q9UHV7 2174 aa0.75□□□□□ -2.29
UBR1-209ENST00000569243 A0A087WSZ3 146 aa0.75□□□□□ -2.29
UBR1-209ENST00000569243 TRAV14DV4A0A0A6YYC5 116 aa0.75□□□□□ -2.29
UBR1-209ENST00000569243 TRBV6-8A0A0A6YYG3 113 aa0.75□□□□□ -2.29
UBR1-209ENST00000569243 TCRBV3S1A0A5B6 114 aa0.75□□□□□ -2.29
UBR1-209ENST00000569243 hADV29S1A0JD25 119 aa0.75□□□□□ -2.29
UBR1-209ENST00000569243 FAM24AA6NFZ4 105 aa0.75□□□□□ -2.29
UBR1-209ENST00000569243 TMEM262E9PQX1 116 aa0.75□□□□□ -2.29
UBR1-209ENST00000569243 GNGT2O14610 69 aa0.75□□□□□ -2.29
UBR1-209ENST00000569243 MRPS14O60783 128 aaKnown RBP0.75□□□□□ -2.29
UBR1-209ENST00000569243 PIPP12273 146 aaPredicted RBP0.75□□□□□ -2.29
UBR1-209ENST00000569243 POLR2JP52435 117 aaKnown RBP0.75□□□□□ -2.29
UBR1-209ENST00000569243 ASB16-AS1Q495Z4 193 aa0.75□□□□□ -2.29
UBR1-209ENST00000569243 PYY3Q5JQD4 70 aa0.75□□□□□ -2.29
UBR1-209ENST00000569243 SPANXN1Q5VSR9 72 aa0.75□□□□□ -2.29
UBR1-209ENST00000569243 SLC48A1Q6P1K1 146 aa0.75□□□□□ -2.29
UBR1-209ENST00000569243 TSLPQ969D9 159 aa0.75□□□□□ -2.29
UBR1-209ENST00000569243 TMEM141Q96I45 108 aa0.75□□□□□ -2.29
UBR1-209ENST00000569243 DPH3P1Q9H4G8 78 aa0.75□□□□□ -2.29
UBR1-209ENST00000569243 PSORS1C2Q9UIG4 136 aa0.75□□□□□ -2.29
UBR1-209ENST00000569243 LINC00312Q9Y6C7 94 aa0.75□□□□□ -2.29
UBR1-209ENST00000569243 V9GYS6 101 aa0.75□□□□□ -2.29
UBR1-209ENST00000569243 MPDZO75970 2070 aa0.75□□□□□ -2.29
UBR1-209ENST00000569243 KIDINS220Q9ULH0 1771 aa0.75□□□□□ -2.29
UBR1-209ENST00000569243 BRWD1Q9NSI6 2320 aa0.75□□□□□ -2.29
UBR1-209ENST00000569243 SMARCA4P51532 1647 aa0.75□□□□□ -2.29
UBR1-209ENST00000569243 RTTNQ86VV8 2226 aa0.74□□□□□ -2.29
UBR1-209ENST00000569243 MED12LQ86YW9 2145 aa0.74□□□□□ -2.29
UBR1-209ENST00000569243 NINQ8N4C6 2090 aa0.74□□□□□ -2.29
UBR1-209ENST00000569243 PLEKHH2Q8IVE3 1493 aa0.74□□□□□ -2.29
UBR1-209ENST00000569243 ABCC5O15440 1437 aa0.74□□□□□ -2.29
UBR1-209ENST00000569243 CPSF1Q10570 1443 aaKnown RBP0.74□□□□□ -2.29
UBR1-209ENST00000569243 CASKIN1Q8WXD9 1431 aa0.74□□□□□ -2.29
UBR1-209ENST00000569243 PHIPQ8WWQ0 1821 aa0.74□□□□□ -2.29
UBR1-209ENST00000569243 UQCRHLA0A096LP55 91 aa0.74□□□□□ -2.29
UBR1-209ENST00000569243 F8W1H4 67 aa0.74□□□□□ -2.29
UBR1-209ENST00000569243 H3BQF6 201 aa0.74□□□□□ -2.29
UBR1-209ENST00000569243 UQCRHP07919 91 aa0.74□□□□□ -2.29
UBR1-209ENST00000569243 IGLC1P0CG04 106 aa0.74□□□□□ -2.29
UBR1-209ENST00000569243 COX7CP15954 63 aa0.74□□□□□ -2.29
UBR1-209ENST00000569243 CNBPP62633 177 aaKnown RBP0.74□□□□□ -2.29
UBR1-209ENST00000569243 PDE6HQ13956 83 aa0.74□□□□□ -2.29
UBR1-209ENST00000569243 ELOBQ15370 118 aa0.74□□□□□ -2.29
UBR1-209ENST00000569243 RHOHQ15669 191 aa0.74□□□□□ -2.29
UBR1-209ENST00000569243 Q1T7F1 81 aa0.74□□□□□ -2.29
UBR1-209ENST00000569243 SPRNQ5BIV9 151 aa0.74□□□□□ -2.29
UBR1-209ENST00000569243 C1orf137Q5JT78 98 aa0.74□□□□□ -2.29
UBR1-209ENST00000569243 RPL7L1Q6DKI1 246 aaKnown RBP0.74□□□□□ -2.29
UBR1-209ENST00000569243 KRTAP26-1Q6PEX3 210 aa0.74□□□□□ -2.29
UBR1-209ENST00000569243 UNQ5815/PRO19632Q6UWF5 114 aa0.74□□□□□ -2.29
UBR1-209ENST00000569243 LYPD5Q6UWN5 251 aa0.74□□□□□ -2.29
UBR1-209ENST00000569243 C2orf82Q6UX34 121 aa0.74□□□□□ -2.29
UBR1-209ENST00000569243 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.74□□□□□ -2.29
UBR1-209ENST00000569243 Q6ZSA8 131 aa0.74□□□□□ -2.29
UBR1-209ENST00000569243 C5orf38Q86SI9 138 aa0.74□□□□□ -2.29
UBR1-209ENST00000569243 SBSPONQ8IVN8 264 aa0.74□□□□□ -2.29
UBR1-209ENST00000569243 C15orf53Q8NAA6 179 aa0.74□□□□□ -2.29
UBR1-209ENST00000569243 FAM213BQ8TBF2 198 aa0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms