RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 ZNF415Q09FC8 603 aa7.51□□□□□ -1.21
CDH3-210ENST00000569117 RHEBQ15382 184 aa7.51□□□□□ -1.21
CDH3-210ENST00000569117 ZNF575Q86XF7 245 aa7.51□□□□□ -1.21
CDH3-210ENST00000569117 SVBPQ8N300 66 aa7.51□□□□□ -1.21
CDH3-210ENST00000569117 OR10G8Q8NGN5 311 aa7.51□□□□□ -1.21
CDH3-210ENST00000569117 TP53TG3Q9ULZ0 132 aa7.51□□□□□ -1.21
CDH3-210ENST00000569117 V9GYV3 84 aa7.51□□□□□ -1.21
CDH3-210ENST00000569117 TMSB15BA0A087X1C1 80 aa7.5□□□□□ -1.21
CDH3-210ENST00000569117 PLAC8L1A1L4L8 177 aa7.5□□□□□ -1.21
CDH3-210ENST00000569117 F5H697 171 aa7.5□□□□□ -1.21
CDH3-210ENST00000569117 PPP1R2P9O14990 202 aa7.5□□□□□ -1.21
CDH3-210ENST00000569117 APOC3P02656 99 aa7.5□□□□□ -1.21
CDH3-210ENST00000569117 PRM2P04554 102 aa7.5□□□□□ -1.21
CDH3-210ENST00000569117 NHLRC4P0CG21 123 aaPredicted RBP7.5□□□□□ -1.21
CDH3-210ENST00000569117 MED14OSP0DP75 135 aa7.5□□□□□ -1.21
CDH3-210ENST00000569117 AZU1P20160 251 aa7.5□□□□□ -1.21
CDH3-210ENST00000569117 TCL1AP56279 114 aa7.5□□□□□ -1.21
CDH3-210ENST00000569117 RNF212Q495C1 297 aa7.5□□□□□ -1.21
CDH3-210ENST00000569117 C11orf68Q9H3H3 251 aaKnown RBP7.5□□□□□ -1.21
CDH3-210ENST00000569117 IL36BQ9NZH7 164 aa7.5□□□□□ -1.21
CDH3-210ENST00000569117 DNAH9Q9NYC9 4486 aa7.5□□□□□ -1.21
CDH3-210ENST00000569117 GRIFINA4D1Z8 144 aa7.49□□□□□ -1.21
CDH3-210ENST00000569117 A8MWL6 223 aa7.49□□□□□ -1.21
CDH3-210ENST00000569117 H3BVH4 76 aa7.49□□□□□ -1.21
CDH3-210ENST00000569117 GNRH2O43555 120 aa7.49□□□□□ -1.21
CDH3-210ENST00000569117 SNAPINO95295 136 aa7.49□□□□□ -1.21
CDH3-210ENST00000569117 MT-ND4LP03901 98 aa7.49□□□□□ -1.21
CDH3-210ENST00000569117 IGLC6P0CF74 106 aa7.49□□□□□ -1.21
CDH3-210ENST00000569117 RNASE3P12724 160 aaKnown RBP7.49□□□□□ -1.21
CDH3-210ENST00000569117 FAM3BP58499 235 aaPredicted RBP7.49□□□□□ -1.21
CDH3-210ENST00000569117 TIRAPP58753 221 aa7.49□□□□□ -1.21
CDH3-210ENST00000569117 TSKUQ8WUA8 353 aa7.49□□□□□ -1.21
CDH3-210ENST00000569117 C9orf85Q96MD7 179 aa7.49□□□□□ -1.21
CDH3-210ENST00000569117 GSN-AS1Q9NRJ2 163 aa7.49□□□□□ -1.21
CDH3-210ENST00000569117 MDFICQ9P1T7 246 aa7.49□□□□□ -1.21
CDH3-210ENST00000569117 COL7A1Q02388 2944 aa7.49□□□□□ -1.21
CDH3-210ENST00000569117 HUWE1Q7Z6Z7 4374 aaKnown RBP7.48□□□□□ -1.21
CDH3-210ENST00000569117 A0A087WWC5 75 aa7.48□□□□□ -1.21
CDH3-210ENST00000569117 FAM231BA6NCW3 169 aa7.48□□□□□ -1.21
CDH3-210ENST00000569117 SNURFLB1AK76 121 aa7.48□□□□□ -1.21
CDH3-210ENST00000569117 SNAI2O43623 268 aa7.48□□□□□ -1.21
CDH3-210ENST00000569117 OR5AL1P0C617 328 aa7.48□□□□□ -1.21
CDH3-210ENST00000569117 GZMBP10144 247 aa7.48□□□□□ -1.21
CDH3-210ENST00000569117 S100A4P26447 101 aaKnown RBP7.48□□□□□ -1.21
CDH3-210ENST00000569117 CTRLP40313 264 aa7.48□□□□□ -1.21
CDH3-210ENST00000569117 DAZ2Q13117 558 aaKnown RBP7.48□□□□□ -1.21
CDH3-210ENST00000569117 FER1L6-AS1Q8NA97 138 aa7.48□□□□□ -1.21
CDH3-210ENST00000569117 CTDSP1Q9GZU7 261 aa7.48□□□□□ -1.21
CDH3-210ENST00000569117 GFRA4Q9GZZ7 299 aa7.48□□□□□ -1.21
CDH3-210ENST00000569117 SCRT2Q9NQ03 307 aa7.48□□□□□ -1.21
CDH3-210ENST00000569117 A0A1W2PPQ1 181 aa7.47□□□□□ -1.21
CDH3-210ENST00000569117 C7orf77A4D0Y5 90 aa7.47□□□□□ -1.21
CDH3-210ENST00000569117 TRIAP1O43715 76 aa7.47□□□□□ -1.21
CDH3-210ENST00000569117 ATP6V1G1O75348 118 aa7.47□□□□□ -1.21
CDH3-210ENST00000569117 GTSF1Q8WW33 167 aa7.47□□□□□ -1.21
CDH3-210ENST00000569117 SPXQ9BT56 116 aa7.47□□□□□ -1.21
CDH3-210ENST00000569117 TMEM242Q9NWH2 141 aa7.47□□□□□ -1.21
CDH3-210ENST00000569117 TIMM8BQ9Y5J9 83 aaPredicted RBP7.47□□□□□ -1.21
CDH3-210ENST00000569117 MUC4Q99102 2169 aa7.47□□□□□ -1.21
CDH3-210ENST00000569117 STAB2Q8WWQ8 2551 aa7.47□□□□□ -1.21
CDH3-210ENST00000569117 TEX48A0A1B0GUV7 120 aa7.46□□□□□ -1.22
CDH3-210ENST00000569117 SMIM27A0A1W2PRY6 76 aa7.46□□□□□ -1.22
CDH3-210ENST00000569117 LYRM9A8MSI8 78 aa7.46□□□□□ -1.22
CDH3-210ENST00000569117 M0R2P5 195 aa7.46□□□□□ -1.22
CDH3-210ENST00000569117 DEFB4AO15263 64 aa7.46□□□□□ -1.22
CDH3-210ENST00000569117 NXPH4O95158 308 aa7.46□□□□□ -1.22
CDH3-210ENST00000569117 ARMS2P0C7Q2 107 aa7.46□□□□□ -1.22
CDH3-210ENST00000569117 FOXA3P55318 350 aaPredicted RBP7.46□□□□□ -1.22
CDH3-210ENST00000569117 LGALS9BQ3B8N2 356 aa7.46□□□□□ -1.22
CDH3-210ENST00000569117 PIK3CD-AS1Q5SR53 167 aa7.46□□□□□ -1.22
CDH3-210ENST00000569117 PTH2Q96A98 100 aa7.46□□□□□ -1.22
CDH3-210ENST00000569117 NDUFAF3Q9BU61 184 aa7.46□□□□□ -1.22
CDH3-210ENST00000569117 CNFNQ9BYD5 112 aa7.46□□□□□ -1.22
CDH3-210ENST00000569117 NOP10Q9NPE3 64 aaKnown RBP7.46□□□□□ -1.22
CDH3-210ENST00000569117 A0A0J9YWU9 116 aa7.45□□□□□ -1.22
CDH3-210ENST00000569117 HIGD1CA8MV81 97 aa7.45□□□□□ -1.22
CDH3-210ENST00000569117 F2Z2F3 143 aa7.45□□□□□ -1.22
CDH3-210ENST00000569117 SPINK4O60575 86 aa7.45□□□□□ -1.22
CDH3-210ENST00000569117 EMP1P54849 157 aa7.45□□□□□ -1.22
CDH3-210ENST00000569117 FAM222AQ5U5X8 452 aa7.45□□□□□ -1.22
CDH3-210ENST00000569117 ZFP82Q8N141 532 aa7.45□□□□□ -1.22
CDH3-210ENST00000569117 LINC00612Q8N6U2 182 aa7.45□□□□□ -1.22
CDH3-210ENST00000569117 OR10AG1Q8NH19 301 aa7.45□□□□□ -1.22
CDH3-210ENST00000569117 IMMP2LQ96T52 175 aa7.45□□□□□ -1.22
CDH3-210ENST00000569117 TPPP3Q9BW30 176 aa7.45□□□□□ -1.22
CDH3-210ENST00000569117 RPS10P5Q9NQ39 176 aa7.45□□□□□ -1.22
CDH3-210ENST00000569117 DKK2Q9UBU2 259 aa7.45□□□□□ -1.22
CDH3-210ENST00000569117 NAT8BQ9UHF3 227 aa7.45□□□□□ -1.22
CDH3-210ENST00000569117 PHLDA3Q9Y5J5 127 aa7.45□□□□□ -1.22
CDH3-210ENST00000569117 PCP4P48539 62 aa7.44□□□□□ -1.22
CDH3-210ENST00000569117 LYZL1Q6UWQ5 148 aa7.44□□□□□ -1.22
CDH3-210ENST00000569117 Q6ZTI0 123 aa7.44□□□□□ -1.22
CDH3-210ENST00000569117 SYT8Q8NBV8 401 aa7.44□□□□□ -1.22
CDH3-210ENST00000569117 RASL10AQ92737 203 aa7.44□□□□□ -1.22
CDH3-210ENST00000569117 MRPL16Q9NX20 251 aaKnown RBP7.44□□□□□ -1.22
CDH3-210ENST00000569117 CELA1Q9UNI1 258 aa7.44□□□□□ -1.22
CDH3-210ENST00000569117 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.44□□□□□ -1.22
CDH3-210ENST00000569117 U3KQK5 164 aa7.44□□□□□ -1.22
CDH3-210ENST00000569117 NACAE9PAV3 2078 aa7.43□□□□□ -1.22
CDH3-210ENST00000569117 IGHV4-4A0A075B6R2 117 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms