RNA–Protein interactions for RNA: ENST00000568329.5

CSK-211, Transcript of C-terminal Src kinase, human

TSL 5

Gene CSK, Length 1,552 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSK-211	ENST00000568329	KPRP	Q5T749	579 aa	Predicted RBP	11.24	□□□□□ -0.61
CSK-211	ENST00000568329	SPANXN1	Q5VSR9	72 aa		11.24	□□□□□ -0.61
CSK-211	ENST00000568329	ZNF493	Q6ZR52	646 aa		11.24	□□□□□ -0.61
CSK-211	ENST00000568329	MRPL18	Q9H0U6	180 aa	Known RBP	11.24	□□□□□ -0.61
CSK-211	ENST00000568329	FABP9	Q0Z7S8	132 aa		11.24	□□□□□ -0.61
CSK-211	ENST00000568329	SMIM15	Q7Z3B0	74 aa		11.24	□□□□□ -0.61
CSK-211	ENST00000568329	TP53TG3	Q9ULZ0	132 aa		11.24	□□□□□ -0.61
CSK-211	ENST00000568329	TMA7	Q9Y2S6	64 aa	Known RBP	11.24	□□□□□ -0.61
CSK-211	ENST00000568329	GIG44	P09565	113 aa	Predicted RBP	11.23	□□□□□ -0.61
CSK-211	ENST00000568329	TRGC1	P0CF51	173 aa		11.23	□□□□□ -0.61
CSK-211	ENST00000568329	ZNF415	Q09FC8	603 aa		11.23	□□□□□ -0.61
CSK-211	ENST00000568329	ZFP82	Q8N141	532 aa		11.23	□□□□□ -0.61
CSK-211	ENST00000568329	C1orf158	Q8N1D5	194 aa		11.23	□□□□□ -0.61
CSK-211	ENST00000568329	OR10AG1	Q8NH19	301 aa		11.23	□□□□□ -0.61
CSK-211	ENST00000568329	C9orf85	Q96MD7	179 aa		11.23	□□□□□ -0.61
CSK-211	ENST00000568329	NXPH4	O95158	308 aa		11.22	□□□□□ -0.61
CSK-211	ENST00000568329	APCS	P02743	223 aa		11.22	□□□□□ -0.61
CSK-211	ENST00000568329	FRMD6-AS1	P0C7T7	363 aa		11.22	□□□□□ -0.61
CSK-211	ENST00000568329	SYT8	Q8NBV8	401 aa		11.22	□□□□□ -0.61
CSK-211	ENST00000568329	TMEM191A	Q9H0A3	160 aa		11.22	□□□□□ -0.61
CSK-211	ENST00000568329	PHOX2A	O14813	284 aa		11.21	□□□□□ -0.61
CSK-211	ENST00000568329	CSNK1G2-AS1	Q8NCQ2	148 aa		11.21	□□□□□ -0.61
CSK-211	ENST00000568329	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	11.21	□□□□□ -0.61
CSK-211	ENST00000568329		A8MZ25	164 aa		11.2	□□□□□ -0.62
CSK-211	ENST00000568329	UBE2C	O00762	179 aa		11.2	□□□□□ -0.62
CSK-211	ENST00000568329	HTN1	P15515	57 aa		11.2	□□□□□ -0.62
CSK-211	ENST00000568329	PIK3CD-AS1	Q5SR53	167 aa		11.2	□□□□□ -0.62
CSK-211	ENST00000568329	MUC21	A0A0G2JKD1	596 aa		11.2	□□□□□ -0.62
CSK-211	ENST00000568329	MUC21	A0A140T8X8	626 aa		11.2	□□□□□ -0.62
CSK-211	ENST00000568329		M0R381	172 aa		11.2	□□□□□ -0.62
CSK-211	ENST00000568329	IGHV4-30-4	P0DP06	118 aa		11.2	□□□□□ -0.62
CSK-211	ENST00000568329	ZNF705A	Q6ZN79	300 aa	Predicted RBP	11.2	□□□□□ -0.62
CSK-211	ENST00000568329	TMEM263	Q8WUH6	116 aa	Known RBP	11.2	□□□□□ -0.62
CSK-211	ENST00000568329	AP1S3	Q96PC3	154 aa		11.2	□□□□□ -0.62
CSK-211	ENST00000568329	SPX	Q9BT56	116 aa		11.2	□□□□□ -0.62
CSK-211	ENST00000568329	MDFIC	Q9P1T7	246 aa		11.2	□□□□□ -0.62
CSK-211	ENST00000568329	DNHD1	Q96M86	4753 aa		11.19	□□□□□ -0.62
CSK-211	ENST00000568329	IGHV3OR16-12	A0A075B7B8	117 aa		11.19	□□□□□ -0.62
CSK-211	ENST00000568329	SST	P61278	116 aa		11.19	□□□□□ -0.62
CSK-211	ENST00000568329	SLA	Q13239	276 aa		11.19	□□□□□ -0.62
CSK-211	ENST00000568329	DMRTA1	Q5VZB9	504 aa		11.19	□□□□□ -0.62
CSK-211	ENST00000568329	PTH2	Q96A98	100 aa		11.19	□□□□□ -0.62
CSK-211	ENST00000568329	NDUFAF3	Q9BU61	184 aa		11.19	□□□□□ -0.62
CSK-211	ENST00000568329	DNAH3	Q8TD57	4116 aa		11.18	□□□□□ -0.62
CSK-211	ENST00000568329	HIST1H2BK	O60814	126 aa		11.18	□□□□□ -0.62
CSK-211	ENST00000568329	HIST1H2BJ	P06899	126 aa		11.18	□□□□□ -0.62
CSK-211	ENST00000568329	HIST1H2BO	P23527	126 aa		11.18	□□□□□ -0.62
CSK-211	ENST00000568329	HIST1H2BB	P33778	126 aa		11.18	□□□□□ -0.62
CSK-211	ENST00000568329	HIST1H2BD	P58876	126 aa		11.18	□□□□□ -0.62
CSK-211	ENST00000568329	HIST1H2BC	P62807	126 aa		11.18	□□□□□ -0.62
CSK-211	ENST00000568329	HIST2H2BE	Q16778	126 aa		11.18	□□□□□ -0.62
CSK-211	ENST00000568329	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	11.18	□□□□□ -0.62
CSK-211	ENST00000568329	FAM104B	Q5XKR9	115 aa		11.18	□□□□□ -0.62
CSK-211	ENST00000568329	HIST1H2BH	Q93079	126 aa		11.18	□□□□□ -0.62
CSK-211	ENST00000568329	HIST1H2BN	Q99877	126 aa		11.18	□□□□□ -0.62
CSK-211	ENST00000568329	HIST1H2BM	Q99879	126 aa		11.18	□□□□□ -0.62
CSK-211	ENST00000568329	MGAM2	Q2M2H8	2515 aa		11.17	□□□□□ -0.62
CSK-211	ENST00000568329	S100A6	P06703	90 aa		11.17	□□□□□ -0.62
CSK-211	ENST00000568329	RRN3P1	Q2M238	152 aa		11.17	□□□□□ -0.62
CSK-211	ENST00000568329	C11orf72	Q8NBR9	251 aa		11.17	□□□□□ -0.62
CSK-211	ENST00000568329	C16orf74	Q96GX8	76 aa		11.17	□□□□□ -0.62
CSK-211	ENST00000568329	RCHY1	Q96PM5	261 aa		11.17	□□□□□ -0.62
CSK-211	ENST00000568329	MSRB1	Q9NZV6	116 aa		11.17	□□□□□ -0.62
CSK-211	ENST00000568329	SMIM9	A6NGZ8	99 aa		11.16	□□□□□ -0.62
CSK-211	ENST00000568329		M0R2P5	195 aa		11.16	□□□□□ -0.62
CSK-211	ENST00000568329	RNASE8	Q8TDE3	154 aa	Known RBP	11.16	□□□□□ -0.62
CSK-211	ENST00000568329	PPBP	P02775	128 aa		11.16	□□□□□ -0.62
CSK-211	ENST00000568329	SMIM17	P0DL12	118 aa		11.16	□□□□□ -0.62
CSK-211	ENST00000568329	ZNF876P	Q49A33	203 aa		11.16	□□□□□ -0.62
CSK-211	ENST00000568329	DPH3P1	Q9H4G8	78 aa		11.16	□□□□□ -0.62
CSK-211	ENST00000568329	GSN-AS1	Q9NRJ2	163 aa		11.16	□□□□□ -0.62
CSK-211	ENST00000568329	EVI2A	P22794	236 aa		11.15	□□□□□ -0.62
CSK-211	ENST00000568329		Q6ZWC4	215 aa		11.15	□□□□□ -0.62
CSK-211	ENST00000568329	AMN1	Q8IY45	258 aa		11.15	□□□□□ -0.62
CSK-211	ENST00000568329	SRI	P30626	198 aa		11.14	□□□□□ -0.63
CSK-211	ENST00000568329	KIAA1644	Q3SXP7	199 aa		11.14	□□□□□ -0.63
CSK-211	ENST00000568329	OR10J3	Q5JRS4	329 aa		11.14	□□□□□ -0.63
CSK-211	ENST00000568329		A8MWV9	139 aa		11.13	□□□□□ -0.63
CSK-211	ENST00000568329	RAB4A	P20338	218 aa		11.13	□□□□□ -0.63
CSK-211	ENST00000568329	DAZ2	Q13117	558 aa	Known RBP	11.13	□□□□□ -0.63
CSK-211	ENST00000568329	LGALS9B	Q3B8N2	356 aa		11.13	□□□□□ -0.63
CSK-211	ENST00000568329	ORMDL3	Q8N138	153 aa		11.13	□□□□□ -0.63
CSK-211	ENST00000568329	IL17D	Q8TAD2	202 aa		11.13	□□□□□ -0.63
CSK-211	ENST00000568329	ALKBH7	Q9BT30	221 aa	Predicted RBP	11.13	□□□□□ -0.63
CSK-211	ENST00000568329	LAMTOR2	Q9Y2Q5	125 aa		11.13	□□□□□ -0.63
CSK-211	ENST00000568329		K7EIL1	84 aa		11.12	□□□□□ -0.63
CSK-211	ENST00000568329	PRB2	P02812	416 aa	Predicted RBP	11.12	□□□□□ -0.63
CSK-211	ENST00000568329	AZU1	P20160	251 aa		11.12	□□□□□ -0.63
CSK-211	ENST00000568329		Q0VG73	95 aa		11.12	□□□□□ -0.63
CSK-211	ENST00000568329	MRPL51	Q4U2R6	128 aa	Known RBP	11.12	□□□□□ -0.63
CSK-211	ENST00000568329	MRAP2	Q96G30	205 aa		11.12	□□□□□ -0.63
CSK-211	ENST00000568329	NOTCH1	P46531	2555 aa		11.12	□□□□□ -0.63
CSK-211	ENST00000568329	NBEAL1	Q6ZS30	2694 aa		11.12	□□□□□ -0.63
CSK-211	ENST00000568329	CKS2	P33552	79 aa		11.11	□□□□□ -0.63
CSK-211	ENST00000568329	COA6	Q5JTJ3	125 aa	Known RBP	11.11	□□□□□ -0.63
CSK-211	ENST00000568329	C14orf178	Q8N769	122 aa	Predicted RBP	11.11	□□□□□ -0.63
CSK-211	ENST00000568329	RASL10A	Q92737	203 aa		11.11	□□□□□ -0.63
CSK-211	ENST00000568329	RNF185	Q96GF1	192 aa		11.11	□□□□□ -0.63
CSK-211	ENST00000568329		U3KQK5	164 aa		11.11	□□□□□ -0.63
CSK-211	ENST00000568329	MUC4	Q99102	2169 aa		11.11	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms